Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23072 Brassica carinata HOM05D000170 ORTHO05D031320 5.1e-35 150.6 79 100.0
BcaB02g07110 Brassica carinata HOM05D000170 ORTHO05D000159 2.7e-28 128.3 73 90.4
BcaC08g45473 Brassica carinata HOM05D000170 ORTHO05D000159 1.9e-26 122.1 74 87.8
BolC6t38261H Brassica oleracea HOM05D000170 ORTHO05D000159 1.9e-26 122.1 74 87.8
A07p27950 Brassica napus HOM05D000170 ORTHO05D000159 8.1e-25 116.7 75 84.0
C06p31200 Brassica napus HOM05D000170 ORTHO05D000159 3.1e-24 114.8 75 82.7
BolC6t40180H Brassica oleracea HOM05D000170 ORTHO05D000159 9.0e-24 113.2 75 80.0
A07p42980 Brassica napus HOM05D000170 ORTHO05D000159 1.2e-23 112.8 75 80.0
C06p51620 Brassica napus HOM05D000170 ORTHO05D000159 4.4e-23 110.9 75 78.7
Sp5g32710 Schrenkiella parvula HOM05D000170 ORTHO05D000159 4.9e-22 107.5 75 76.0
BraA07t31819Z Brassica rapa HOM05D000170 ORTHO05D000159 3.5e-20 101.3 90 65.6
BcaB03g15944 Brassica carinata HOM05D000170 ORTHO05D000159 7.8e-20 100.1 75 70.7
AT1G77530 Arabidopsis thaliana HOM05D000170 ORTHO05D000159 2.1e-17 92.0 76 64.5
CARHR048350 Cardamine hirsuta HOM05D000170 ORTHO05D000159 2.8e-17 91.7 73 64.4
CARHR048360 Cardamine hirsuta HOM05D000170 ORTHO05D000159 3.6e-17 91.3 73 64.4
Aa31LG2G620 Aethionema arabicum HOM05D000170 ORTHO05D000159 2.4e-16 88.6 73 64.4
Carub.0007s0887 Capsella rubella HOM05D000170 ORTHO05D000159 4.0e-16 87.8 73 64.4
Carub.0002s2442 Capsella rubella HOM05D000170 ORTHO05D000159 9.0e-16 86.7 74 63.5
Sp2g06080 Schrenkiella parvula HOM05D000170 ORTHO05D000159 1.5e-15 85.9 74 60.8
AL2G37740 Arabidopsis lyrata HOM05D000170 ORTHO05D000159 2.6e-15 85.1 76 63.2
BcaB05g25056 Brassica carinata HOM05D000170 ORTHO05D000159 4.5e-15 84.3 76 59.2
CARHR071060 Cardamine hirsuta HOM05D000170 ORTHO05D000159 4.5e-15 84.3 76 63.2
CARHR048370 Cardamine hirsuta HOM05D000170 ORTHO05D000159 5.8e-15 84.0 73 61.6
BcaB05g25061 Brassica carinata HOM05D000170 ORTHO05D000159 7.6e-15 83.6 76 59.2
Sp5g32700 Schrenkiella parvula HOM05D000170 ORTHO05D000159 7.6e-15 83.6 76 61.8
BcaC04g22475 Brassica carinata HOM05D000170 ORTHO05D000159 1.3e-14 82.8 73 61.6
C09p18870 Brassica napus HOM05D000170 ORTHO05D000159 1.3e-14 82.8 73 61.6
BolC9t54789H Brassica oleracea HOM05D000170 ORTHO05D000159 1.3e-14 82.8 73 61.6
A07p06110 Brassica napus HOM05D000170 ORTHO05D000159 1.7e-14 82.4 73 61.6
BraA01t02629Z Brassica rapa HOM05D000170 ORTHO05D000159 1.7e-14 82.4 73 61.6
BraA07t28409Z Brassica rapa HOM05D000170 ORTHO05D000159 1.7e-14 82.4 73 61.6
Thhalv10018703m.g Eutrema salsugineum HOM05D000170 ORTHO05D000159 1.7e-14 82.4 77 59.7
AL2G12360 Arabidopsis lyrata HOM05D000170 ORTHO05D000159 2.2e-14 82.0 73 57.5
CARHR230420 Cardamine hirsuta HOM05D000170 ORTHO05D000159 2.2e-14 82.0 73 64.4
BcaC08g45474 Brassica carinata HOM05D000170 ORTHO05D000159 2.9e-14 81.6 76 60.5
BolC6t38262H Brassica oleracea HOM05D000170 ORTHO05D000159 2.9e-14 81.6 76 60.5
Sp2g01440 Schrenkiella parvula HOM05D000170 ORTHO05D000159 2.9e-14 81.6 73 60.3
AT1G77520 Arabidopsis thaliana HOM05D000170 ORTHO05D000159 3.8e-14 81.3 76 59.2
