Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22881 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-63 246.1 116 100.0
BcaB07g33212 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-53 211.8 110 90.0
BcaB05g22949 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-50 202.6 110 87.3
BcaB01g01370 Brassica carinata HOM05D001498 ORTHO05D008559 2.9e-47 191.8 110 83.6
BcaB06g26316 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-44 183.0 112 75.9
BcaB05g24510 Brassica carinata HOM05D001498 ORTHO05D008559 8.8e-44 180.3 112 77.7
BcaB06g26679 Brassica carinata HOM05D001498 ORTHO05D008559 3.3e-43 178.3 112 74.1
BraA03t15279Z Brassica rapa HOM05D001498 ORTHO05D008559 4.3e-43 177.9 112 74.1
BcaB04g17595 Brassica carinata HOM05D001498 ORTHO05D008559 1.7e-42 176.0 86 93.0
BraA01t02472Z Brassica rapa HOM05D001498 ORTHO05D008559 4.8e-42 174.5 112 72.3
BraA01t01574Z Brassica rapa HOM05D001498 ORTHO05D008559 8.2e-42 173.7 112 71.4
BolC5t33265H Brassica oleracea HOM05D001498 ORTHO05D008559 1.4e-41 172.9 112 71.4
BcaC05g28455 Brassica carinata HOM05D001498 ORTHO05D008559 1.8e-41 172.6 112 71.4
BcaB07g33942 Brassica carinata HOM05D001498 ORTHO05D008559 4.1e-41 171.4 112 73.2
BolC4t26384H Brassica oleracea HOM05D001498 ORTHO05D008559 6.9e-41 170.6 112 70.5
BcaC06g35693 Brassica carinata HOM05D001498 ORTHO05D008559 9.1e-41 170.2 112 71.4
BolC3t20363H Brassica oleracea HOM05D001498 ORTHO05D008559 9.1e-41 170.2 112 70.5
BolC5t32332H Brassica oleracea HOM05D001498 ORTHO05D008559 1.2e-40 169.9 112 69.6
BcaC02g12296 Brassica carinata HOM05D001498 ORTHO05D008559 3.4e-40 168.3 112 70.5
BcaB06g27204 Brassica carinata HOM05D001498 ORTHO05D008559 7.7e-40 167.2 104 72.1
BcaC06g35772 Brassica carinata HOM05D001498 ORTHO05D008559 7.7e-40 167.2 112 69.6
BolC7t41574H Brassica oleracea HOM05D001498 ORTHO05D008559 7.7e-40 167.2 112 69.6
BcaB01g01186 Brassica carinata HOM05D001498 ORTHO05D008559 1.7e-39 166.0 109 72.5
BcaB04g17610 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-39 165.6 109 72.5
BcaB05g23794 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-39 165.6 108 72.2
BcaC06g36175 Brassica carinata HOM05D001498 ORTHO05D008559 2.9e-39 165.2 112 68.8
BolC6t36794H Brassica oleracea HOM05D001498 ORTHO05D008559 4.2e-38 161.4 112 67.9
BolC8t49594H Brassica oleracea HOM05D001498 ORTHO05D008559 5.5e-38 161.0 112 67.9
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-37 159.5 110 68.2
BcaB05g23075 Brassica carinata HOM05D001498 ORTHO05D008559 3.6e-37 158.3 109 67.9
BcaB07g33318 Brassica carinata HOM05D001498 ORTHO05D008559 3.6e-37 158.3 109 68.8
BcaC05g27520 Brassica carinata HOM05D001498 ORTHO05D008559 4.7e-37 157.9 109 67.0
BcaC08g44374 Brassica carinata HOM05D001498 ORTHO05D008559 4.7e-37 157.9 109 67.0
BraA03t14503Z Brassica rapa HOM05D001498 ORTHO05D008559 4.7e-37 157.9 109 67.0
BraA09t40147Z Brassica rapa HOM05D001498 ORTHO05D008559 4.7e-37 157.9 109 67.0
BolC3t16975H Brassica oleracea HOM05D001498 ORTHO05D008559 6.1e-37 157.5 109 66.1
BcaC09g48840 Brassica carinata HOM05D001498 ORTHO05D008559 7.9e-37 157.1 121 62.8
BcaB06g26482 Brassica carinata HOM05D001498 ORTHO05D008559 1.0e-36 156.8 109 67.0
