Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22788 Brassica carinata HOM05D000961 ORTHO05D000841 9.8e-68 260.0 131 100.0
BcaB05g22782 Brassica carinata HOM05D000961 ORTHO05D000841 1.5e-63 246.1 136 93.4
BcaC03g13825 Brassica carinata HOM05D000961 ORTHO05D000841 2.5e-63 245.4 136 93.4
BolC2t07093H Brassica oleracea HOM05D000961 ORTHO05D000841 2.5e-63 245.4 136 93.4
C02p10600 Brassica napus HOM05D000961 ORTHO05D000841 4.3e-63 244.6 136 92.6
BraA02t05612Z Brassica rapa HOM05D000961 ORTHO05D000841 4.3e-63 244.6 136 92.6
Sp6g23440 Schrenkiella parvula HOM05D000961 ORTHO05D000841 1.9e-50 202.6 136 82.4
Carub.0006s1938 Capsella rubella HOM05D000961 ORTHO05D000841 5.1e-48 194.5 135 81.5
AL6G32640 Arabidopsis lyrata HOM05D000961 ORTHO05D000841 4.3e-47 191.4 134 78.4
CARHR191790 Cardamine hirsuta HOM05D000961 ORTHO05D000841 9.6e-47 190.3 135 76.3
Thhalv10012553m.g Eutrema salsugineum HOM05D000961 ORTHO05D000841 1.4e-45 186.4 134 79.1
AT5G21080 Arabidopsis thaliana HOM05D000961 ORTHO05D000841 5.2e-45 184.5 135 77.0
BcaC01g06625 Brassica carinata HOM05D000961 ORTHO05D000841 1.1e-39 166.8 136 72.1
BolC3t13667H Brassica oleracea HOM05D000961 ORTHO05D000841 1.1e-39 166.8 136 72.1
Aa31LG1G13690 Aethionema arabicum HOM05D000961 ORTHO05D000841 1.2e-33 146.7 139 61.9
C03p11970 Brassica napus HOM05D000961 ORTHO05D000841 3.5e-33 145.2 136 66.9
THA.LOC104801976 Tarenaya hassleriana HOM05D000961 ORTHO05D000841 2.1e-17 92.8 128 46.1
Cpa.g.sc125.18 Carica papaya HOM05D000961 ORTHO05D000841 8.7e-16 87.4 116 53.4
Gohir.D12G096900 Gossypium hirsutum HOM05D000961 ORTHO05D000841 2.0e-12 76.3 122 46.7
Gorai.008G105100 Gossypium raimondii HOM05D000961 ORTHO05D000841 2.0e-12 76.3 122 46.7
Duzib138G1203 Durio zibethinus HOM05D000961 ORTHO05D000841 2.9e-11 72.4 84 52.4
Gohir.A12G093900 Gossypium hirsutum HOM05D000961 ORTHO05D000841 2.9e-11 72.4 123 46.3
Hund24712 Selenicereus undatus HOM05D000961 ORTHO05D000841 5.0e-11 71.6 101 42.6
QL04p008116 Quercus lobata HOM05D000961 ORTHO05D000841 3.2e-10 68.9 117 41.0
QL04p008531 Quercus lobata HOM05D000961 ORTHO05D000841 3.2e-10 68.9 117 41.0
Duzib133G0718 Durio zibethinus HOM05D000961 ORTHO05D000841 4.2e-10 68.6 84 52.4
Duzib268G0971 Durio zibethinus HOM05D000961 ORTHO05D000841 5.5e-10 68.2 84 52.4
TWI73G0141 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 1.2e-09 67.0 136 41.9
TAR623G1550 Trochodendron aralioides HOM05D000961 ORTHO05D000841 3.5e-09 65.5 119 41.2
Ah.04g151700 Amaranthus hybridus HOM05D000961 ORTHO05D000841 6.1e-09 64.7 107 42.1
Sc13g0001800 Simmondsia chinensis HOM05D000961 ORTHO05D000841 1.0e-08 63.9 114 42.1
RcHm_v2.0_Chr3g0481871 Rosa chinensis HOM05D000961 ORTHO05D000841 1.3e-08 63.5 89 42.7
HPP92_010413 Vanilla planifolia HOM05D000961 ORTHO05D000841 1.3e-08 63.5 110 42.7