BcaC04g21224 Brassica carinata HOM05D000170 ORTHO05D000159 3.8e-14 81.3 73 60.3
C09p34150 Brassica napus HOM05D000170 ORTHO05D000159 3.8e-14 81.3 73 60.3
BolC9t56261H Brassica oleracea HOM05D000170 ORTHO05D000159 3.8e-14 81.3 73 60.3
Carub.0005s0434 Capsella rubella HOM05D000170 ORTHO05D000159 3.8e-14 81.3 73 60.3
A07p27970 Brassica napus HOM05D000170 ORTHO05D000159 4.9e-14 80.9 73 61.6
BcaC03g15743 Brassica carinata HOM05D000170 ORTHO05D000159 6.4e-14 80.5 76 59.2
A09p15650 Brassica napus HOM05D000170 ORTHO05D000159 6.4e-14 80.5 73 60.3
C02p34670 Brassica napus HOM05D000170 ORTHO05D000159 6.4e-14 80.5 76 59.2
BolC2t09489H Brassica oleracea HOM05D000170 ORTHO05D000159 6.4e-14 80.5 76 59.2
BraA09t37206Z Brassica rapa HOM05D000170 ORTHO05D000159 6.4e-14 80.5 73 60.3
A02p21380 Brassica napus HOM05D000170 ORTHO05D000159 8.4e-14 80.1 76 59.2
Carub.0002s0181 Capsella rubella HOM05D000170 ORTHO05D000159 8.4e-14 80.1 73 60.3
CARHR266950 Cardamine hirsuta HOM05D000170 ORTHO05D000159 1.1e-13 79.7 73 57.5
AL2G12370 Arabidopsis lyrata HOM05D000170 ORTHO05D000159 1.9e-13 79.0 73 54.8
C06p31220 Brassica napus HOM05D000170 ORTHO05D000159 1.9e-13 79.0 76 59.2
BcaB03g12712 Brassica carinata HOM05D000170 ORTHO05D000159 2.4e-13 78.6 73 58.9
A06p47350 Brassica napus HOM05D000170 ORTHO05D000159 2.4e-13 78.6 73 58.9
BraA06t27605Z Brassica rapa HOM05D000170 ORTHO05D000159 2.4e-13 78.6 73 58.9
CARHR071040 Cardamine hirsuta HOM05D000170 ORTHO05D000159 3.2e-13 78.2 76 57.9
AT1G63140 Arabidopsis thaliana HOM05D000170 ORTHO05D000159 4.2e-13 77.8 73 56.2
BraA07t30442Z Brassica rapa HOM05D000170 ORTHO05D000159 4.2e-13 77.8 73 60.3
BcaC08g47603 Brassica carinata HOM05D000170 ORTHO05D000159 5.4e-13 77.4 47 80.9
Carub.0002s0178 Capsella rubella HOM05D000170 ORTHO05D000159 5.4e-13 77.4 74 58.1
C07p26980 Brassica napus HOM05D000170 ORTHO05D000159 7.1e-13 77.0 76 56.6
BcaC06g31637 Brassica carinata HOM05D000170 ORTHO05D000159 9.3e-13 76.6 76 59.2
BcaC06g34573 Brassica carinata HOM05D000170 ORTHO05D000159 9.3e-13 76.6 76 56.6
BolC7t43228H Brassica oleracea HOM05D000170 ORTHO05D000159 9.3e-13 76.6 76 56.6
BraA08t33813Z Brassica rapa HOM05D000170 ORTHO05D000159 1.2e-12 76.3 73 58.9
Aa31LG4G7590 Aethionema arabicum HOM05D000170 ORTHO05D000159 1.6e-12 75.9 73 57.5
Aa31LG4G7580 Aethionema arabicum HOM05D000170 ORTHO05D000159 2.7e-12 75.1 73 57.5
AL1G57870 Arabidopsis lyrata HOM05D000170 ORTHO05D031320 6.0e-12 73.9 68 63.2
BcaB07g31386 Brassica carinata HOM05D000170 ORTHO05D000159 6.0e-12 73.9 74 59.5
BcaC06g34578 Brassica carinata HOM05D000170 ORTHO05D000159 6.0e-12 73.9 76 55.3
A08p18510 Brassica napus HOM05D000170 ORTHO05D000159 6.0e-12 73.9 73 58.9
C07p26930 Brassica napus HOM05D000170 ORTHO05D000159 6.0e-12 73.9 76 55.3
BolC7t43221H Brassica oleracea HOM05D000170 ORTHO05D000159 6.0e-12 73.9 76 55.3
C03p87690 Brassica napus HOM05D000170 ORTHO05D000159 1.3e-11 72.8 73 54.8
BolC3t21085H Brassica oleracea HOM05D000170 ORTHO05D000159 1.3e-11 72.8 73 54.8
BraA02t07154Z Brassica rapa HOM05D000170 ORTHO05D000159 1.8e-11 72.4 76 52.6
