Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23053 Brassica carinata HOM05D010754 ORTHO05D011439 3.9e-41 171.0 86 100.0
Sp7g02110 Schrenkiella parvula HOM05D010754 ORTHO05D011439 9.7e-24 113.2 86 70.9
C04p46500 Brassica napus HOM05D010754 ORTHO05D011439 6.3e-23 110.5 86 70.9
BraA04t16940Z Brassica rapa HOM05D010754 ORTHO05D011439 1.8e-17 92.4 86 60.5
BcaB06g27407 Brassica carinata HOM05D010754 ORTHO05D011439 2.3e-17 92.0 86 65.1
Carub.0002s1398 Capsella rubella HOM05D010754 ORTHO05D011439 8.8e-17 90.1 91 53.8
CARHR262190 Cardamine hirsuta HOM05D010754 ORTHO05D011439 2.0e-16 89.0 92 56.5
A04p12780 Brassica napus HOM05D010754 ORTHO05D011439 5.7e-16 87.4 82 59.8
BcaC08g44438 Brassica carinata HOM05D010754 ORTHO05D011439 3.7e-15 84.7 83 55.4
C06p18810 Brassica napus HOM05D010754 ORTHO05D011439 3.7e-15 84.7 83 55.4
BolC6t37086H Brassica oleracea HOM05D010754 ORTHO05D011439 3.7e-15 84.7 83 55.4
BraA07t29714Z Brassica rapa HOM05D010754 ORTHO05D011439 8.3e-15 83.6 83 54.2
A07p20150 Brassica napus HOM05D010754 ORTHO05D011439 1.1e-14 83.2 83 54.2
AL7G50160 Arabidopsis lyrata HOM05D010754 ORTHO05D011439 3.5e-13 78.2 77 55.8
BcaB02g07960 Brassica carinata HOM05D010754 ORTHO05D011439 1.0e-12 76.6 76 55.3
Carub.0007s3574 Capsella rubella HOM05D010754 ORTHO05D011439 2.8e-10 68.6 81 48.1
CARHR262200 Cardamine hirsuta HOM05D010754 ORTHO05D011439 3.6e-10 68.2 78 50.0
BcaC06g31169 Brassica carinata HOM05D016433 ORTHO05D011439 2.3e-09 65.5 77 48.1
BcaC06g31158 Brassica carinata HOM05D016433 ORTHO05D011439 5.7e-08 60.8 77 48.1
BolC4t26236H Brassica oleracea HOM05D010754 ORTHO05D011439 2.2e-07 58.9 44 70.5
CAN.G1021.17 Capsicum annuum HOM05D041871 ORTHO05D033998 3.7e-07 58.2 79 45.6
C07p34080 Brassica napus HOM05D016433 ORTHO05D011439 4.9e-07 57.8 76 47.4
BolC7t43922H Brassica oleracea HOM05D016433 ORTHO05D011439 4.9e-07 57.8 76 47.4
A06p42940 Brassica napus HOM05D016433 ORTHO05D011439 1.4e-06 56.2 76 46.1
Sp2g14540 Schrenkiella parvula HOM05D016433 ORTHO05D011439 2.4e-06 55.5 71 43.7


User provided reference genes

Program Settings