Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 3.1e-63 245.4 163 100.0
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 1.2e-54 216.9 133 88.7
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 1.3e-53 213.4 127 89.0
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 3.8e-53 211.8 128 87.5
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 2.5e-52 209.1 133 85.7
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 5.7e-49 198.0 132 82.6
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 2.6e-46 189.1 111 91.0
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 5.7e-41 171.4 127 78.7
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 1.4e-34 150.2 84 95.2
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.8e-34 149.8 125 67.2
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 3.0e-34 149.1 111 73.0
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 3.0e-34 149.1 119 71.4
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 5.2e-34 148.3 125 67.2
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 6.8e-34 147.9 119 70.6
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 8.8e-34 147.5 93 87.1
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.5e-33 146.7 125 66.4
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 3.4e-33 145.6 119 68.9
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 3.4e-33 145.6 118 70.3
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 4.4e-33 145.2 83 94.0
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 4.4e-33 145.2 125 65.6
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 7.5e-33 144.4 113 72.6
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 9.8e-33 144.1 125 67.2
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-32 143.7 119 68.1
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 1.3e-32 143.7 121 68.6
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 2.8e-32 142.5 127 64.6
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 2.8e-32 142.5 112 72.3
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 3.7e-32 142.1 109 71.6
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 3.7e-32 142.1 111 69.4
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 4.8e-32 141.7 127 64.6
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 8.3e-32 141.0 125 65.6
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-31 140.6 113 70.8
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 1.1e-31 140.6 114 69.3
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.8e-31 139.8 115 68.7
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 3.1e-31 139.0 119 66.4
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 3.1e-31 139.0 113 69.9
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 3.1e-31 139.0 122 66.4
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 3.1e-31 139.0 127 63.8
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 4.1e-31 138.7 119 67.2
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 9.1e-31 137.5 98 80.6
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 9.1e-31 137.5 127 63.0
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-30 136.3 120 65.0
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 2.7e-30 136.0 115 68.7
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 3.5e-30 135.6 83 86.7
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 3.5e-30 135.6 113 66.4
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 4.5e-30 135.2 114 67.5
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 5.9e-30 134.8 99 74.7
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 5.9e-30 134.8 127 61.4
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 7.7e-30 134.4 118 66.9
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 1.3e-29 133.7 115 67.8
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 2.9e-29 132.5 115 67.8
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 3.8e-29 132.1 119 64.7
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 5.0e-29 131.7 112 68.8
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-28 129.8 113 68.1
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 3.3e-28 129.0 68 98.5
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 3.3e-28 129.0 124 60.5
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 7.2e-28 127.9 114 65.8
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 7.2e-28 127.9 114 65.8
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 2.8e-27 125.9 73 91.8
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 2.8e-27 125.9 118 64.4
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 4.7e-27 125.2 115 65.2
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 1.4e-26 123.6 119 61.3
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 5.2e-26 121.7 138 56.5
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 8.9e-26 120.9 91 74.7
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 1.5e-25 120.2 127 58.3
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 4.4e-25 118.6 93 73.1
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 2.8e-24 115.9 92 77.2
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 3.7e-24 115.5 111 61.3
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 2.4e-23 112.8 125 55.2
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 2.4e-23 112.8 116 59.5
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 4.1e-23 112.1 84 75.0
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 5.4e-23 111.7 98 69.4
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 5.4e-23 111.7 97 68.0
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 9.2e-23 110.9 84 77.4
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 5.9e-22 108.2 110 58.2
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 5.0e-21 105.1 126 53.2
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 6.6e-21 104.8 122 58.2
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 2.5e-20 102.8 103 61.2
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 3.3e-20 102.4 70 77.1
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 7.3e-20 101.3 78 69.2
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 9.5e-20 100.9 94 63.8
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 1.2e-19 100.5 102 64.7
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 6.1e-19 98.2 116 52.6
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 2.6e-17 92.8 75 73.3
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 2.9e-16 89.4 66 77.3
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 2.9e-16 89.4 126 48.4
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 1.9e-15 86.7 103 54.4
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 3.2e-15 85.9 83 59.0
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 3.2e-15 85.9 89 52.8
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 3.2e-15 85.9 89 53.9
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 4.1e-15 85.5 87 62.1
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 7.0e-15 84.7 89 51.7
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 7.0e-15 84.7 89 53.9
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 2.7e-14 82.8 101 56.4
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 2.7e-14 82.8 90 53.3
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 3.5e-14 82.4 89 51.7
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 4.6e-14 82.0 84 61.9
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 6.0e-14 81.6 102 54.9
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 6.0e-14 81.6 85 60.0
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 7.8e-14 81.3 72 56.9
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 7.8e-14 81.3 90 52.2
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 2.3e-13 79.7 104 53.8
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 3.0e-13 79.3 109 45.9
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 8.6e-13 77.8 80 55.0
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 1.9e-12 76.6 104 45.2
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 7.3e-12 74.7 73 52.1
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 1.2e-11 73.9 109 49.5
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 2.1e-11 73.2 73 50.7
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 1.1e-10 70.9 80 51.2
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 1.4e-10 70.5 87 54.0
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 1.8e-10 70.1 104 43.3
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 5.2e-10 68.6 92 47.8
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 2.6e-09 66.2 89 47.2
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 3.4e-09 65.9 88 43.2
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 7.5e-09 64.7 83 50.6
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 9.8e-09 64.3 78 46.2
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 9.8e-09 64.3 83 50.6
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 1.3e-08 63.9 97 45.4
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 1.3e-08 63.9 69 62.3
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 1.1e-07 60.8 77 51.9
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 7.1e-07 58.2 60 53.3
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 9.2e-07 57.8 40 77.5
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 3.5e-06 55.8 58 55.2
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 6.0e-06 55.1 82 43.9
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 7.8e-06 54.7 52 57.7


User provided reference genes

Program Settings