Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 7.7e-58 226.9 109 100.0
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 2.8e-52 208.4 108 92.6
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 2.8e-52 208.4 108 92.6
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 8.2e-52 206.8 108 91.7
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.4e-51 206.1 108 91.7
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 3.4e-50 201.4 108 88.9
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 2.9e-49 198.4 108 88.9
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 3.2e-48 194.9 108 86.1
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 4.7e-47 191.0 108 85.2
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 2.3e-46 188.7 108 82.4
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 4.4e-45 184.5 108 82.4
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 7.4e-45 183.7 108 81.5
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 1.0e-41 173.3 108 75.0
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 2.2e-41 172.2 108 72.2
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 3.8e-41 171.4 108 77.8
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 6.5e-41 170.6 108 76.9
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.1e-40 169.9 109 74.3
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 1.5e-40 169.5 108 74.1
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 1.5e-40 169.5 108 75.9
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.9e-40 169.1 108 73.1
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 3.2e-40 168.3 108 75.9
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 3.2e-40 168.3 108 75.9
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 4.2e-40 167.9 108 72.2
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 5.5e-40 167.5 108 74.1
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 5.5e-40 167.5 108 74.1
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 5.5e-40 167.5 108 73.1
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 7.2e-40 167.2 108 72.2
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 7.2e-40 167.2 108 73.1
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 9.4e-40 166.8 103 83.5
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 9.4e-40 166.8 108 73.1
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 9.4e-40 166.8 108 74.1
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 1.2e-39 166.4 108 71.3
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.2e-39 166.4 108 71.3
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 2.1e-39 165.6 108 71.3
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 2.1e-39 165.6 108 73.1
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 2.7e-39 165.2 108 74.1
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 2.7e-39 165.2 108 71.3
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 3.6e-39 164.9 108 72.2
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 3.6e-39 164.9 108 72.2
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 3.6e-39 164.9 108 71.3
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 3.6e-39 164.9 108 71.3
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 4.7e-39 164.5 108 70.4
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 6.1e-39 164.1 108 70.4
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 6.1e-39 164.1 108 71.3
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 6.1e-39 164.1 108 70.4
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 1.0e-38 163.3 109 71.6
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.0e-38 163.3 108 72.2
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.0e-38 163.3 108 70.4
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.0e-38 163.3 108 70.4
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 1.0e-38 163.3 108 70.4
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.4e-38 162.9 108 70.4
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.4e-38 162.9 108 73.1
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 1.8e-38 162.5 108 71.3
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 4.0e-38 161.4 107 71.0
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 4.0e-38 161.4 108 70.4
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 6.7e-38 160.6 108 68.5
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 6.7e-38 160.6 108 68.5
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 6.7e-38 160.6 108 68.5
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 8.8e-38 160.2 108 70.4
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 1.2e-37 159.8 108 69.4
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.5e-37 159.5 108 72.2
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.5e-37 159.5 108 71.3
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 2.0e-37 159.1 108 65.7
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 2.6e-37 158.7 108 69.4
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.6e-37 158.7 108 69.4
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.6e-37 158.7 108 69.4
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 7.5e-37 157.1 108 67.6
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 7.5e-37 157.1 108 67.6
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 9.7e-37 156.8 108 66.7
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.7e-36 156.0 108 66.7
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 1.7e-36 156.0 108 66.7
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.2e-36 155.6 108 67.6
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 3.7e-36 154.8 108 67.6
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 3.7e-36 154.8 108 66.7
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 3.7e-36 154.8 116 66.4
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 4.8e-36 154.5 108 66.7
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.4e-35 152.1 93 75.3
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 2.4e-35 152.1 108 65.7
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.4e-35 152.1 116 63.8
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 3.1e-35 151.8 108 65.7
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 7.7e-34 147.1 108 63.9
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.0e-33 146.7 107 64.5
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 2.2e-33 145.6 95 68.4
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 2.9e-33 145.2 95 73.7
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 6.5e-33 144.1 108 62.0
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.5e-32 142.9 108 62.0
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 7.2e-32 140.6 108 62.0
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.6e-31 139.4 134 53.7
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 3.6e-31 138.3 108 60.2
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.4e-30 136.3 108 61.1
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 8.8e-30 133.7 108 59.3
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 1.4e-27 126.3 109 57.8
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 2.4e-27 125.6 110 55.5
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 5.9e-26 120.9 110 54.5
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.5e-24 116.3 94 60.6
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.8e-22 107.5 110 54.5
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 9.2e-19 97.1 74 68.9
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 1.6e-18 96.3 107 47.7
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 5.6e-16 87.8 83 53.0
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 9.2e-11 70.5 58 58.6
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 5.0e-09 64.7 44 68.2
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 6.2e-07 57.8 42 61.9


User provided reference genes

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