Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23041 Brassica carinata HOM05D000792 ORTHO05D001021 1.1e-46 189.5 92 100.0
BcaB05g23043 Brassica carinata HOM05D000792 ORTHO05D001021 5.3e-44 180.6 92 94.6
BcaC06g35738 Brassica carinata HOM05D000792 ORTHO05D014974 4.7e-32 141.0 98 76.5
BcaB05g24361 Brassica carinata HOM05D000792 ORTHO05D001021 1.1e-17 93.2 93 58.1
BcaB02g07907 Brassica carinata HOM05D000792 ORTHO05D001021 2.1e-16 89.0 51 78.4
BcaC08g44509 Brassica carinata HOM05D000792 ORTHO05D001021 6.1e-16 87.4 50 78.0
A07p20690 Brassica napus HOM05D000792 ORTHO05D001021 6.1e-16 87.4 50 78.0
C06p19610 Brassica napus HOM05D000792 ORTHO05D001021 6.1e-16 87.4 50 78.0
BolC6t37154H Brassica oleracea HOM05D000792 ORTHO05D001021 6.1e-16 87.4 50 78.0
BraA07t29760Z Brassica rapa HOM05D000792 ORTHO05D001021 6.1e-16 87.4 50 78.0
BcaB02g07909 Brassica carinata HOM05D000792 ORTHO05D001021 1.0e-15 86.7 50 76.0
BolC7t41623H Brassica oleracea HOM05D000792 ORTHO05D014974 1.8e-15 85.9 82 59.8
C07p11470 Brassica napus HOM05D000792 ORTHO05D014974 1.5e-14 82.8 82 61.0
BcaC02g08983 Brassica carinata HOM05D000792 ORTHO05D001021 1.3e-13 79.7 54 68.5
BcaC07g37427 Brassica carinata HOM05D000792 ORTHO05D001021 1.3e-13 79.7 50 72.0
BolC8t47750H Brassica oleracea HOM05D000792 ORTHO05D001021 1.3e-13 79.7 50 72.0
A08p07340 Brassica napus HOM05D000792 ORTHO05D001021 1.7e-13 79.3 50 72.0
BraA08t32748Z Brassica rapa HOM05D000792 ORTHO05D001021 1.7e-13 79.3 50 72.0
Thhalv10027670m.g Eutrema salsugineum HOM05D000792 ORTHO05D001021 1.7e-13 79.3 49 75.5
A03p68270 Brassica napus HOM05D000792 ORTHO05D014974 3.7e-13 78.2 82 53.7
C08p09040 Brassica napus HOM05D000792 ORTHO05D001021 3.7e-13 78.2 50 70.0
AT5G41130 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 8.3e-13 77.0 50 72.0
BraA01t02641Z Brassica rapa HOM05D000792 ORTHO05D014974 8.3e-13 77.0 82 54.9
BcaB04g17738 Brassica carinata HOM05D000792 ORTHO05D001021 1.1e-12 76.6 50 70.0
Sp7g00770 Schrenkiella parvula HOM05D000792 ORTHO05D001021 1.1e-12 76.6 50 70.0
Carub.0007s3434 Capsella rubella HOM05D000792 ORTHO05D001021 5.4e-12 74.3 64 54.7
AL7G48380 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 2.7e-11 72.0 50 68.0
BraA04t17077Z Brassica rapa HOM05D000792 ORTHO05D001021 4.5e-11 71.2 50 68.0
C04p48200 Brassica napus HOM05D000792 ORTHO05D001021 5.9e-11 70.9 50 68.0
BolC4t26412H Brassica oleracea HOM05D000792 ORTHO05D001021 5.9e-11 70.9 50 68.0
A04p14170 Brassica napus HOM05D000792 ORTHO05D001021 1.0e-10 70.1 50 66.0
AL7G48430 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 2.3e-10 68.9 47 70.2
AT5G41120 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 2.3e-10 68.9 47 70.2
