Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22904 Brassica carinata HOM05D000313 ORTHO05D032007 4.4e-43 177.6 90 100.0
C08p10540 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-17 91.3 67 74.6
BolC1t02301H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-15 85.5 67 71.6
BcaC04g20831 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-15 85.1 72 62.5
BcaC05g27418 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-14 83.2 78 53.8
A02p31310 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-14 83.2 72 55.6
C06p05530 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-14 82.8 71 57.7
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-13 79.0 71 57.7
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-13 78.6 72 51.4
C03p75780 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-13 78.6 89 51.7
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-13 78.2 71 59.2
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-13 78.2 72 54.2
A09p44770 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-13 77.8 72 55.6
A10p14410 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-13 77.8 73 50.7
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-13 77.4 72 51.4
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-13 77.4 72 51.4
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 6.2e-13 77.4 72 51.4
BcaC05g28354 Brassica carinata HOM05D000313 ORTHO05D000065 8.1e-13 77.0 71 56.3
BcaC07g37360 Brassica carinata HOM05D000313 ORTHO05D000065 8.1e-13 77.0 71 57.7
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 8.1e-13 77.0 71 57.7
BcaC07g37625 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-12 76.6 71 56.3
BcaC02g10698 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-12 75.9 62 66.1
BcaC03g13942 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-12 75.9 71 54.9
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-12 75.9 71 54.9
BcaC08g44549 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-12 75.9 72 51.4
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-12 75.9 71 54.9
C03p73930 Brassica napus HOM05D000313 ORTHO05D018464 1.8e-12 75.9 70 51.4
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-12 75.9 71 54.9
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-12 75.9 71 54.9
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-12 74.7 74 54.1
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-12 74.7 71 53.5
C02p44680 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-12 74.7 71 53.5
BraA05t20927Z Brassica rapa HOM05D000313 ORTHO05D000065 4.0e-12 74.7 72 54.2
BcaB02g10989 Brassica carinata HOM05D000313 ORTHO05D000065 5.3e-12 74.3 72 52.8
A08p04810 Brassica napus HOM05D000313 ORTHO05D000065 5.3e-12 74.3 72 50.0
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 6.9e-12 73.9 72 50.0
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 6.9e-12 73.9 71 52.1
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-12 73.9 70 52.9
C07p25920 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-12 73.9 67 56.7
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-12 73.9 72 50.0
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-12 73.9 72 50.0
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-12 73.9 71 52.1
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 9.0e-12 73.6 72 52.8
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 9.0e-12 73.6 70 51.4
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 9.0e-12 73.6 72 52.8
BcaC09g48632 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-11 73.2 80 52.5
BcaB01g02353 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-11 72.8 79 49.4
BcaC08g44234 Brassica carinata HOM05D000313 ORTHO05D021705 1.5e-11 72.8 72 51.4
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-11 72.8 72 48.6
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-11 72.8 72 51.4
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-11 72.8 70 52.9
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-11 72.8 72 51.4
BraA05t21034Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-11 72.8 72 48.6
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-11 72.4 72 48.6
C03p72030 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-11 72.4 67 53.7
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-11 72.4 72 51.4
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-11 72.4 72 51.4
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 3.4e-11 71.6 69 50.7
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-11 71.6 81 46.9
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-11 71.6 72 51.4
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 4.4e-11 71.2 72 50.0
