Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22796 Brassica carinata HOM05D006142 ORTHO05D010451 2.9e-69 265.0 124 100.0
C08p03660 Brassica napus HOM05D006142 ORTHO05D010451 2.5e-49 198.7 118 76.3
BolC3t20080H Brassica oleracea HOM05D000005 ORTHO05D000449 1.5e-41 172.9 124 64.5
C03p78180 Brassica napus HOM05D006142 ORTHO05D016090 2.0e-41 172.6 124 64.5
BcaB06g25861 Brassica carinata HOM05D006142 ORTHO05D023852 5.5e-36 154.5 123 56.1
BcaB01g01313 Brassica carinata HOM05D006142 ORTHO05D010451 1.6e-35 152.9 124 54.8
C05p60180 Brassica napus HOM05D006142 ORTHO05D010451 2.6e-30 135.6 110 52.7
BraA02t09249Z Brassica rapa HOM05D006142 ORTHO05D023852 1.1e-28 130.2 124 50.8
Sp7g08780 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.5e-28 129.8 115 51.3
Sp7g04550 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.9e-28 129.4 117 51.3
BolC4t22346H Brassica oleracea HOM05D006142 ORTHO05D023852 3.2e-28 128.6 124 51.6
A02p27060 Brassica napus HOM05D006142 ORTHO05D010451 4.2e-28 128.3 88 61.4
BraA02t07725Z Brassica rapa HOM05D006142 ORTHO05D010451 4.2e-28 128.3 88 61.4
BraA09t38560Z Brassica rapa HOM05D006142 ORTHO05D010451 9.4e-28 127.1 83 65.1
A06p29340 Brassica napus HOM05D006142 ORTHO05D010451 1.6e-27 126.3 99 53.5
BolC2t10216H Brassica oleracea HOM05D006142 ORTHO05D010451 2.7e-27 125.6 110 51.8
BraA07t29488Z Brassica rapa HOM05D006142 ORTHO05D010451 4.0e-26 121.7 116 48.3
BolC7t42721H Brassica oleracea HOM05D006142 ORTHO05D010451 5.7e-25 117.9 116 47.4
BcaC08g45575 Brassica carinata HOM05D006142 ORTHO05D023852 1.7e-24 116.3 96 58.3
Sp1g31670 Schrenkiella parvula HOM05D006142 ORTHO05D010451 8.2e-24 114.0 117 46.2
C04p19380 Brassica napus HOM05D006142 ORTHO05D024119 2.4e-23 112.5 110 48.2
BolC4t23470H Brassica oleracea HOM05D006142 ORTHO05D024119 2.4e-23 112.5 110 48.2
BcaC02g12101 Brassica carinata HOM05D006142 ORTHO05D010451 3.1e-23 112.1 106 49.1
Sp5g17600 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.1e-23 111.7 115 47.0
C04p22760 Brassica napus HOM05D006142 ORTHO05D027476 1.6e-22 109.8 119 46.2
Sp7g08100 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.6e-22 109.8 116 44.8
BcaB07g33111 Brassica carinata HOM05D006142 ORTHO05D010451 3.5e-22 108.6 111 47.7
BcaC01g01856 Brassica carinata HOM05D006142 ORTHO05D020039 5.9e-22 107.8 114 46.5
BcaC05g29081 Brassica carinata HOM05D006142 ORTHO05D010451 2.2e-21 105.9 111 47.7
A08p07910 Brassica napus HOM05D006142 ORTHO05D027476 2.2e-21 105.9 119 42.9
BcaB08g36277 Brassica carinata HOM05D006142 ORTHO05D010451 8.5e-21 104.0 106 44.3
BcaC05g26353 Brassica carinata HOM05D006142 ORTHO05D010451 1.6e-19 99.8 96 53.1
C01p40720 Brassica napus HOM05D006142 ORTHO05D010451 2.7e-19 99.0 83 50.6