Rhsim03G0019100 Rhododendron simsii HOM05D000961 ORTHO05D000841 1.8e-08 63.2 129 38.8
COL.COLO4_04869 Corchorus olitorius HOM05D000961 ORTHO05D000841 2.3e-08 62.8 120 43.3
Dinv09340 Davidia involucrata HOM05D000961 ORTHO05D000841 3.0e-08 62.4 121 39.7
Glyma.12G008200 Glycine max HOM05D000961 ORTHO05D000841 3.0e-08 62.4 145 39.3
FAN06G4592 Fragaria x ananassa HOM05D000961 ORTHO05D000841 3.9e-08 62.0 125 36.8
GSVIVG01032134001 Vitis vinifera HOM05D000961 ORTHO05D000841 3.9e-08 62.0 114 43.9
MBI02_g23148_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 5.1e-08 61.6 117 36.8
Prupe.2G016800 Prunus persica HOM05D000961 ORTHO05D000841 5.1e-08 61.6 141 36.9
Atru.chr11.2603 Acer truncatum HOM05D000961 ORTHO05D000841 6.7e-08 61.2 120 40.8
MD14G1070800 Malus domestica HOM05D000961 ORTHO05D000841 6.7e-08 61.2 116 37.9
Actinidia28317 Actinidia chinensis HOM05D000961 ORTHO05D000841 8.7e-08 60.8 97 39.2
FvH4_7g01250 Fragaria vesca HOM05D000961 ORTHO05D000841 1.1e-07 60.5 125 36.0
Hund05281 Selenicereus undatus HOM05D000961 ORTHO05D000841 1.1e-07 60.5 111 36.0
CSS0016299 Camellia sinensis var. sinensis HOM05D000961 ORTHO05D000841 1.5e-07 60.1 119 37.0
Dinv43427 Davidia involucrata HOM05D000961 ORTHO05D000841 1.5e-07 60.1 106 41.5
FAN03G2397 Fragaria x ananassa HOM05D000961 ORTHO05D000841 1.5e-07 60.1 125 36.8
Medtr4g039320 Medicago truncatula HOM05D000961 ORTHO05D000841 1.5e-07 60.1 128 39.1
GSVIVG01033301001 Vitis vinifera HOM05D000961 ORTHO05D000841 1.5e-07 60.1 107 38.3
QL07p000130 Quercus lobata HOM05D000961 ORTHO05D000841 1.9e-07 59.7 91 46.2
Aqoxy2G00162 Aquilegia oxysepala HOM05D000961 ORTHO05D000841 2.5e-07 59.3 127 37.8
EL10Ac3g07077 Beta vulgaris HOM05D000961 ORTHO05D000841 2.5e-07 59.3 71 47.9
Migut.K00084 Erythranthe guttata HOM05D000961 ORTHO05D000841 2.5e-07 59.3 52 55.8
Glyma.09G228300 Glycine max HOM05D000961 ORTHO05D000841 2.5e-07 59.3 142 35.9
MD02G1309100 Malus domestica HOM05D000961 ORTHO05D000841 2.5e-07 59.3 118 39.0
Manes.10G140400 Manihot esculenta HOM05D000961 ORTHO05D000841 2.5e-07 59.3 119 35.3
PSO384G1411 Papaver somniferum HOM05D000961 ORTHO05D000841 2.5e-07 59.3 120 35.0
Nn2g15283 Nelumbo nucifera HOM05D000961 ORTHO05D000841 3.3e-07 58.9 153 34.0
PSO339G0759 Papaver somniferum HOM05D000961 ORTHO05D000841 3.3e-07 58.9 120 35.8
PSO339G5066 Papaver somniferum HOM05D000961 ORTHO05D000841 3.3e-07 58.9 133 35.3
Prupe.7G063500 Prunus persica HOM05D000961 ORTHO05D000841 3.3e-07 58.9 112 37.5
MSTRG.10819 Avicennia marina HOM05D000961 ORTHO05D000841 4.3e-07 58.5 92 42.4
Migut.J01764 Erythranthe guttata HOM05D000961 ORTHO05D000841 4.3e-07 58.5 91 41.8
FAN01G0196 Fragaria x ananassa HOM05D000961 ORTHO05D000841 4.3e-07 58.5 125 36.8
MD12G1077200 Malus domestica HOM05D000961 ORTHO05D000841 4.3e-07 58.5 92 41.3
RcHm_v2.0_Chr1g0317001 Rosa chinensis HOM05D000961 ORTHO05D000841 4.3e-07 58.5 125 40.0
