Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23039 Brassica carinata HOM05D001312 ORTHO05D001832 1.4e-60 236.1 120 100.0
BcaB05g23042 Brassica carinata HOM05D001312 ORTHO05D001832 5.7e-46 187.6 96 99.0
BcaB08g37000 Brassica carinata HOM05D001312 ORTHO05D001832 7.4e-30 134.0 97 77.3
BcaC04g19184 Brassica carinata HOM05D001312 ORTHO05D001832 1.3e-29 133.3 98 71.4
C09p64490 Brassica napus HOM05D001312 ORTHO05D001832 1.3e-29 133.3 98 71.4
BolC9t59283H Brassica oleracea HOM05D001312 ORTHO05D001832 1.3e-29 133.3 98 71.4
A10p25420 Brassica napus HOM05D001312 ORTHO05D001832 5.9e-27 124.4 98 69.4
BraA10t44606Z Brassica rapa HOM05D001312 ORTHO05D001832 1.3e-26 123.2 98 68.4
Thhalv10012427m.g Eutrema salsugineum HOM05D001312 ORTHO05D001832 6.7e-23 110.9 107 61.7
Aa31LG3G14830 Aethionema arabicum HOM05D001312 ORTHO05D001832 3.1e-20 102.1 107 59.8
CARHR200700 Cardamine hirsuta HOM05D001312 ORTHO05D001832 3.5e-19 98.6 98 60.2
Sp6g31240 Schrenkiella parvula HOM05D001312 ORTHO05D001832 1.0e-18 97.1 107 56.1
AT5G12400 Arabidopsis thaliana HOM05D001312 ORTHO05D001832 1.6e-16 89.7 102 52.9
AL6G23200 Arabidopsis lyrata HOM05D001312 ORTHO05D001832 6.1e-16 87.8 101 52.5
Carub.0006s1090 Capsella rubella HOM05D001312 ORTHO05D001832 6.8e-15 84.3 101 50.5
BolC3t13155H Brassica oleracea HOM05D001312 ORTHO05D001832 2.0e-11 72.8 54 72.2
BcaB01g05404 Brassica carinata HOM05D001312 ORTHO05D001832 1.7e-10 69.7 60 66.7
BraA03t09897Z Brassica rapa HOM05D001312 ORTHO05D001832 1.7e-10 69.7 54 68.5
A03p05600 Brassica napus HOM05D001312 ORTHO05D001832 2.3e-10 69.3 54 68.5
C03p06550 Brassica napus HOM05D001312 ORTHO05D001832 3.8e-10 68.6 53 69.8
BraA02t05132Z Brassica rapa HOM05D001312 ORTHO05D001832 2.1e-08 62.8 96 45.8
A02p01520 Brassica napus HOM05D001312 ORTHO05D001832 6.1e-08 61.2 96 44.8
Glyma.12G021900 Glycine max HOM05D001312 ORTHO05D001832 8.0e-08 60.8 75 42.7
BcaNung03620 Brassica carinata HOM05D001312 ORTHO05D001832 1.0e-07 60.5 81 50.6
Glyma.11G095800 Glycine max HOM05D001312 ORTHO05D001832 2.0e-06 56.2 75 38.7
BcaNung01192 Brassica carinata HOM05D001312 ORTHO05D001832 3.4e-06 55.5 79 46.8
BcaNung03617 Brassica carinata HOM05D001312 ORTHO05D001832 3.4e-06 55.5 79 46.8
BolC2t06519H Brassica oleracea HOM05D001312 ORTHO05D001832 3.4e-06 55.5 79 46.8
C02p05740 Brassica napus HOM05D001312 ORTHO05D001832 4.4e-06 55.1 79 45.6
Atru.chr3.2620 Acer truncatum HOM05D001312 ORTHO05D001832 5.7e-06 54.7 86 40.7
Phvul.011G023900 Phaseolus vulgaris HOM05D001312 ORTHO05D001832 5.7e-06 54.7 79 36.7
Dinv22150 Davidia involucrata HOM05D001312 ORTHO05D001832 7.5e-06 54.3 77 41.6
Manes.14G005800 Manihot esculenta HOM05D001312 ORTHO05D001832 7.5e-06 54.3 102 40.2
Prupe.4G257200 Prunus persica HOM05D001312 ORTHO05D001832 9.8e-06 53.9 83 38.6


User provided reference genes

Program Settings