Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22883 Brassica carinata HOM05D009305 ORTHO05D010439 3.0e-41 171.4 86 100.0
A02p05990 Brassica napus HOM05D009305 ORTHO05D010439 7.7e-37 156.8 86 94.2
BraA02t05551Z Brassica rapa HOM05D009305 ORTHO05D010439 7.7e-37 156.8 86 94.2
BcaC03g13728 Brassica carinata HOM05D009305 ORTHO05D010439 5.5e-35 150.6 81 93.8
BolC2t07005H Brassica oleracea HOM05D009305 ORTHO05D010439 5.5e-35 150.6 81 93.8
C03p11370 Brassica napus HOM05D009305 ORTHO05D010439 2.6e-32 141.7 76 89.5
BolC3t13610H Brassica oleracea HOM05D009305 ORTHO05D010439 7.4e-32 140.2 76 88.2
A03p09790 Brassica napus HOM05D009305 ORTHO05D010439 1.3e-31 139.4 76 88.2
BraA03t10294Z Brassica rapa HOM05D009305 ORTHO05D010439 1.3e-31 139.4 76 88.2
BcaB01g04814 Brassica carinata HOM05D009305 ORTHO05D010439 1.7e-31 139.0 76 88.2
Thhalv10015177m.g Eutrema salsugineum HOM05D009305 ORTHO05D010439 3.1e-30 134.8 76 85.5
AL6G31590 Arabidopsis lyrata HOM05D009305 ORTHO05D010439 4.5e-29 131.0 75 85.3
CARHR192790 Cardamine hirsuta HOM05D009305 ORTHO05D010439 1.0e-28 129.8 74 89.2
AT5G20045 Arabidopsis thaliana HOM05D009305 ORTHO05D010439 3.8e-28 127.9 75 84.0
Carub.0006s1842 Capsella rubella HOM05D009305 ORTHO05D010439 1.1e-22 109.8 73 78.1
BNapus_Darmor_BZH_scaffold_38p01850 Brassica napus HOM05D009305 ORTHO05D010439 2.1e-18 95.5 64 76.6
Aa31LG1G14180 Aethionema arabicum HOM05D009305 ORTHO05D010439 8.0e-18 93.6 73 63.0
THA.LOC104811040 Tarenaya hassleriana HOM05D009305 ORTHO05D010439 1.4e-14 82.8 72 59.7
CiPaw.04G169500 Carya illinoinensis HOM05D009305 ORTHO05D010439 6.8e-09 63.9 86 47.7
RcHm_v2.0_Chr2g0089271 Rosa chinensis HOM05D009305 ORTHO05D010439 2.6e-08 62.0 90 44.4
FAN26G0439 Fragaria x ananassa HOM05D009305 ORTHO05D010439 4.4e-08 61.2 90 43.3
Manes.11G101800 Manihot esculenta HOM05D009305 ORTHO05D010439 4.4e-08 61.2 84 44.0
Atru.chr7.1234 Acer truncatum HOM05D009305 ORTHO05D010439 5.7e-08 60.8 92 44.6
QL02p087437 Quercus lobata HOM05D009305 ORTHO05D010439 5.7e-08 60.8 82 43.9
DCAR_009212 Daucus carota HOM05D000639 ORTHO05D005966 7.5e-08 60.5 88 38.6
Prupe.7G238200 Prunus persica HOM05D009305 ORTHO05D010439 7.5e-08 60.5 90 45.6
TAR625G0712 Trochodendron aralioides HOM05D003010 ORTHO05D010439 1.7e-07 59.3 84 44.0
FAN19G2542 Fragaria x ananassa HOM05D009305 ORTHO05D010439 2.8e-07 58.5 89 40.4
arahy.Tifrunner.gnm1.ann1.0EDZ2A Arachis hypogaea HOM05D009305 ORTHO05D010439 4.9e-07 57.8 95 45.3
Potri.008G015800 Populus trichocarpa HOM05D003010 ORTHO05D010439 4.9e-07 57.8 83 42.2
Aqoxy7G02055 Aquilegia oxysepala HOM05D003010 ORTHO05D003623 6.3e-07 57.4 80 45.0
PSO339G5114 Papaver somniferum HOM05D003010 ORTHO05D010439 6.3e-07 57.4 85 37.6
PSO801G0586 Papaver somniferum HOM05D003010 ORTHO05D003623 6.3e-07 57.4 85 37.6
Nn8g39368 Nelumbo nucifera HOM05D003010 ORTHO05D010439 8.3e-07 57.0 81 42.0
Eucgr.C01116 Eucalyptus grandis HOM05D009305 ORTHO05D010439 1.8e-06 55.8 85 43.5
CSS0003493 Camellia sinensis var. sinensis HOM05D018231 ORTHO05D010439 2.4e-06 55.5 85 41.2
Duzib205G1418 Durio zibethinus HOM05D003010 ORTHO05D003623 4.1e-06 54.7 86 41.9
Cfa003337 Carpinus fangiana HOM05D003010 ORTHO05D010439 5.4e-06 54.3 89 40.4
Migut.A01045 Erythranthe guttata HOM05D003010 ORTHO05D003623 5.4e-06 54.3 77 44.2
Potri.008G015100 Populus trichocarpa HOM05D003010 ORTHO05D010439 9.2e-06 53.5 76 46.1
Rhsim01G0078400 Rhododendron simsii HOM05D003010 ORTHO05D010439 9.2e-06 53.5 104 37.5


User provided reference genes

Program Settings