BcaC05g26788 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-36 156.4 109 67.0
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.8e-36 156.0 110 65.5
BcaB05g23540 Brassica carinata HOM05D001498 ORTHO05D008559 2.3e-36 155.6 109 67.0
BolC2t11287H Brassica oleracea HOM05D001498 ORTHO05D008559 2.3e-36 155.6 109 66.1
BcaB03g16805 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-36 155.2 109 66.1
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 3.0e-36 155.2 110 65.5
BcaB06g26728 Brassica carinata HOM05D001498 ORTHO05D008559 3.9e-36 154.8 109 66.1
BcaB06g26762 Brassica carinata HOM05D001498 ORTHO05D008559 3.9e-36 154.8 109 67.0
BcaB07g33755 Brassica carinata HOM05D001498 ORTHO05D008559 3.9e-36 154.8 109 66.1
BcaC07g39106 Brassica carinata HOM05D001498 ORTHO05D008559 3.9e-36 154.8 109 66.1
BcaB04g17975 Brassica carinata HOM05D001498 ORTHO05D008559 5.1e-36 154.5 109 66.1
BcaB05g23076 Brassica carinata HOM05D001498 ORTHO05D008559 5.1e-36 154.5 109 66.1
BcaC04g22430 Brassica carinata HOM05D001498 ORTHO05D008559 5.1e-36 154.5 109 64.2
BcaC08g44055 Brassica carinata HOM05D001498 ORTHO05D008559 6.7e-36 154.1 109 65.1
BcaB05g23432 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-35 153.3 119 62.2
BcaB01g01483 Brassica carinata HOM05D001498 ORTHO05D008559 1.5e-35 152.9 109 67.0
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 1.5e-35 152.9 110 63.6
BcaB05g23121 Brassica carinata HOM05D001498 ORTHO05D008559 2.6e-35 152.1 109 65.1
BcaC08g43732 Brassica carinata HOM05D001498 ORTHO05D008559 2.6e-35 152.1 109 65.1
BcaB02g11278 Brassica carinata HOM05D001498 ORTHO05D008559 4.4e-35 151.4 109 65.1
BcaB06g26760 Brassica carinata HOM05D002776 ORTHO05D008559 5.7e-35 151.0 106 67.0
BcaB04g17679 Brassica carinata HOM05D001498 ORTHO05D008559 7.4e-35 150.6 109 64.2
BcaC04g19550 Brassica carinata HOM05D001498 ORTHO05D008559 7.4e-35 150.6 109 64.2
BcaB07g32914 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-34 149.8 109 65.1
BcaB07g32209 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-34 149.1 109 65.1
BcaC05g26790 Brassica carinata HOM05D001498 ORTHO05D008559 2.8e-34 148.7 109 65.1
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 3.7e-34 148.3 103 67.0
BcaB06g27857 Brassica carinata HOM05D001498 ORTHO05D008559 3.7e-34 148.3 109 63.3
BcaB01g03186 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-33 146.7 109 63.3
BcaB03g16073 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-33 146.7 100 67.0
BcaB07g33219 Brassica carinata HOM05D001498 ORTHO05D008559 2.4e-33 145.6 109 65.1
BraSC37t46120Z Brassica rapa HOM05D001498 ORTHO05D008559 3.1e-33 145.2 82 76.8
BcaC01g02506 Brassica carinata HOM05D001498 ORTHO05D008559 4.1e-33 144.8 109 63.3
BcaC09g48601 Brassica carinata HOM05D001498 ORTHO05D008559 7.7e-32 140.6 112 61.6
BcaNung05286 Brassica carinata HOM05D001498 ORTHO05D008559 1.0e-31 140.2 109 62.4
BcaC06g36449 Brassica carinata HOM05D001498 ORTHO05D008559 5.0e-31 137.9 97 64.9
BcaB07g33083 Brassica carinata HOM05D001498 ORTHO05D008559 8.5e-31 137.1 100 67.0
BcaC07g38656 Brassica carinata HOM05D001498 ORTHO05D008559 8.5e-31 137.1 112 58.0
BcaB01g01310 Brassica carinata HOM05D001498 ORTHO05D008559 1.5e-30 136.3 96 65.6