Sp6g12110 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.5e-17 93.2 115 39.1
C06p09180 Brassica napus HOM05D006142 ORTHO05D010451 3.4e-17 92.0 82 54.9
C04p39390 Brassica napus HOM05D006142 ORTHO05D010451 9.8e-17 90.5 89 48.3
BcaNung03606 Brassica carinata HOM05D006142 ORTHO05D024119 1.3e-16 90.1 83 49.4
Carub.0002s1003 Capsella rubella HOM05D006142 ORTHO05D010451 2.8e-16 89.0 114 38.6
Sp3g28050 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.7e-16 88.6 94 46.8
BolC4t25939H Brassica oleracea HOM05D006142 ORTHO05D023852 1.1e-15 87.0 60 63.3
BraA02t07853Z Brassica rapa HOM05D006142 ORTHO05D020039 1.1e-15 87.0 86 46.5
Sp2g07140 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.1e-15 87.0 83 50.6
Sp3g26800 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.4e-15 86.7 89 48.3
BraA09t37555Z Brassica rapa HOM05D006142 ORTHO05D028221 1.8e-15 86.3 85 45.9
A01p22910 Brassica napus HOM05D006142 ORTHO05D020039 3.1e-15 85.5 86 45.3
BraA01t02204Z Brassica rapa HOM05D006142 ORTHO05D020039 3.1e-15 85.5 86 45.3
Sp7g09160 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.1e-15 85.1 88 48.9
Sp2g07350 Schrenkiella parvula HOM05D006142 ORTHO05D010451 7.0e-15 84.3 88 53.4
Sp2g05510 Schrenkiella parvula HOM05D006142 ORTHO05D010451 3.5e-14 82.0 71 47.9
C03p71310 Brassica napus HOM05D006142 ORTHO05D010451 1.7e-13 79.7 86 46.5
BcaB08g35137 Brassica carinata HOM05D006142 ORTHO05D010451 2.9e-13 79.0 74 48.6
C01p31590 Brassica napus HOM05D013216 ORTHO05D015524 1.1e-12 77.0 49 75.5
C07p32990 Brassica napus HOM05D013216 ORTHO05D015524 1.1e-12 77.0 49 75.5
BolC7t41641H Brassica oleracea HOM05D013216 ORTHO05D015524 1.1e-12 77.0 49 75.5
Sp2g08200 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.1e-12 77.0 86 45.3
Sp5g17870 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.1e-12 77.0 115 38.3
BolC8t47201H Brassica oleracea HOM05D006142 ORTHO05D010451 1.5e-12 76.6 82 45.1
SpUn0094_0020 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.5e-12 75.9 80 47.5
C07p23800 Brassica napus HOM05D013216 ORTHO05D015524 3.2e-12 75.5 49 73.5
BraA08t32811Z Brassica rapa HOM05D006142 ORTHO05D027476 3.2e-12 75.5 82 45.1
Sp1g33280 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.1e-11 72.8 73 47.9
A07p36220 Brassica napus HOM05D006142 ORTHO05D010451 3.6e-11 72.0 82 46.3
A08p11630 Brassica napus HOM05D006142 ORTHO05D010451 3.6e-11 72.0 82 45.1
BolC8t48132H Brassica oleracea HOM05D006142 ORTHO05D020039 4.7e-11 71.6 84 41.7
BcaB01g04266 Brassica carinata HOM05D006142 ORTHO05D010451 6.1e-11 71.2 65 44.6
Sp2g07090 Schrenkiella parvula HOM05D006142 ORTHO05D010451 1.0e-10 70.5 91 36.3
BraA04t16729Z Brassica rapa HOM05D013216 ORTHO05D015524 3.0e-10 68.9 43 76.7
