Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 2.7e-46 188.3 99 100.0
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 2.2e-35 152.1 84 95.2
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 2.8e-35 151.8 82 96.3
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 3.1e-34 148.3 84 92.9
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 3.5e-33 144.8 80 93.8
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 4.5e-33 144.4 83 91.6
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 6.6e-32 140.6 84 86.9
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 1.9e-31 139.0 84 85.7
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 2.8e-30 135.2 90 82.2
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 3.6e-30 134.8 83 84.3
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 4.7e-30 134.4 80 87.5
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 7.5e-28 127.1 68 97.1
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 2.9e-27 125.2 73 89.0
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 3.5e-25 118.2 84 75.0
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 4.6e-25 117.9 84 73.8
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 5.9e-25 117.5 84 73.8
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 7.8e-25 117.1 84 73.8
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 1.3e-24 116.3 84 73.8
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-24 116.3 84 73.8
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-24 115.9 84 72.6
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 2.3e-24 115.5 84 72.6
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 3.0e-24 115.2 84 72.6
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 3.9e-24 114.8 84 73.8
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 3.9e-24 114.8 83 73.5
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 3.9e-24 114.8 84 72.6
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 6.6e-24 114.0 79 74.7
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 8.6e-24 113.6 78 76.9
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-23 113.2 79 74.7
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 1.5e-23 112.8 86 70.9
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 1.9e-23 112.5 84 71.4
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 2.5e-23 112.1 74 78.4
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 3.3e-23 111.7 84 71.4
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 3.3e-23 111.7 78 75.6
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 3.3e-23 111.7 77 76.6
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 4.3e-23 111.3 85 69.4
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 1.6e-22 109.4 87 66.7
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 1.6e-22 109.4 86 68.6
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 1.6e-22 109.4 83 69.9
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 2.1e-22 109.0 78 73.1
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 2.1e-22 109.0 78 74.4
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 2.1e-22 109.0 86 68.6
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 2.8e-22 108.6 86 68.6
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 3.6e-22 108.2 78 73.1
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 4.7e-22 107.8 83 68.7
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 8.0e-22 107.1 74 77.0
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.1e-21 106.7 74 75.7
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 1.4e-21 106.3 74 77.0
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-21 106.3 86 67.4
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 1.8e-21 105.9 74 75.7
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 3.1e-21 105.1 86 67.4
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 4.0e-21 104.8 74 75.7
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 4.0e-21 104.8 74 75.7
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 4.0e-21 104.8 70 77.1
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 5.2e-21 104.4 74 75.7
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 6.8e-21 104.0 74 75.7
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 8.9e-21 103.6 95 61.1
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 8.9e-21 103.6 77 71.4
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 8.9e-21 103.6 89 62.9
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 3.4e-20 101.7 76 71.1
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 3.4e-20 101.7 76 71.1
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 4.4e-20 101.3 73 74.0
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 4.4e-20 101.3 86 64.0
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 5.8e-20 100.9 78 69.2
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 1.1e-18 96.7 86 62.8
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-18 96.3 85 63.5
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 1.9e-18 95.9 86 61.6
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 3.2e-18 95.1 86 61.6
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 4.1e-18 94.7 82 64.6
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 7.0e-18 94.0 69 71.0
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 9.2e-18 93.6 86 60.5
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 9.2e-18 93.6 83 63.9
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 1.2e-17 93.2 86 60.5
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.2e-17 93.2 71 70.4
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 1.6e-17 92.8 90 63.3
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 1.0e-16 90.1 83 60.2
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 1.7e-16 89.4 86 58.1
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 6.6e-16 87.4 84 64.3
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 6.6e-16 87.4 85 62.4
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 1.1e-15 86.7 55 83.6
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 1.1e-15 86.7 86 54.7
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.5e-15 86.3 85 62.4
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 2.5e-15 85.5 90 54.4
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 3.3e-15 85.1 85 61.2
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 7.3e-15 84.0 75 68.0
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 1.2e-14 83.2 93 52.7
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 2.8e-14 82.0 81 64.2
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 4.7e-14 81.3 82 54.9
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 6.2e-14 80.9 56 76.8
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 1.4e-13 79.7 84 51.2
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 1.4e-13 79.7 84 52.4
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 1.4e-13 79.7 82 53.7
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 1.8e-13 79.3 43 95.3
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 2.3e-13 79.0 98 45.9
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 2.3e-13 79.0 49 85.7
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 3.1e-13 78.6 95 53.7
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 3.1e-13 78.6 84 52.4
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 3.1e-13 78.6 68 66.2
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 4.0e-13 78.2 46 89.1
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 4.0e-13 78.2 86 48.8
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 5.2e-13 77.8 72 54.2
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 8.9e-13 77.0 54 77.8
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 8.9e-13 77.0 73 54.8
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 1.5e-12 76.3 84 50.0
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 2.0e-12 75.9 49 81.6
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 2.6e-12 75.5 73 53.4
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 9.9e-12 73.6 75 64.0
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 1.7e-11 72.8 76 53.9
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 1.7e-11 72.8 49 79.6
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 3.7e-11 71.6 92 47.8
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 6.4e-11 70.9 60 63.3
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 8.3e-11 70.5 60 63.3
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 2.4e-10 68.9 72 52.8
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 5.4e-10 67.8 80 48.8
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 7.1e-10 67.4 86 45.3
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 7.1e-10 67.4 54 66.7
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 9.2e-10 67.0 81 48.1
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 1.2e-09 66.6 52 73.1
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 1.6e-09 66.2 76 48.7
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 2.7e-09 65.5 82 47.6
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 1.5e-07 59.7 52 59.6
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 4.3e-07 58.2 63 49.2
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 7.3e-07 57.4 54 61.1
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 9.5e-07 57.0 40 75.0
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 6.2e-06 54.3 57 50.9


User provided reference genes

Program Settings