Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 4.1e-188 661.8 479 100.0
BcaB02g11375 Brassica carinata HOM05D007203 ORTHO05D011558 6.2e-51 206.1 154 73.4
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 1.7e-40 171.4 428 39.5
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 2.5e-28 131.0 194 49.5
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 4.4e-25 120.2 462 29.7
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.0e-21 109.0 477 28.7
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 6.6e-21 106.3 508 41.3
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 1.9e-20 104.8 398 31.9
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 7.3e-20 102.8 420 41.0
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.4e-15 88.6 430 30.7
BcaB01g01435 Brassica carinata HOM05D007203 ORTHO05D011558 1.9e-15 88.2 409 34.7
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 1.6e-14 85.1 300 35.7
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 6.0e-14 83.2 66 77.3
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 8.7e-13 79.3 456 31.4
C04p37490 Brassica napus HOM05D037508 ORTHO05D031939 1.3e-11 75.5 81 70.4
BcaC02g09707 Brassica carinata HOM05D037508 ORTHO05D031939 8.1e-11 72.8 83 68.7
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-10 72.0 501 29.5
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 2.4e-10 71.2 201 34.3
BcaB01g01207 Brassica carinata HOM05D004128 ORTHO05D017536 6.9e-10 69.7 102 43.1
BolC4t25316H Brassica oleracea HOM05D037508 ORTHO05D031939 6.9e-10 69.7 136 47.1
BcaB06g26429 Brassica carinata HOM05D007203 ORTHO05D011558 9.0e-10 69.3 116 45.7
C04p26210 Brassica napus HOM05D004128 ORTHO05D017536 1.5e-09 68.6 143 37.1
BolC4t24185H Brassica oleracea HOM05D004128 ORTHO05D017536 1.5e-09 68.6 143 37.1
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 2.0e-09 68.2 109 38.5
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 2.6e-09 67.8 82 43.9
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-09 67.0 114 37.7
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 4.5e-09 67.0 113 36.3
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 5.8e-09 66.6 109 37.6
BcaB03g16102 Brassica carinata HOM05D007203 ORTHO05D011558 7.6e-09 66.2 110 43.6
BcaC06g35975 Brassica carinata HOM05D004128 ORTHO05D008395 7.6e-09 66.2 409 33.5
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 7.6e-09 66.2 109 37.6
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 7.6e-09 66.2 117 35.9
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 9.9e-09 65.9 114 44.7
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 9.9e-09 65.9 61 54.1
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 9.9e-09 65.9 89 41.6
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 9.9e-09 65.9 111 36.9
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 1.3e-08 65.5 64 51.6
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 1.3e-08 65.5 133 36.1
BcaC02g10649 Brassica carinata HOM05D004128 ORTHO05D017536 1.7e-08 65.1 248 34.3
BcaC09g49573 Brassica carinata HOM05D007203 ORTHO05D011558 1.7e-08 65.1 144 37.5
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 1.7e-08 65.1 135 36.3
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.7e-08 65.1 590 35.6
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 2.2e-08 64.7 120 35.0
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-08 64.7 130 33.8
BolC2t08771H Brassica oleracea HOM05D004128 ORTHO05D017536 2.2e-08 64.7 138 38.4
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 2.9e-08 64.3 135 36.3
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 2.9e-08 64.3 64 51.6
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 3.8e-08 63.9 84 42.9
C03p33440 Brassica napus HOM05D007203 ORTHO05D027708 3.8e-08 63.9 124 37.9
BolC2t09431H Brassica oleracea HOM05D007203 ORTHO05D027708 3.8e-08 63.9 133 35.3
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 3.8e-08 63.9 124 37.9
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 3.8e-08 63.9 112 36.6
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 3.8e-08 63.9 124 37.9
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 4.9e-08 63.5 86 44.2
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 4.9e-08 63.5 86 44.2
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 4.9e-08 63.5 122 39.3
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 4.9e-08 63.5 90 40.0
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 6.4e-08 63.2 61 52.5
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 6.4e-08 63.2 153 36.6
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 6.4e-08 63.2 122 36.9
BolC3t17977H Brassica oleracea HOM05D007203 ORTHO05D011558 6.4e-08 63.2 122 36.9
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 6.4e-08 63.2 62 51.6
BcaC04g20966 Brassica carinata HOM05D006121 ORTHO05D009559 8.4e-08 62.8 44 70.5
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 1.1e-07 62.4 220 50.0
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 1.1e-07 62.4 113 35.4
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 1.4e-07 62.0 406 28.3
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-07 62.0 114 35.1
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-07 62.0 114 35.1
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 1.9e-07 61.6 136 37.5
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 1.9e-07 61.6 499 41.5
C01p16070 Brassica napus HOM05D007203 ORTHO05D011558 1.9e-07 61.6 122 36.1
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 1.9e-07 61.6 91 40.7
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 2.4e-07 61.2 84 44.0
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 5.5e-07 60.1 120 33.3
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 5.5e-07 60.1 329 31.6
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 5.5e-07 60.1 120 33.3
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 5.5e-07 60.1 268 26.9
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 7.1e-07 59.7 592 35.5
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-06 58.9 111 34.2
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-06 58.9 89 40.4
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 1.2e-06 58.9 43 69.8
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 2.1e-06 58.2 83 38.6
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 2.7e-06 57.8 112 36.6
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 4.6e-06 57.0 185 40.5
A03p58160 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-06 57.0 287 27.9
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 7.9e-06 56.2 61 49.2


User provided reference genes

Program Settings