Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22872 Brassica carinata HOM05D008387 ORTHO05D010446 8.0e-45 183.3 90 100.0
BcaC04g23696 Brassica carinata HOM05D008387 ORTHO05D010446 1.1e-28 129.8 84 75.0
C09p05610 Brassica napus HOM05D008387 ORTHO05D010446 1.1e-28 129.8 84 75.0
BcaB04g19657 Brassica carinata HOM05D008387 ORTHO05D010446 3.1e-28 128.3 84 75.0
A09p05180 Brassica napus HOM05D008387 ORTHO05D010446 4.0e-28 127.9 84 73.8
BraA09t36157Z Brassica rapa HOM05D008387 ORTHO05D010446 4.0e-28 127.9 84 73.8
BcaB01g01853 Brassica carinata HOM05D008387 ORTHO05D010446 6.8e-28 127.1 87 71.3
BolC9t53489H Brassica oleracea HOM05D008387 ORTHO05D010446 2.0e-27 125.6 83 74.7
Carub.0006s2529 Capsella rubella HOM05D008387 ORTHO05D010446 6.4e-26 120.6 84 66.7
Sp2g20470 Schrenkiella parvula HOM05D008387 ORTHO05D010446 2.4e-25 118.6 84 69.0
AT5G27220 Arabidopsis thaliana HOM05D008387 ORTHO05D010446 1.2e-24 116.3 84 67.9
AL6G39870 Arabidopsis lyrata HOM05D008387 ORTHO05D010446 1.3e-23 112.8 84 66.7
C07p40540 Brassica napus HOM05D008387 ORTHO05D010446 2.5e-22 108.6 84 60.7
BolC7t44591H Brassica oleracea HOM05D008387 ORTHO05D010446 2.5e-22 108.6 84 60.7
A06p37680 Brassica napus HOM05D008387 ORTHO05D010446 3.6e-21 104.8 81 59.3
BraA06t26688Z Brassica rapa HOM05D008387 ORTHO05D010446 3.6e-21 104.8 81 59.3
CARHR185830 Cardamine hirsuta HOM05D008387 ORTHO05D010446 9.9e-19 96.7 84 58.3
THA.LOC104818665 Tarenaya hassleriana HOM05D008387 ORTHO05D010446 4.6e-16 87.8 83 57.8
CARHR054200 Cardamine hirsuta HOM05D008387 ORTHO05D010446 1.4e-09 66.2 67 49.3
Thhalv10003597m.g Eutrema salsugineum HOM05D008387 ORTHO05D010446 2.1e-08 62.4 37 78.4
QL03p002724 Quercus lobata HOM05D000439 ORTHO05D002302 5.1e-07 57.8 87 36.8
CiPaw.07G011500 Carya illinoinensis HOM05D000439 ORTHO05D002302 6.6e-07 57.4 85 38.8
MD04G1214400 Malus domestica HOM05D000439 ORTHO05D002302 1.1e-06 56.6 84 35.7
RcHm_v2.0_Chr4g0411451 Rosa chinensis HOM05D000439 ORTHO05D002302 1.1e-06 56.6 83 34.9
FAN05G1628 Fragaria x ananassa HOM05D000439 ORTHO05D002302 1.9e-06 55.8 82 36.6
Gorai.013G116600 Gossypium raimondii HOM05D000439 ORTHO05D002302 7.3e-06 53.9 84 32.1
Lj7C482G14 Lonicera japonica HOM05D000439 ORTHO05D002302 7.3e-06 53.9 85 34.1
FAN14G4802 Fragaria x ananassa HOM05D000439 ORTHO05D002302 9.6e-06 53.5 83 34.9
QL03p002703 Quercus lobata HOM05D000439 ORTHO05D002302 9.6e-06 53.5 86 34.9


User provided reference genes

Program Settings