Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23080 Brassica carinata HOM05D009963 ORTHO05D013780 1.4e-217 759.2 360 100.0
BcaB08g34681 Brassica carinata HOM05D009963 ORTHO05D009779 1.2e-123 447.2 315 74.0
BcaB08g35401 Brassica carinata HOM05D009963 ORTHO05D091082 1.9e-89 333.6 216 75.5
BcaB05g23555 Brassica carinata HOM05D009963 ORTHO05D013780 1.8e-87 327.0 237 71.7
BcaB07g33962 Brassica carinata HOM05D009963 ORTHO05D013780 1.4e-68 264.2 236 59.7
BcaB01g01737 Brassica carinata HOM05D009963 ORTHO05D092519 2.6e-62 243.4 149 79.2
BcaB01g01741 Brassica carinata HOM05D009963 ORTHO05D000154 9.9e-62 241.5 181 69.6
BcaB04g18090 Brassica carinata HOM05D009963 ORTHO05D013780 3.9e-58 229.6 130 86.9
BcaB08g35291 Brassica carinata HOM05D009963 ORTHO05D000154 3.2e-52 209.9 123 78.0
BcaB07g33010 Brassica carinata HOM05D009963 ORTHO05D013780 2.5e-49 200.3 99 94.9
BcaB08g35926 Brassica carinata HOM05D009963 ORTHO05D013780 6.9e-47 192.2 228 47.4
BcaC05g27660 Brassica carinata HOM05D009963 ORTHO05D013780 5.9e-46 189.1 125 72.0
C05p36480 Brassica napus HOM05D009963 ORTHO05D013780 5.9e-46 189.1 125 72.0
BcaB05g23007 Brassica carinata HOM05D009963 ORTHO05D000154 2.2e-45 187.2 96 90.6
BcaB01g00737 Brassica carinata HOM05D009963 ORTHO05D013780 4.8e-40 169.5 86 90.7
BcaB04g17264 Brassica carinata HOM05D009963 ORTHO05D013780 8.2e-40 168.7 200 51.5
BcaB08g34993 Brassica carinata HOM05D009963 ORTHO05D013780 5.3e-23 112.8 61 80.3
BcaB04g16946 Brassica carinata HOM05D009963 ORTHO05D023868 9.1e-23 112.1 64 84.4
BcaB03g16537 Brassica carinata HOM05D009963 ORTHO05D023868 4.2e-20 103.2 64 79.7
BcaB06g26581 Brassica carinata HOM05D009963 ORTHO05D023868 1.2e-19 101.7 141 44.0
BcaB06g27697 Brassica carinata HOM05D009963 ORTHO05D023868 7.5e-17 92.4 64 75.0
BolC5t32347H Brassica oleracea HOM05D009963 ORTHO05D013780 1.1e-15 88.6 74 60.8
BcaB04g18322 Brassica carinata HOM05D000365 ORTHO05D000154 1.2e-14 85.1 47 85.1
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-11 75.1 110 36.4
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.0e-11 72.4 319 21.0
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 1.0e-10 72.0 109 35.8
C09p27130 Brassica napus HOM05D007568 ORTHO05D009779 1.0e-10 72.0 109 35.8
BcaB08g35896 Brassica carinata HOM05D009963 ORTHO05D023868 2.3e-10 70.9 50 72.0
A02p32020 Brassica napus HOM05D007568 ORTHO05D009779 4.0e-10 70.1 110 36.4
BraA02t08213Z Brassica rapa HOM05D007568 ORTHO05D009779 4.0e-10 70.1 110 36.4
BolC9t55448H Brassica oleracea HOM05D007568 ORTHO05D009779 5.2e-10 69.7 109 34.9
A03p65180 Brassica napus HOM05D007568 ORTHO05D009779 6.8e-10 69.3 115 32.2
BolC3t14260H Brassica oleracea HOM05D007568 ORTHO05D009779 1.5e-09 68.2 109 34.9
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 2.0e-09 67.8 115 33.0
BcaC01g06154 Brassica carinata HOM05D007568 ORTHO05D009779 2.6e-09 67.4 111 36.0
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 3.4e-09 67.0 107 36.4
BcaC02g08832 Brassica carinata HOM05D007568 ORTHO05D009779 4.4e-09 66.6 70 44.3
BcaC09g50027 Brassica carinata HOM05D007568 ORTHO05D009779 9.8e-09 65.5 109 33.0
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 1.3e-08 65.1 107 31.8
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 1.3e-08 65.1 112 33.9
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.7e-08 64.7 219 27.9
A03p66080 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-08 64.7 109 33.0
A05p17030 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-08 64.7 109 33.0
BolC9t56300H Brassica oleracea HOM05D009963 ORTHO05D013780 2.2e-08 64.3 40 70.0
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 3.7e-08 63.5 107 31.8
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 3.7e-08 63.5 107 31.8
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 3.7e-08 63.5 112 33.9
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.3e-08 62.8 219 27.4
BcaB04g18340 Brassica carinata HOM05D007568 ORTHO05D009779 6.3e-08 62.8 103 33.0
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 1.1e-07 62.0 107 32.7
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.4e-07 61.6 219 26.9
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.4e-07 61.6 219 26.9
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 1.4e-07 61.6 219 26.9
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.4e-07 61.6 219 26.9
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.8e-07 61.2 219 26.9
BolC4t23434H Brassica oleracea HOM05D007568 ORTHO05D009779 1.8e-07 61.2 72 38.9
BraA03t15576Z Brassica rapa HOM05D007568 ORTHO05D009779 1.8e-07 61.2 81 35.8
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.4e-07 60.8 219 25.6
A03p66230 Brassica napus HOM05D007568 ORTHO05D009779 2.4e-07 60.8 115 31.3
BraA03t15678Z Brassica rapa HOM05D007568 ORTHO05D009779 2.4e-07 60.8 115 31.3
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 5.4e-07 59.7 109 33.0
BcaB04g18026 Brassica carinata HOM05D007568 ORTHO05D009779 9.1e-07 58.9 112 31.2
BolC8t51027H Brassica oleracea HOM05D007568 ORTHO05D009779 1.6e-06 58.2 114 31.6
A08p24970 Brassica napus HOM05D007568 ORTHO05D009779 2.0e-06 57.8 108 30.6
C07p00760 Brassica napus HOM05D007568 ORTHO05D009779 2.7e-06 57.4 98 32.7
BraA09t40709Z Brassica rapa HOM05D007568 ORTHO05D009779 3.5e-06 57.0 112 32.1
C06p35410 Brassica napus HOM05D000353 ORTHO05D000174 5.9e-06 56.2 186 24.2
BolC2t10349H Brassica oleracea HOM05D007568 ORTHO05D009779 5.9e-06 56.2 92 33.7
BolC8t50703H Brassica oleracea HOM05D000353 ORTHO05D000174 7.7e-06 55.8 186 25.3


User provided reference genes

Program Settings