Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23079 Brassica carinata HOM05D000353 ORTHO05D013242 2.2e-36 155.2 84 100.0
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 8.0e-31 136.7 81 90.1
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 8.0e-31 136.7 81 90.1
BcaNung05687 Brassica carinata HOM05D000353 ORTHO05D013242 1.3e-28 129.4 77 87.0
BcaB06g26938 Brassica carinata HOM05D000353 ORTHO05D013242 1.1e-27 126.3 83 83.1
BcaB04g18091 Brassica carinata HOM05D000353 ORTHO05D013242 1.0e-25 119.8 77 79.2
BcaB05g23573 Brassica carinata HOM05D000589 ORTHO05D013242 1.7e-25 119.0 75 82.7
BcaB02g11474 Brassica carinata HOM05D000589 ORTHO05D013242 1.5e-24 115.9 75 82.7
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 7.3e-24 113.6 70 87.1
BcaB08g35927 Brassica carinata HOM05D025466 ORTHO05D013242 8.3e-20 100.1 60 86.7
BcaB01g02433 Brassica carinata HOM05D005426 ORTHO05D012988 1.1e-14 83.2 57 75.4
BcaB06g26826 Brassica carinata HOM05D000589 ORTHO05D013242 2.6e-13 78.6 46 87.0
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 2.6e-13 78.6 81 56.8
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 2.6e-13 78.6 81 56.8
BcaB06g26120 Brassica carinata HOM05D000353 ORTHO05D013242 3.8e-12 74.7 51 78.4
BcaB06g26774 Brassica carinata HOM05D000353 ORTHO05D092330 3.8e-12 74.7 46 87.0
A07p09370 Brassica napus HOM05D025466 ORTHO05D013242 8.4e-12 73.6 74 58.1
BraA07t28733Z Brassica rapa HOM05D025466 ORTHO05D013242 8.4e-12 73.6 74 58.1
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 1.4e-11 72.8 73 50.7
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 4.1e-11 71.2 73 49.3
BcaB01g00737 Brassica carinata HOM05D009963 ORTHO05D013780 1.9e-08 62.4 34 88.2
BcaB04g18092 Brassica carinata HOM05D000353 ORTHO05D013242 4.3e-08 61.2 70 50.0
BolC7t41941H Brassica oleracea HOM05D025466 ORTHO05D013242 1.6e-07 59.3 64 53.1
C07p14430 Brassica napus HOM05D025466 ORTHO05D013242 2.8e-07 58.5 64 53.1
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 1.4e-06 56.2 69 44.9
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 1.8e-06 55.8 69 44.9
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-06 55.5 69 44.9
C03p63090 Brassica napus HOM05D000353 ORTHO05D011975 2.4e-06 55.5 69 44.9
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 2.4e-06 55.5 69 44.9
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 2.4e-06 55.5 69 44.9
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 2.4e-06 55.5 69 44.9
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 2.4e-06 55.5 76 40.8
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 2.4e-06 55.5 69 44.9
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-06 55.1 69 44.9
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 4.0e-06 54.7 69 44.9
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 4.0e-06 54.7 69 46.4
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 4.0e-06 54.7 69 43.5
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 4.0e-06 54.7 69 46.4
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 4.0e-06 54.7 69 44.9
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 5.2e-06 54.3 69 43.5
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 6.9e-06 53.9 69 43.5
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 6.9e-06 53.9 69 43.5
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 6.9e-06 53.9 69 43.5
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 6.9e-06 53.9 69 43.5
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 6.9e-06 53.9 69 43.5
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 6.9e-06 53.9 69 43.5
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 6.9e-06 53.9 69 43.5
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 6.9e-06 53.9 69 43.5
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 6.9e-06 53.9 69 43.5
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 9.0e-06 53.5 69 43.5


User provided reference genes

Program Settings