Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23043 Brassica carinata HOM05D000792 ORTHO05D001021 6.7e-47 190.3 92 100.0
BcaB05g23041 Brassica carinata HOM05D000792 ORTHO05D001021 4.1e-44 181.0 92 94.6
BcaC06g35738 Brassica carinata HOM05D000792 ORTHO05D014974 2.9e-34 148.3 98 79.6
BcaB05g24361 Brassica carinata HOM05D000792 ORTHO05D001021 7.0e-20 100.5 93 61.3
BcaB02g07907 Brassica carinata HOM05D000792 ORTHO05D001021 1.2e-16 89.7 51 76.5
BcaC08g44509 Brassica carinata HOM05D000792 ORTHO05D001021 2.8e-16 88.6 50 78.0
A07p20690 Brassica napus HOM05D000792 ORTHO05D001021 2.8e-16 88.6 50 78.0
C06p19610 Brassica napus HOM05D000792 ORTHO05D001021 2.8e-16 88.6 50 78.0
BolC6t37154H Brassica oleracea HOM05D000792 ORTHO05D001021 2.8e-16 88.6 50 78.0
BraA07t29760Z Brassica rapa HOM05D000792 ORTHO05D001021 2.8e-16 88.6 50 78.0
BcaB02g07909 Brassica carinata HOM05D000792 ORTHO05D001021 4.7e-16 87.8 50 76.0
BolC7t41623H Brassica oleracea HOM05D000792 ORTHO05D014974 3.0e-15 85.1 82 59.8
BcaC07g37427 Brassica carinata HOM05D000792 ORTHO05D001021 2.0e-14 82.4 50 74.0
BolC8t47750H Brassica oleracea HOM05D000792 ORTHO05D001021 2.0e-14 82.4 50 74.0
A08p07340 Brassica napus HOM05D000792 ORTHO05D001021 2.6e-14 82.0 50 74.0
BraA08t32748Z Brassica rapa HOM05D000792 ORTHO05D001021 2.6e-14 82.0 50 74.0
C07p11470 Brassica napus HOM05D000792 ORTHO05D014974 3.4e-14 81.6 82 59.8
BcaC02g08983 Brassica carinata HOM05D000792 ORTHO05D001021 5.7e-14 80.9 54 70.4
C08p09040 Brassica napus HOM05D000792 ORTHO05D001021 5.7e-14 80.9 50 72.0
Thhalv10027670m.g Eutrema salsugineum HOM05D000792 ORTHO05D001021 9.8e-14 80.1 49 75.5
BcaB04g17738 Brassica carinata HOM05D000792 ORTHO05D001021 4.9e-13 77.8 50 70.0
Sp7g00770 Schrenkiella parvula HOM05D000792 ORTHO05D001021 4.9e-13 77.8 50 70.0
A03p68270 Brassica napus HOM05D000792 ORTHO05D014974 1.1e-12 76.6 82 54.9
Carub.0007s3434 Capsella rubella HOM05D000792 ORTHO05D001021 1.4e-12 76.3 50 66.0
AT5G41130 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 2.4e-12 75.5 50 70.0
BraA01t02641Z Brassica rapa HOM05D000792 ORTHO05D014974 2.4e-12 75.5 82 53.7
BraA04t17077Z Brassica rapa HOM05D000792 ORTHO05D001021 2.0e-11 72.4 50 68.0
C04p48200 Brassica napus HOM05D000792 ORTHO05D001021 2.7e-11 72.0 50 68.0
BolC4t26412H Brassica oleracea HOM05D000792 ORTHO05D001021 2.7e-11 72.0 50 68.0
A04p14170 Brassica napus HOM05D000792 ORTHO05D001021 4.5e-11 71.2 50 66.0
CARHR213240 Cardamine hirsuta HOM05D000792 ORTHO05D001021 5.9e-11 70.9 50 66.0
AL7G48380 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 7.8e-11 70.5 50 66.0
