Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22892 Brassica carinata HOM05D005426 ORTHO05D095396 8.6e-148 526.9 263 100.0
BcaB04g17089 Brassica carinata HOM05D131151 ORTHO05D093167 8.1e-21 105.1 152 47.4
BcaB02g06947 Brassica carinata HOM05D005426 ORTHO05D006996 5.8e-11 72.4 216 32.9
A07p32800 Brassica napus HOM05D005426 ORTHO05D006996 6.4e-10 68.9 117 42.7
BraA07t30907Z Brassica rapa HOM05D005426 ORTHO05D006996 6.4e-10 68.9 117 42.7
CARHR056990 Cardamine hirsuta HOM05D005426 ORTHO05D006996 6.4e-10 68.9 116 43.1
C06p39010 Brassica napus HOM05D005426 ORTHO05D006996 8.4e-10 68.6 117 42.7
BolC6t38993H Brassica oleracea HOM05D005426 ORTHO05D006996 8.4e-10 68.6 117 42.7
BcaNung05534 Brassica carinata HOM05D005426 ORTHO05D006996 1.1e-09 68.2 118 42.4
Aa31LG2G2420 Aethionema arabicum HOM05D005426 ORTHO05D006996 1.4e-09 67.8 116 42.2
AL2G21140 Arabidopsis lyrata HOM05D005426 ORTHO05D006996 5.5e-09 65.9 116 41.4
AT1G65320 Arabidopsis thaliana HOM05D005426 ORTHO05D006996 5.5e-09 65.9 116 41.4
Carub.0002s1099 Capsella rubella HOM05D005426 ORTHO05D006996 7.1e-09 65.5 117 41.0
BcaB07g32511 Brassica carinata HOM05D005426 ORTHO05D006996 9.3e-09 65.1 96 45.8
THA.LOC104805695 Tarenaya hassleriana HOM05D005426 ORTHO05D006996 9.3e-09 65.1 118 39.8
Thhalv10018605m.g Eutrema salsugineum HOM05D005426 ORTHO05D006996 1.2e-08 64.7 116 41.4
Sp5g19990 Schrenkiella parvula HOM05D005426 ORTHO05D006996 1.2e-08 64.7 116 41.4
THA.LOC104821953 Tarenaya hassleriana HOM05D005426 ORTHO05D006996 4.6e-08 62.8 118 39.0
THA.LOC104823814 Tarenaya hassleriana HOM05D005426 ORTHO05D006996 4.6e-08 62.8 105 41.9
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 3.0e-07 60.1 58 55.2
Sabra19G0062300 Salix brachista HOM05D005426 ORTHO05D006996 5.1e-07 59.3 127 37.8
Cpa.g.sc123.2 Carica papaya HOM05D005426 ORTHO05D006996 8.7e-07 58.5 136 35.3
Potri.019G052650 Populus trichocarpa HOM05D005426 ORTHO05D006996 8.7e-07 58.5 114 39.5
BolC7t42744H Brassica oleracea HOM05D001308 ORTHO05D000401 1.5e-06 57.8 51 64.7
HanXRQChr05g0156971 Helianthus annuus HOM05D005426 ORTHO05D006996 1.5e-06 57.8 115 38.3
BcaB04g17522 Brassica carinata HOM05D005426 ORTHO05D006996 1.9e-06 57.4 86 45.3
Atru.chr12.1803 Acer truncatum HOM05D005426 ORTHO05D006996 2.5e-06 57.0 102 40.2
Atru.chr12.1804 Acer truncatum HOM05D005426 ORTHO05D006996 2.5e-06 57.0 102 40.2
CiPaw.07G079000 Carya illinoinensis HOM05D005426 ORTHO05D006996 2.5e-06 57.0 117 38.5
COL.COLO4_27402 Corchorus olitorius HOM05D005426 ORTHO05D006996 2.5e-06 57.0 114 39.5
Manes.09G184500 Manihot esculenta HOM05D005426 ORTHO05D006996 7.4e-06 55.5 114 37.7
ECA233G3371 Erigeron canadensis HOM05D005426 ORTHO05D006996 9.6e-06 55.1 116 36.2
Nn3g20159 Nelumbo nucifera HOM05D005426 ORTHO05D006996 9.6e-06 55.1 109 38.5


User provided reference genes

Program Settings