Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 5.2e-45 184.1 99 100.0
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 9.2e-34 146.7 98 83.7
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 1.0e-32 143.3 98 81.6
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 2.9e-19 98.6 98 58.2
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-18 96.3 94 60.6
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 3.2e-18 95.1 98 56.1
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 1.2e-17 93.2 98 57.1
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 1.6e-17 92.8 98 57.1
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 2.7e-17 92.0 98 57.1
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 1.0e-16 90.1 98 54.1
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 1.3e-16 89.7 98 54.1
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 1.3e-16 89.7 100 57.0
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 3.9e-16 88.2 93 52.7
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 3.9e-16 88.2 100 56.0
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 5.0e-16 87.8 98 54.1
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 6.6e-16 87.4 86 54.7
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 8.6e-16 87.0 104 45.2
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 1.5e-15 86.3 104 45.2
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 1.5e-15 86.3 73 56.2
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 3.3e-15 85.1 104 45.2
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 9.5e-15 83.6 73 53.4
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 1.2e-14 83.2 89 56.2
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 1.6e-14 82.8 76 55.3
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 3.6e-14 81.6 89 50.6
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 6.2e-14 80.9 87 51.7
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 8.1e-14 80.5 68 55.9
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 1.1e-13 80.1 89 55.1
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-13 80.1 85 51.8
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 1.8e-13 79.3 85 51.8
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 1.8e-13 79.3 86 47.7
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 3.1e-13 78.6 81 58.0
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 5.2e-13 77.8 104 41.3
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 6.8e-13 77.4 76 52.6
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 8.9e-13 77.0 86 50.0
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 8.9e-13 77.0 104 42.3
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 8.9e-13 77.0 91 54.9
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 8.9e-13 77.0 94 48.9
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 1.2e-12 76.6 86 50.0
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 1.5e-12 76.3 92 47.8
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 1.5e-12 76.3 94 47.9
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 1.5e-12 76.3 94 47.9
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.5e-12 76.3 94 47.9
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 2.0e-12 75.9 104 46.2
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-12 75.9 94 47.9
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 2.0e-12 75.9 94 48.9
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 2.6e-12 75.5 73 49.3
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 2.6e-12 75.5 85 49.4
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 2.6e-12 75.5 85 50.6
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 2.6e-12 75.5 81 55.6
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 2.6e-12 75.5 104 43.3
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 4.4e-12 74.7 94 47.9
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 5.8e-12 74.3 92 48.9
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 5.8e-12 74.3 93 46.2
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 5.8e-12 74.3 73 52.1
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 7.5e-12 73.9 85 48.2
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 9.9e-12 73.6 92 46.7
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 1.3e-11 73.2 73 52.1
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 1.3e-11 73.2 86 47.7
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 1.7e-11 72.8 94 46.8
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 2.2e-11 72.4 94 47.9
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 2.2e-11 72.4 104 42.3
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 2.2e-11 72.4 88 47.7
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 2.9e-11 72.0 72 58.3
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 3.7e-11 71.6 86 45.3
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 3.7e-11 71.6 66 60.6
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 6.4e-11 70.9 77 48.1
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 6.4e-11 70.9 84 45.2
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 6.4e-11 70.9 92 45.7
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 6.4e-11 70.9 93 44.1
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 8.3e-11 70.5 87 47.1
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 8.3e-11 70.5 72 56.9
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-10 70.1 88 47.7
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-10 70.1 100 41.0
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 1.4e-10 69.7 106 42.5
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-10 69.7 103 41.7
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 1.9e-10 69.3 94 45.7
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-10 69.3 95 42.1
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 1.9e-10 69.3 88 45.5
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-10 69.3 93 43.0
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 2.4e-10 68.9 83 49.4
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 2.4e-10 68.9 80 46.2
BcaB06g26648 Brassica carinata HOM05D001498 ORTHO05D094209 4.1e-10 68.2 53 66.0
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 4.1e-10 68.2 93 43.0
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 5.4e-10 67.8 70 54.3
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 5.4e-10 67.8 64 53.1
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 5.4e-10 67.8 90 44.4
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 9.2e-10 67.0 88 44.3
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 1.2e-09 66.6 85 44.7
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.2e-09 66.6 85 45.9
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-09 66.6 85 47.1
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 1.6e-09 66.2 95 41.1
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 1.6e-09 66.2 88 44.3
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 2.1e-09 65.9 104 40.4
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 2.7e-09 65.5 85 45.9
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 2.7e-09 65.5 103 37.9
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 3.5e-09 65.1 64 50.0
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 4.6e-09 64.7 85 43.5
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 6.0e-09 64.3 67 56.7
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 1.3e-08 63.2 79 45.6
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 1.3e-08 63.2 45 64.4
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-08 63.2 81 43.2
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 1.3e-08 63.2 81 43.2
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 1.7e-08 62.8 85 45.9
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 3.0e-08 62.0 85 45.9
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 3.0e-08 62.0 93 39.8
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 3.0e-08 62.0 103 36.9
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 3.9e-08 61.6 89 43.8
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 5.1e-08 61.2 85 44.7
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 8.6e-08 60.5 77 46.8
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 1.9e-07 59.3 66 54.5
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 2.5e-07 58.9 85 43.5
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 5.6e-07 57.8 93 39.8
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 7.3e-07 57.4 66 53.0
BcaB07g33316 Brassica carinata HOM05D008414 ORTHO05D092176 4.7e-06 54.7 67 40.3
C07p13940 Brassica napus HOM05D001379 ORTHO05D001277 4.7e-06 54.7 68 48.5
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 8.1e-06 53.9 43 62.8
BcaB04g18489 Brassica carinata HOM05D008414 ORTHO05D092295 8.1e-06 53.9 65 40.0
C01p38770 Brassica napus HOM05D001379 ORTHO05D001277 8.1e-06 53.9 66 53.0
BolC4t23821H Brassica oleracea HOM05D008414 ORTHO05D014108 8.1e-06 53.9 65 41.5


User provided reference genes

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