Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23090 Brassica carinata HOM05D003839 ORTHO05D032372 7.1e-32 139.8 63 100.0
BolC5t33664H Brassica oleracea HOM05D003839 ORTHO05D032372 1.3e-12 75.9 45 75.6
C05p49230 Brassica napus HOM05D003839 ORTHO05D032372 3.7e-12 74.3 45 73.3
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 4.8e-12 73.9 53 64.2
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 4.8e-12 73.9 53 64.2
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 1.5e-10 68.9 50 62.0
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-10 67.8 53 56.6
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-09 63.9 50 58.0
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-09 63.9 50 58.0
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 5.0e-09 63.9 50 58.0
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 2.5e-08 61.6 53 49.1
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.5e-08 61.6 53 47.2
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 3.2e-08 61.2 52 55.8
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 3.2e-08 61.2 52 55.8
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 4.2e-08 60.8 52 53.8
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 9.4e-08 59.7 52 53.8
BolC6t35914H Brassica oleracea HOM05D003839 ORTHO05D003352 9.4e-08 59.7 50 50.0
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 9.4e-08 59.7 52 53.8
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-07 59.3 52 53.8
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-07 58.9 52 55.8
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 1.6e-07 58.9 53 52.8
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-07 58.5 51 52.9
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-07 58.5 52 51.9
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-07 58.5 53 49.1
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 2.1e-07 58.5 52 55.8
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 2.1e-07 58.5 52 51.9
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.1e-07 58.5 51 51.0
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 2.7e-07 58.2 52 51.9
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 2.7e-07 58.2 52 51.9
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 2.7e-07 58.2 54 48.1
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-07 58.2 52 51.9
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-07 58.2 54 48.1
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-07 58.2 52 51.9
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 2.7e-07 58.2 53 50.9
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-07 57.8 53 49.1
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 3.6e-07 57.8 53 49.1
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 4.6e-07 57.4 53 47.2
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 4.6e-07 57.4 51 51.0
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 4.6e-07 57.4 53 49.1
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 4.6e-07 57.4 53 52.8
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 4.6e-07 57.4 52 51.9
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 4.6e-07 57.4 52 51.9
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 4.6e-07 57.4 53 45.3
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 6.1e-07 57.0 53 52.8
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 6.1e-07 57.0 53 49.1
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 6.1e-07 57.0 53 52.8
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 6.1e-07 57.0 53 47.2
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 7.9e-07 56.6 52 50.0
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 7.9e-07 56.6 52 51.9
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 7.9e-07 56.6 50 48.0
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 7.9e-07 56.6 52 50.0
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-06 56.2 52 51.9
BolC4t27974H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-06 56.2 50 48.0
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-06 55.8 52 51.9
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-06 55.8 52 51.9
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-06 55.8 59 45.8
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-06 55.8 52 50.0
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-06 55.8 52 50.0
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-06 55.8 59 45.8
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 1.4e-06 55.8 51 52.9
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-06 55.5 52 51.9
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-06 55.5 52 50.0
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-06 55.5 52 50.0
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-06 55.5 52 50.0
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-06 55.5 52 50.0
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-06 55.1 53 45.3
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 2.3e-06 55.1 52 50.0
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 2.3e-06 55.1 53 45.3
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 3.0e-06 54.7 51 51.0
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 3.0e-06 54.7 52 50.0
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 3.0e-06 54.7 53 43.4
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 3.0e-06 54.7 53 43.4
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 3.0e-06 54.7 53 49.1
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 3.9e-06 54.3 51 47.1
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 3.9e-06 54.3 53 49.1
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 3.9e-06 54.3 53 49.1
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 3.9e-06 54.3 53 43.4
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 5.1e-06 53.9 52 48.1
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 5.1e-06 53.9 52 48.1
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 5.1e-06 53.9 52 48.1
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 5.1e-06 53.9 53 45.3
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 6.7e-06 53.5 54 46.3
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 6.7e-06 53.5 54 44.4
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 6.7e-06 53.5 52 48.1
BolC5t34293H Brassica oleracea HOM05D021406 ORTHO05D020172 6.7e-06 53.5 45 53.3
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 8.8e-06 53.1 52 50.0


User provided reference genes

Program Settings