Actinidia31072 Actinidia chinensis HOM05D000961 ORTHO05D000841 5.7e-07 58.2 132 37.1
FAN14G5264 Fragaria x ananassa HOM05D000961 ORTHO05D000841 5.7e-07 58.2 89 40.4
Ah.13g076420 Amaranthus hybridus HOM05D000961 ORTHO05D000841 7.4e-07 57.8 111 36.9
FvH4_6g23620 Fragaria vesca HOM05D000961 ORTHO05D000841 7.4e-07 57.8 89 40.4
Atru.chr1.1077 Acer truncatum HOM05D000961 ORTHO05D000841 9.7e-07 57.4 143 35.7
arahy.Tifrunner.gnm1.ann1.BWWN3T Arachis hypogaea HOM05D000961 ORTHO05D000841 9.7e-07 57.4 120 36.7
Cfa016828 Carpinus fangiana HOM05D000961 ORTHO05D000841 9.7e-07 57.4 122 36.9
AUR62024436 Chenopodium quinoa HOM05D000961 ORTHO05D000841 9.7e-07 57.4 111 37.8
Thecc.05G157800 Theobroma cacao HOM05D000961 ORTHO05D000841 9.7e-07 57.4 113 38.9
CANSAT80G0959 Cannabis sativa HOM05D000961 ORTHO05D000841 1.3e-06 57.0 105 41.0
CiPaw.10G032800 Carya illinoinensis HOM05D000961 ORTHO05D000841 1.3e-06 57.0 115 39.1
Phvul.011G013000 Phaseolus vulgaris HOM05D000961 ORTHO05D000841 1.3e-06 57.0 142 36.6
HPP92_019916 Vanilla planifolia HOM05D000961 ORTHO05D000841 1.3e-06 57.0 66 50.0
vmacro22358 Vaccinium macrocarpon HOM05D000961 ORTHO05D000841 1.6e-06 56.6 92 38.0
VMungo1127G0627 Vigna mungo HOM05D005145 ORTHO05D006062 1.6e-06 56.6 113 40.7
arahy.Tifrunner.gnm1.ann1.A6PFHD Arachis hypogaea HOM05D000961 ORTHO05D000841 2.2e-06 56.2 120 34.2
Nn7g36249 Nelumbo nucifera HOM05D000961 ORTHO05D000841 2.2e-06 56.2 100 40.0
HPP92_028663 Vanilla planifolia HOM05D000961 ORTHO05D000841 2.2e-06 56.2 100 38.0
FAN05G2063 Fragaria x ananassa HOM05D000961 ORTHO05D000841 2.8e-06 55.8 89 41.6
FAN09G2240 Fragaria x ananassa HOM05D000961 ORTHO05D000841 2.8e-06 55.8 89 41.6
SGA_v2.0_scaffold94G28478 Striga asiatica HOM05D000961 ORTHO05D000841 2.8e-06 55.8 129 33.3
PGR004G1646 Punica granatum HOM05D000961 ORTHO05D000841 3.7e-06 55.5 66 47.0
TWI53G1548 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 3.7e-06 55.5 117 39.3
TWI77G0571 Tripterygium wilfordii HOM05D000961 ORTHO05D000841 3.7e-06 55.5 122 36.9
CANSAT80G2818 Cannabis sativa HOM05D000961 ORTHO05D000841 4.8e-06 55.1 62 53.2
AUR62026028 Chenopodium quinoa HOM05D000961 ORTHO05D000841 4.8e-06 55.1 111 36.9
COL.COLO4_28239 Corchorus olitorius HOM05D000961 ORTHO05D000841 4.8e-06 55.1 93 43.0
FAN02G2755 Fragaria x ananassa HOM05D000961 ORTHO05D000841 4.8e-06 55.1 89 41.6
HPP92_028612 Vanilla planifolia HOM05D000961 ORTHO05D000841 6.3e-06 54.7 91 40.7
CSS0037898 Camellia sinensis var. sinensis HOM05D000961 ORTHO05D000841 8.2e-06 54.3 110 40.9
Ciclev10033334m.g Citrus clementina HOM05D000961 ORTHO05D000841 8.2e-06 54.3 102 41.2
Lju124C39G2 Lonicera japonica HOM05D000961 ORTHO05D000841 8.2e-06 54.3 52 50.0


User provided reference genes

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