Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23042 Brassica carinata HOM05D001312 ORTHO05D001832 3.0e-51 204.9 104 100.0
BcaB05g23039 Brassica carinata HOM05D001312 ORTHO05D001832 4.9e-46 187.6 96 99.0
BcaC04g19184 Brassica carinata HOM05D001312 ORTHO05D001832 1.5e-31 139.4 103 71.8
C09p64490 Brassica napus HOM05D001312 ORTHO05D001832 1.5e-31 139.4 103 71.8
BolC9t59283H Brassica oleracea HOM05D001312 ORTHO05D001832 1.5e-31 139.4 103 71.8
BcaB08g37000 Brassica carinata HOM05D001312 ORTHO05D001832 5.8e-31 137.5 101 76.2
A10p25420 Brassica napus HOM05D001312 ORTHO05D001832 7.1e-29 130.6 103 69.9
BraA10t44606Z Brassica rapa HOM05D001312 ORTHO05D001832 1.6e-28 129.4 103 68.9
Thhalv10012427m.g Eutrema salsugineum HOM05D001312 ORTHO05D001832 5.3e-24 114.4 111 61.3
Aa31LG3G14830 Aethionema arabicum HOM05D001312 ORTHO05D001832 8.4e-22 107.1 112 59.8
Sp6g31240 Schrenkiella parvula HOM05D001312 ORTHO05D001832 2.1e-20 102.4 111 56.8
CARHR200700 Cardamine hirsuta HOM05D001312 ORTHO05D001832 2.7e-20 102.1 102 59.8
AT5G12400 Arabidopsis thaliana HOM05D001312 ORTHO05D001832 1.4e-16 89.7 103 53.4
AL6G23200 Arabidopsis lyrata HOM05D001312 ORTHO05D001832 3.1e-16 88.6 121 46.3
Carub.0006s1090 Capsella rubella HOM05D001312 ORTHO05D001832 2.6e-15 85.5 102 49.0
BraA02t05132Z Brassica rapa HOM05D001312 ORTHO05D001832 1.8e-11 72.8 103 46.6
A02p01520 Brassica napus HOM05D001312 ORTHO05D001832 5.1e-11 71.2 103 45.6
BolC3t13155H Brassica oleracea HOM05D001312 ORTHO05D001832 5.1e-11 71.2 54 72.2
BcaB01g05404 Brassica carinata HOM05D001312 ORTHO05D001832 4.3e-10 68.2 60 66.7
BraA03t09897Z Brassica rapa HOM05D001312 ORTHO05D001832 4.3e-10 68.2 54 68.5
A03p05600 Brassica napus HOM05D001312 ORTHO05D001832 5.7e-10 67.8 54 68.5
C03p06550 Brassica napus HOM05D001312 ORTHO05D001832 9.7e-10 67.0 53 69.8
Glyma.12G021900 Glycine max HOM05D001312 ORTHO05D001832 9.1e-08 60.5 75 42.7
BcaNung03620 Brassica carinata HOM05D001312 ORTHO05D001832 1.0e-06 57.0 81 49.4
Glyma.11G095800 Glycine max HOM05D001312 ORTHO05D001832 3.8e-06 55.1 105 37.1
Dinv22150 Davidia involucrata HOM05D001312 ORTHO05D001832 5.0e-06 54.7 110 36.4
Phvul.011G023900 Phaseolus vulgaris HOM05D001312 ORTHO05D001832 6.5e-06 54.3 79 36.7
Sabra16G0155000 Salix brachista HOM05D001312 ORTHO05D001832 6.5e-06 54.3 118 35.6
BcaNung01192 Brassica carinata HOM05D001312 ORTHO05D001832 8.5e-06 53.9 79 46.8
BcaNung03617 Brassica carinata HOM05D001312 ORTHO05D001832 8.5e-06 53.9 79 46.8
BolC2t06519H Brassica oleracea HOM05D001312 ORTHO05D001832 8.5e-06 53.9 79 46.8


User provided reference genes

Program Settings