A03p45920 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-11 71.2 72 50.0
A09p22770 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-11 71.2 69 50.7
A09p25990 Brassica napus HOM05D000313 ORTHO05D032007 4.4e-11 71.2 67 55.2
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-11 71.2 72 48.6
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-11 71.2 72 50.0
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 4.4e-11 71.2 72 50.0
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 4.4e-11 71.2 72 47.2
BolC6t36221H Brassica oleracea HOM05D000313 ORTHO05D000065 4.4e-11 71.2 72 48.6
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 4.4e-11 71.2 72 48.6
BcaC01g05658 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-11 70.9 67 53.7
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-11 70.9 72 51.4
BcaC09g50908 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-11 70.9 65 56.9
C01p38920 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-11 70.9 72 48.6
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-11 70.9 72 50.0
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-11 70.9 72 47.2
BolC1t03161H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-11 70.9 71 50.7
BolC1t03842H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-11 70.9 72 48.6
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-11 70.9 74 51.4
A03p13160 Brassica napus HOM05D000313 ORTHO05D000065 7.6e-11 70.5 75 46.7
C04p18340 Brassica napus HOM05D000313 ORTHO05D000065 7.6e-11 70.5 72 50.0
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 7.6e-11 70.5 75 45.3
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 7.6e-11 70.5 71 53.5
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 9.9e-11 70.1 72 48.6
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 9.9e-11 70.1 72 50.0
C08p33820 Brassica napus HOM05D000313 ORTHO05D021705 9.9e-11 70.1 72 50.0
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 9.9e-11 70.1 72 48.6
BraA07t28621Z Brassica rapa HOM05D000313 ORTHO05D021705 9.9e-11 70.1 72 50.0
C04p20230 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-10 69.7 70 54.3
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-10 69.7 70 50.0
BolC2t10368H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-10 69.7 66 57.6
BolC4t23561H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-10 69.7 70 54.3
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-10 69.3 72 50.0
A05p19140 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-10 69.3 72 47.2
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-10 69.3 72 50.0
BolC3t19501H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-10 69.3 67 52.2
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-10 69.3 72 48.6
BcaC03g16503 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-10 68.9 66 57.6
BcaC03g17702 Brassica carinata HOM05D028571 ORTHO05D027637 2.2e-10 68.9 70 60.0
A02p30140 Brassica napus HOM05D000313 ORTHO05D021705 2.2e-10 68.9 72 48.6
C01p23580 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-10 68.9 56 71.4
C01p47570 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-10 68.9 77 51.9
C02p43200 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-10 68.9 66 57.6
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-10 68.9 72 48.6
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-10 68.9 72 45.8
BolC8t47994H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-10 68.9 68 54.4
BcaB02g07631 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-10 68.2 72 51.4
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-10 68.2 71 52.1
C09p38710 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-10 68.2 46 71.7
BolC9t56725H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-10 68.2 46 71.7
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-10 67.8 69 47.8
BcaC02g11117 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-10 67.8 68 54.4
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-10 67.8 72 47.2
BraA10t43815Z Brassica rapa HOM05D000313 ORTHO05D000065 4.9e-10 67.8 68 50.0
A09p20060 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-10 67.4 72 47.2
BolC1t04726H Brassica oleracea HOM05D000313 ORTHO05D000065 6.4e-10 67.4 77 50.6
BcaC06g30789 Brassica carinata HOM05D000313 ORTHO05D000065 8.4e-10 67.0 73 45.2
BolC8t46955H Brassica oleracea HOM05D000313 ORTHO05D000065 8.4e-10 67.0 67 49.3
BraA04t16524Z Brassica rapa HOM05D000313 ORTHO05D000065 8.4e-10 67.0 81 48.1
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-09 66.6 72 47.2
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-09 66.6 72 47.2