BcaB04g18490 Brassica carinata HOM05D001498 ORTHO05D008559 5.2e-28 127.9 112 58.0
BcaB06g27025 Brassica carinata HOM05D001498 ORTHO05D008559 1.5e-27 126.3 82 68.3
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 1.5e-27 126.3 111 54.1
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 7.4e-27 124.0 85 65.9
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-26 123.2 85 64.7
BcaB01g02582 Brassica carinata HOM05D001498 ORTHO05D008559 4.1e-25 118.2 60 81.7
BcaC01g03922 Brassica carinata HOM05D001498 ORTHO05D008559 5.3e-25 117.9 79 67.1
BcaC05g27621 Brassica carinata HOM05D001498 ORTHO05D008559 7.0e-25 117.5 109 56.9
BcaC06g36228 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-24 116.3 110 50.9
BolC1t04765H Brassica oleracea HOM05D001498 ORTHO05D008559 1.6e-24 116.3 60 81.7
BcaB04g17364 Brassica carinata HOM05D001498 ORTHO05D008559 7.7e-24 114.0 58 81.0
BcaC01g02040 Brassica carinata HOM05D001498 ORTHO05D008559 2.9e-23 112.1 96 53.1
BcaC07g37924 Brassica carinata HOM05D001498 ORTHO05D008559 2.9e-23 112.1 108 50.9
C03p69240 Brassica napus HOM05D008414 ORTHO05D008559 8.5e-23 110.5 81 59.3
BcaB04g18117 Brassica carinata HOM05D001498 ORTHO05D008559 1.5e-22 109.8 88 62.5
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 2.5e-22 109.0 112 50.9
BolC1t03832H Brassica oleracea HOM05D001498 ORTHO05D008559 5.5e-22 107.8 110 46.4
BcaC01g01872 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-21 106.7 110 48.2
BolC9t57109H Brassica oleracea HOM05D001498 ORTHO05D008559 1.6e-21 106.3 110 44.5
BcaC05g27664 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-21 105.5 110 44.5
BolC7t40933H Brassica oleracea HOM05D001498 ORTHO05D008559 2.7e-21 105.5 110 45.5
BolC9t57419H Brassica oleracea HOM05D001498 ORTHO05D008559 2.7e-21 105.5 102 50.0
BcaC05g25871 Brassica carinata HOM05D001498 ORTHO05D008559 3.6e-21 105.1 66 68.2
BcaC04g20283 Brassica carinata HOM05D001498 ORTHO05D008559 4.0e-20 101.7 102 49.0
BcaB05g24681 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-19 99.4 57 71.9
BcaB07g33756 Brassica carinata HOM05D001498 ORTHO05D003542 2.0e-19 99.4 69 66.7
BcaC04g19842 Brassica carinata HOM05D001498 ORTHO05D008559 5.7e-19 97.8 110 43.6
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 1.1e-17 93.6 58 67.2
BolC3t13891H Brassica oleracea HOM05D001498 ORTHO05D008559 1.1e-17 93.6 57 68.4
BolC1t01630H Brassica oleracea HOM05D001498 ORTHO05D008559 4.1e-17 91.7 57 66.7
C07p06240 Brassica napus HOM05D001498 ORTHO05D016111 9.1e-17 90.5 135 38.5
BcaC04g20542 Brassica carinata HOM05D002776 ORTHO05D012331 2.0e-16 89.4 88 45.5
BcaB02g11055 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-16 88.6 57 64.9
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-16 88.2 63 66.7
BolC9t55020H Brassica oleracea HOM05D000589 ORTHO05D001885 5.9e-16 87.8 66 63.6
BraA08t32605Z Brassica rapa HOM05D000589 ORTHO05D001885 5.9e-16 87.8 66 63.6
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 5.9e-16 87.8 66 63.6
A05p20230 Brassica napus HOM05D001498 ORTHO05D042518 1.3e-15 86.7 108 47.2
BolC6t37491H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-15 86.7 66 63.6
BraA05t20933Z Brassica rapa HOM05D001498 ORTHO05D042518 1.3e-15 86.7 108 47.2