BcaC06g31938 Brassica carinata HOM05D000170 ORTHO05D000159 3.0e-11 71.6 73 52.1
A02p21420 Brassica napus HOM05D000170 ORTHO05D000159 3.9e-11 71.2 76 51.3
C02p34800 Brassica napus HOM05D000170 ORTHO05D000159 3.9e-11 71.2 76 51.3
Carub.0002s2443 Capsella rubella HOM05D000170 ORTHO05D000159 3.9e-11 71.2 76 55.3
Aa31LG4G7600 Aethionema arabicum HOM05D000170 ORTHO05D000159 6.7e-11 70.5 74 55.4
BcaC03g15747 Brassica carinata HOM05D000170 ORTHO05D000159 6.7e-11 70.5 73 53.4
BolC2t09499H Brassica oleracea HOM05D000170 ORTHO05D000159 6.7e-11 70.5 73 53.4
CARHR071050 Cardamine hirsuta HOM05D000170 ORTHO05D000159 1.5e-10 69.3 76 51.3
Thhalv10014001m.g Eutrema salsugineum HOM05D000170 ORTHO05D000159 2.5e-10 68.6 76 50.0
A07p27960 Brassica napus HOM05D000170 ORTHO05D000159 3.3e-10 68.2 39 84.6
Aa31LG4G7550 Aethionema arabicum HOM05D000170 ORTHO05D000159 4.3e-10 67.8 74 52.7
BcaB01g02736 Brassica carinata HOM05D000170 ORTHO05D000159 9.6e-10 66.6 73 53.4
BraA01t02623Z Brassica rapa HOM05D000170 ORTHO05D000159 9.6e-10 66.6 73 49.3
BolC4t24467H Brassica oleracea HOM05D000170 ORTHO05D000159 1.6e-09 65.9 73 53.4
BcaC09g51954 Brassica carinata HOM05D000170 ORTHO05D000159 2.1e-09 65.5 75 53.3
BcaC09g51958 Brassica carinata HOM05D000170 ORTHO05D000159 2.1e-09 65.5 75 53.3
BcaC09g51960 Brassica carinata HOM05D000170 ORTHO05D000159 2.1e-09 65.5 75 53.3
C01p07230 Brassica napus HOM05D000170 ORTHO05D000159 2.1e-09 65.5 75 53.3
BolC1t00714H Brassica oleracea HOM05D000170 ORTHO05D000159 2.1e-09 65.5 75 53.3
Thhalv10025490m.g Eutrema salsugineum HOM05D000170 ORTHO05D000159 3.7e-09 64.7 74 58.1
BraA01t00616Z Brassica rapa HOM05D000170 ORTHO05D000159 4.8e-09 64.3 52 63.5
BcaB08g35955 Brassica carinata HOM05D000170 ORTHO05D000159 8.1e-09 63.5 75 49.3
Aa31LG4G7620 Aethionema arabicum HOM05D000170 ORTHO05D000159 1.8e-08 62.4 55 56.4
Carub.0008s1410 Capsella rubella HOM05D000170 ORTHO05D000159 1.8e-08 62.4 73 47.9
THA.LOC104813661 Tarenaya hassleriana HOM05D000170 ORTHO05D000159 3.1e-08 61.6 64 53.1
BcaC08g46256 Brassica carinata HOM05D000170 ORTHO05D000159 4.0e-08 61.2 73 49.3
BcaB03g15107 Brassica carinata HOM05D000170 ORTHO05D000159 5.3e-08 60.8 73 49.3
C02p34720 Brassica napus HOM05D000170 ORTHO05D031320 5.3e-08 60.8 55 60.0
C06p41740 Brassica napus HOM05D000170 ORTHO05D000159 5.3e-08 60.8 73 49.3
Thhalv10023537m.g Eutrema salsugineum HOM05D000170 ORTHO05D000159 5.3e-08 60.8 73 52.1
AT5G53810 Arabidopsis thaliana HOM05D000170 ORTHO05D000159 1.2e-07 59.7 74 51.4
BolC6t39253H Brassica oleracea HOM05D000170 ORTHO05D000159 1.2e-07 59.7 73 49.3
CARHR051620 Cardamine hirsuta HOM05D000170 ORTHO05D000159 7.6e-07 57.0 33 78.8
AL8G28860 Arabidopsis lyrata HOM05D000170 ORTHO05D000159 9.9e-07 56.6 73 42.5
THA.LOC104813663 Tarenaya hassleriana HOM05D000170 ORTHO05D000159 4.9e-06 54.3 67 41.8
Thhalv10015575m.g Eutrema salsugineum HOM05D000170 ORTHO05D000159 8.4e-06 53.5 60 51.7
THA.LOC104814017 Tarenaya hassleriana HOM05D000170 ORTHO05D000159 8.4e-06 53.5 47 55.3


User provided reference genes

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