A01p25830 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-09 66.2 68 52.9
BcaC03g16075 Brassica carinata HOM05D000022 ORTHO05D013684 1.9e-09 65.9 72 47.2
BolC2t09854H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-09 65.9 72 47.2
BcaC05g27194 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-09 65.5 75 44.0
C02p36380 Brassica napus HOM05D000313 ORTHO05D027637 3.2e-09 65.1 67 59.7
C07p31390 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-09 65.1 59 55.9
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-09 64.7 72 44.4
BcaC06g34226 Brassica carinata HOM05D000313 ORTHO05D000065 5.4e-09 64.3 74 50.0
C02p57070 Brassica napus HOM05D000313 ORTHO05D027637 5.4e-09 64.3 67 58.2
BraA05t20559Z Brassica rapa HOM05D000313 ORTHO05D000065 5.4e-09 64.3 72 45.8
BcaC07g37331 Brassica carinata HOM05D000313 ORTHO05D000065 7.1e-09 63.9 65 55.4
BcaC09g48120 Brassica carinata HOM05D000313 ORTHO05D000065 7.1e-09 63.9 47 68.1
C08p07700 Brassica napus HOM05D000313 ORTHO05D000065 7.1e-09 63.9 65 55.4
BolC8t47617H Brassica oleracea HOM05D000313 ORTHO05D000065 7.1e-09 63.9 65 55.4
BcaC03g17052 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-09 63.5 69 49.3
A01p37550 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-09 63.5 57 54.4
A02p22940 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-09 63.5 76 42.1
A03p56240 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-09 63.5 76 42.1
A03p61810 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-09 63.5 64 48.4
A02p13460 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-08 63.2 63 52.4
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-08 62.0 71 42.3
BcaC02g08922 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-08 62.0 72 47.2
C07p05650 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-08 62.0 52 61.5
BolC7t40964H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-08 62.0 52 61.5
BolC5t31824H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-08 61.6 71 43.7
C09p40090 Brassica napus HOM05D000313 ORTHO05D000065 4.6e-08 61.2 67 50.7
BolC9t56903H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-08 61.2 67 50.7
BraA05t20817Z Brassica rapa HOM05D000313 ORTHO05D000065 4.6e-08 61.2 64 46.9
BolC7t43682H Brassica oleracea HOM05D000313 ORTHO05D000065 7.8e-08 60.5 46 63.0
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-07 59.7 72 38.9
BcaC06g34648 Brassica carinata HOM05D016482 ORTHO05D032447 1.3e-07 59.7 41 70.7
BolC7t43114H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-07 59.7 46 63.0
BcaC02g10977 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-07 58.9 63 47.6
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-07 58.5 69 43.5
C08p27490 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-07 58.5 61 50.8
BcaC02g08756 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-07 58.2 49 61.2
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-07 58.2 51 56.9
C07p31940 Brassica napus HOM05D000313 ORTHO05D024167 5.1e-07 57.8 75 45.3
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-07 57.4 79 40.5
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-07 57.4 72 43.1
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 6.6e-07 57.4 72 43.1
BcaC04g20706 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-06 56.6 63 49.2
C03p83360 Brassica napus HOM05D016501 ORTHO05D033608 1.1e-06 56.6 40 67.5
BraA05t19975Z Brassica rapa HOM05D000313 ORTHO05D018550 1.5e-06 56.2 58 53.4
BraA02t06404Z Brassica rapa HOM05D000313 ORTHO05D000065 1.9e-06 55.8 46 58.7
BolC8t48023H Brassica oleracea HOM05D000313 ORTHO05D024167 3.3e-06 55.1 69 46.4
BcaB06g28775 Brassica carinata HOM05D016264 ORTHO05D017538 5.6e-06 54.3 66 48.5
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 5.6e-06 54.3 70 42.9
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 5.6e-06 54.3 70 42.9
BraA01t02525Z Brassica rapa HOM05D000313 ORTHO05D032007 5.6e-06 54.3 34 79.4
BcaNung00668 Brassica carinata HOM05D000313 ORTHO05D018550 7.3e-06 53.9 38 68.4
A09p39400 Brassica napus HOM05D000313 ORTHO05D018550 7.3e-06 53.9 38 68.4
C04p29350 Brassica napus HOM05D000313 ORTHO05D018550 7.3e-06 53.9 38 68.4
BolC4t24469H Brassica oleracea HOM05D000313 ORTHO05D018550 7.3e-06 53.9 38 68.4
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 9.6e-06 53.5 71 39.4
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-06 53.5 70 41.4
BolC3t20617H Brassica oleracea HOM05D000313 ORTHO05D033608 9.6e-06 53.5 48 60.4
BolC5t31793H Brassica oleracea HOM05D000313 ORTHO05D033608 9.6e-06 53.5 48 60.4
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 9.6e-06 53.5 68 39.7


User provided reference genes

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