BcaB02g10767 Brassica carinata HOM05D001498 ORTHO05D008559 1.7e-15 86.3 88 45.5
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 1.7e-15 86.3 66 62.1
C09p45500 Brassica napus HOM05D001498 ORTHO05D016111 8.5e-15 84.0 135 37.0
BcaNung05283 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-14 83.6 68 64.7
BcaB06g27859 Brassica carinata HOM05D001498 ORTHO05D008559 2.5e-14 82.4 64 62.5
BcaB01g01571 Brassica carinata HOM05D001498 ORTHO05D008559 4.2e-14 81.6 57 57.9
BcaC06g35066 Brassica carinata HOM05D001498 ORTHO05D008559 8.0e-13 77.4 78 46.2
BcaB05g22440 Brassica carinata HOM05D001498 ORTHO05D008559 5.2e-12 74.7 51 60.8
BcaC04g21442 Brassica carinata HOM05D001498 ORTHO05D008559 6.8e-12 74.3 57 57.9
BcaC04g20365 Brassica carinata HOM05D001498 ORTHO05D095589 2.6e-11 72.4 75 54.7
BcaC06g36327 Brassica carinata HOM05D001498 ORTHO05D008559 3.4e-11 72.0 64 48.4
BcaB06g26725 Brassica carinata HOM05D001498 ORTHO05D016036 1.7e-10 69.7 55 63.6
BcaB01g01815 Brassica carinata HOM05D001498 ORTHO05D016036 2.8e-10 68.9 55 63.6
BcaB04g17974 Brassica carinata HOM05D001498 ORTHO05D093757 1.4e-09 66.6 55 61.8
Sp7g11420 Schrenkiella parvula HOM05D001308 ORTHO05D001170 1.8e-09 66.2 112 34.8
BcaB05g22954 Brassica carinata HOM05D001498 ORTHO05D008559 2.4e-09 65.9 41 61.0
Sp4g09440 Schrenkiella parvula HOM05D001308 ORTHO05D001170 7.0e-09 64.3 112 33.9
BcaB02g10768 Brassica carinata HOM05D013880 ORTHO05D001170 2.7e-08 62.4 123 35.0
Carub.0006s2608 Capsella rubella HOM05D001308 ORTHO05D001170 4.5e-08 61.6 116 33.6
BcaB05g22111 Brassica carinata HOM05D001308 ORTHO05D001170 5.9e-08 61.2 124 27.4
BcaC08g43768 Brassica carinata HOM05D001498 ORTHO05D008559 5.9e-08 61.2 64 46.9
Carub.0001s3567 Capsella rubella HOM05D001308 ORTHO05D001170 7.7e-08 60.8 116 33.6
Carub.0002s0986 Capsella rubella HOM05D001308 ORTHO05D001170 7.7e-08 60.8 116 33.6
Carub.0003s3368 Capsella rubella HOM05D001308 ORTHO05D001170 7.7e-08 60.8 116 33.6
BolC7t41041H Brassica oleracea HOM05D001498 ORTHO05D008559 1.0e-07 60.5 51 49.0
BcaB01g03044 Brassica carinata HOM05D001308 ORTHO05D001170 1.3e-07 60.1 124 31.5
BolC5t32218H Brassica oleracea HOM05D001498 ORTHO05D008559 3.8e-07 58.5 33 72.7
BolC7t44374H Brassica oleracea HOM05D001498 ORTHO05D106148 3.8e-07 58.5 33 72.7
BcaB06g27009 Brassica carinata HOM05D001308 ORTHO05D001170 6.6e-07 57.8 88 36.4
BcaB02g10636 Brassica carinata HOM05D001308 ORTHO05D001170 8.6e-07 57.4 122 34.4
BcaC05g27665 Brassica carinata HOM05D001308 ORTHO05D001170 8.6e-07 57.4 122 30.3
BolC3t19181H Brassica oleracea HOM05D008414 ORTHO05D008559 8.6e-07 57.4 39 64.1
BcaC02g10530 Brassica carinata HOM05D001308 ORTHO05D001170 1.5e-06 56.6 122 30.3
BcaC08g45194 Brassica carinata HOM05D001308 ORTHO05D001170 1.5e-06 56.6 122 30.3
BcaB02g11429 Brassica carinata HOM05D001308 ORTHO05D001170 1.9e-06 56.2 109 29.4
BcaB04g17272 Brassica carinata HOM05D001308 ORTHO05D001170 4.2e-06 55.1 109 30.3
C05p36110 Brassica napus HOM05D001224 ORTHO05D003542 7.2e-06 54.3 96 32.3
C05p45400 Brassica napus HOM05D001224 ORTHO05D003542 7.2e-06 54.3 96 33.3
BcaC05g27678 Brassica carinata HOM05D001308 ORTHO05D001170 9.5e-06 53.9 109 29.4


User provided reference genes

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