BcaB06g27600 Brassica carinata HOM05D000792 ORTHO05D001021 2.3e-10 68.9 50 66.0
Aa31LG9G710 Aethionema arabicum HOM05D000792 ORTHO05D001021 2.9e-10 68.6 64 48.4
CARHR213240 Cardamine hirsuta HOM05D000792 ORTHO05D001021 6.6e-10 67.4 50 62.0
Carub.0007s3437 Capsella rubella HOM05D000792 ORTHO05D001021 5.6e-09 64.3 47 68.1
BcaC06g31041 Brassica carinata HOM05D000792 ORTHO05D001021 3.0e-07 58.5 49 51.0
C02p53390 Brassica napus HOM05D000792 ORTHO05D001021 5.2e-07 57.8 49 49.0
THA.LOC104805313 Tarenaya hassleriana HOM05D000792 ORTHO05D001021 5.2e-07 57.8 50 52.0
CARHR213250 Cardamine hirsuta HOM05D000792 ORTHO05D001021 6.8e-07 57.4 50 54.0
A06p41720 Brassica napus HOM05D000792 ORTHO05D001021 1.2e-06 56.6 49 49.0
BraA06t27092Z Brassica rapa HOM05D000792 ORTHO05D001021 1.2e-06 56.6 49 49.0
AL5G15800 Arabidopsis lyrata HOM05D000792 ORTHO05D001021 1.5e-06 56.2 50 50.0
Sp2g15980 Schrenkiella parvula HOM05D000792 ORTHO05D001021 1.5e-06 56.2 49 49.0
BcaB07g30206 Brassica carinata HOM05D000792 ORTHO05D001021 2.0e-06 55.8 49 49.0
BolC7t44106H Brassica oleracea HOM05D000792 ORTHO05D001021 2.0e-06 55.8 49 46.9
Thhalv10003736m.g Eutrema salsugineum HOM05D000792 ORTHO05D001021 2.0e-06 55.8 49 49.0
BcaC03g17396 Brassica carinata HOM05D000792 ORTHO05D001021 2.6e-06 55.5 65 40.0
BcaC06g33886 Brassica carinata HOM05D000792 ORTHO05D001021 2.6e-06 55.5 49 46.9
C07p35900 Brassica napus HOM05D000792 ORTHO05D001021 2.6e-06 55.5 49 46.9
A02p34860 Brassica napus HOM05D000792 ORTHO05D001021 3.4e-06 55.1 49 46.9
A02p34820 Brassica napus HOM05D000792 ORTHO05D001021 4.4e-06 54.7 49 46.9
BraA02t08489Z Brassica rapa HOM05D000792 ORTHO05D001021 4.4e-06 54.7 49 46.9
BcaB07g30204 Brassica carinata HOM05D000792 ORTHO05D001021 5.7e-06 54.3 49 44.9
C02p53400 Brassica napus HOM05D000792 ORTHO05D001021 5.7e-06 54.3 49 46.9
CARHR147910 Cardamine hirsuta HOM05D000792 ORTHO05D001021 5.7e-06 54.3 50 48.0
Thhalv10003731m.g Eutrema salsugineum HOM05D000792 ORTHO05D001021 5.7e-06 54.3 50 46.0
AT3G26820 Arabidopsis thaliana HOM05D000792 ORTHO05D001021 7.5e-06 53.9 50 50.0
BcaC03g17394 Brassica carinata HOM05D000792 ORTHO05D001021 7.5e-06 53.9 49 46.9
BolC2t11415H Brassica oleracea HOM05D000792 ORTHO05D001021 7.5e-06 53.9 49 46.9
Aa31LG2G5720 Aethionema arabicum HOM05D000792 ORTHO05D001021 9.8e-06 53.5 63 44.4
A02p34830 Brassica napus HOM05D000792 ORTHO05D001021 9.8e-06 53.5 49 44.9
BraA02t08490Z Brassica rapa HOM05D000792 ORTHO05D001021 9.8e-06 53.5 49 44.9
QL02p070287 Quercus lobata HOM05D000792 ORTHO05D001021 9.8e-06 53.5 49 51.0
GSVIVG01033023001 Vitis vinifera HOM05D000792 ORTHO05D001021 9.8e-06 53.5 49 46.9


User provided reference genes

Program Settings