BcaC02g09206 Brassica carinata HOM05D006142 ORTHO05D031894 5.2e-10 68.2 98 38.8
BcaC09g49266 Brassica carinata HOM05D006142 ORTHO05D010451 5.2e-10 68.2 56 46.4
Sp4g08110 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.0e-09 66.2 90 43.3
C09p61280 Brassica napus HOM05D006142 ORTHO05D010451 2.6e-09 65.9 51 49.0
Sp3g24640 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.6e-09 65.9 89 40.4
Sp6g35200 Schrenkiella parvula HOM05D006142 ORTHO05D010451 2.6e-09 65.9 91 42.9
Sp7g09080 Schrenkiella parvula HOM05D006142 ORTHO05D371143 5.7e-09 64.7 54 53.7
BcaC05g29818 Brassica carinata HOM05D006142 ORTHO05D010451 6.3e-08 61.2 73 42.5
Sp3g25980 Schrenkiella parvula HOM05D006142 ORTHO05D010451 6.3e-08 61.2 53 52.8
C01p45320 Brassica napus HOM05D007818 ORTHO05D011878 4.1e-07 58.5 102 30.4
C07p04730 Brassica napus HOM05D006142 ORTHO05D020039 4.1e-07 58.5 64 40.6
BcaC04g20446 Brassica carinata HOM05D008389 ORTHO05D010630 5.4e-07 58.2 108 29.6
BraA03t15276Z Brassica rapa HOM05D007818 ORTHO05D011878 7.0e-07 57.8 102 30.4
Carub.0004s0673 Capsella rubella HOM05D006142 ORTHO05D114419 9.2e-07 57.4 110 28.2
A01p25450 Brassica napus HOM05D007818 ORTHO05D015522 1.2e-06 57.0 102 29.4
A07p05920 Brassica napus HOM05D007818 ORTHO05D015522 1.6e-06 56.6 102 29.4
C07p11950 Brassica napus HOM05D007818 ORTHO05D015522 1.6e-06 56.6 102 29.4
BolC9t55740H Brassica oleracea HOM05D008389 ORTHO05D018586 1.6e-06 56.6 104 31.7
C01p41510 Brassica napus HOM05D007818 ORTHO05D015522 2.0e-06 56.2 102 29.4
BraA01t02469Z Brassica rapa HOM05D007818 ORTHO05D015522 2.0e-06 56.2 102 29.4
BcaC04g19940 Brassica carinata HOM05D006142 ORTHO05D010451 2.7e-06 55.8 59 49.2
C04p35200 Brassica napus HOM05D007818 ORTHO05D015522 2.7e-06 55.8 102 29.4
BolC1t04008H Brassica oleracea HOM05D008389 ORTHO05D010630 2.7e-06 55.8 99 29.3
BolC4t24822H Brassica oleracea HOM05D008389 ORTHO05D018586 2.7e-06 55.8 113 31.0
BcaC05g28389 Brassica carinata HOM05D006142 ORTHO05D010451 3.5e-06 55.5 63 46.0
A03p39270 Brassica napus HOM05D009010 ORTHO05D020226 3.5e-06 55.5 119 25.2
C05p16070 Brassica napus HOM05D006142 ORTHO05D010451 3.5e-06 55.5 71 40.8
C05p36060 Brassica napus HOM05D007818 ORTHO05D015522 3.5e-06 55.5 102 29.4
BraA01t01576Z Brassica rapa HOM05D007818 ORTHO05D015522 3.5e-06 55.5 102 29.4
BcaC02g11474 Brassica carinata HOM05D010688 ORTHO05D010630 4.5e-06 55.1 103 29.1
BolC3t19876H Brassica oleracea HOM05D008389 ORTHO05D010630 4.5e-06 55.1 104 29.8
BolC5t32989H Brassica oleracea HOM05D007818 ORTHO05D011878 4.5e-06 55.1 102 29.4
C09p16600 Brassica napus HOM05D001498 ORTHO05D011448 5.9e-06 54.7 105 26.7


User provided reference genes

Program Settings