BcaB06g27600 Brassica carinata HOM05D000792 ORTHO05D001021 1.0e-10 70.1 50 66.0
Aa31LG9G710 Aethionema arabicum HOM05D000792 ORTHO05D001021 1.3e-10 69.7 50 58.0
AL7G48430 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 2.9e-10 68.6 47 68.1
AT5G41120 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 2.9e-10 68.6 47 68.1
Carub.0007s3437 Capsella rubella HOM05D000792 ORTHO05D001021 7.3e-09 63.9 47 66.0
BcaC06g31041 Brassica carinata HOM05D000792 ORTHO05D001021 6.1e-08 60.8 49 53.1
C02p53390 Brassica napus HOM05D000792 ORTHO05D001021 1.0e-07 60.1 49 51.0
CARHR213250 Cardamine hirsuta HOM05D000792 ORTHO05D001021 1.4e-07 59.7 50 56.0
AL5G15800 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 2.3e-07 58.9 50 52.0
A06p41720 Brassica napus HOM05D000792 ORTHO05D001021 2.3e-07 58.9 49 51.0
BraA06t27092Z Brassica rapa HOM05D000792 ORTHO05D001021 2.3e-07 58.9 49 51.0
Sp2g15980 Schrenkiella parvula HOM05D000792 ORTHO05D001021 3.0e-07 58.5 49 51.0
BolC7t44106H Brassica oleracea HOM05D000792 ORTHO05D001021 4.0e-07 58.2 49 49.0
Thhalv10003736m.g Eutrema salsugineum HOM05D000792 ORTHO05D001021 4.0e-07 58.2 49 51.0
BcaC03g17396 Brassica carinata HOM05D000792 ORTHO05D001021 5.2e-07 57.8 65 40.0
BcaC06g33886 Brassica carinata HOM05D000792 ORTHO05D001021 5.2e-07 57.8 49 49.0
C07p35900 Brassica napus HOM05D000792 ORTHO05D001021 5.2e-07 57.8 49 49.0
BcaB07g30206 Brassica carinata HOM05D000792 ORTHO05D001021 6.8e-07 57.4 49 51.0
A02p34820 Brassica napus HOM05D000792 ORTHO05D001021 8.9e-07 57.0 49 49.0
C02p53400 Brassica napus HOM05D000792 ORTHO05D001021 8.9e-07 57.0 59 42.4
BraA02t08489Z Brassica rapa HOM05D000792 ORTHO05D001021 8.9e-07 57.0 49 49.0
CARHR147910 Cardamine hirsuta HOM05D000792 ORTHO05D001021 8.9e-07 57.0 50 50.0
THA.LOC104805313 Tarenaya hassleriana HOM05D000792 ORTHO05D001021 1.2e-06 56.6 50 50.0
BcaC03g17394 Brassica carinata HOM05D000792 ORTHO05D001021 1.5e-06 56.2 49 49.0
BolC2t11415H Brassica oleracea HOM05D000792 ORTHO05D001021 1.5e-06 56.2 49 49.0
A02p34830 Brassica napus HOM05D000792 ORTHO05D001021 2.0e-06 55.8 49 46.9
BraA02t08490Z Brassica rapa HOM05D000792 ORTHO05D001021 2.0e-06 55.8 49 46.9
Carub.0005s0493 Capsella rubella HOM05D000792 ORTHO05D001021 5.7e-06 54.3 50 48.0
QL02p070287 Quercus lobata HOM05D000792 ORTHO05D001021 5.7e-06 54.3 49 51.0
AL5G15810 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 7.5e-06 53.9 50 48.0
Carub.0005s0495 Capsella rubella HOM05D000792 ORTHO05D001021 9.8e-06 53.5 47 48.9
QL02p070235 Quercus lobata HOM05D000792 ORTHO05D001021 9.8e-06 53.5 49 51.0


User provided reference genes

Program Settings