Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 1.7e-249 865.5 431 100.0
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 5.4e-232 807.4 428 94.2
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 3.5e-231 804.7 429 93.9
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 2.3e-230 802.0 426 94.4
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 1.9e-229 798.9 426 94.1
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 8.4e-225 783.5 441 89.3
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 9.0e-219 763.5 436 88.1
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 1.2e-218 763.1 438 86.3
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 4.2e-216 754.6 439 85.9
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 9.3e-216 753.4 440 85.2
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 2.1e-207 725.7 435 82.3
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 1.3e-206 723.0 453 81.0
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 7.4e-205 717.2 405 89.9
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 9.7e-205 716.8 417 88.2
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 1.2e-199 699.9 440 80.5
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 7.4e-181 637.5 423 73.8
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 8.2e-180 634.0 434 71.2
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 2.4e-179 632.5 435 72.4
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 2.4e-179 632.5 435 72.4
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 9.1e-179 630.6 427 72.8
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 1.6e-178 629.8 426 71.6
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 2.0e-178 629.4 427 72.4
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 3.5e-178 628.6 417 72.9
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 1.0e-177 627.1 432 71.3
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 1.0e-177 627.1 434 71.4
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 1.3e-177 626.7 433 72.5
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 2.9e-177 625.5 430 71.4
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 3.8e-177 625.2 417 74.3
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.9e-176 622.9 427 71.2
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.9e-176 622.9 437 70.5
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.2e-176 621.7 435 71.5
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 7.2e-176 620.9 423 71.2
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 4.7e-175 618.2 437 68.2
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 1.8e-174 616.3 426 69.7
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 2.0e-173 612.8 431 69.6
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 3.3e-173 612.1 466 67.4
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 3.3e-173 612.1 432 69.4
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 3.3e-173 612.1 434 68.7
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 9.7e-173 610.5 430 68.6
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 1.3e-172 610.1 432 70.4
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 1.7e-172 609.8 417 68.8
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 1.7e-172 609.8 433 68.1
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 2.2e-172 609.4 431 68.9
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 2.8e-172 609.0 429 68.3
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 1.4e-171 606.7 433 68.8
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 1.8e-171 606.3 420 71.0
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 2.4e-171 605.9 444 66.9
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 7.0e-171 604.4 420 70.2
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 3.5e-170 602.1 434 67.5
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 3.5e-170 602.1 436 67.9
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 3.5e-170 602.1 459 66.0
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 3.8e-169 598.6 417 70.7
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 6.5e-169 597.8 444 66.0
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 2.5e-168 595.9 418 68.7
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 2.5e-168 595.9 437 67.0
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 7.2e-168 594.3 433 67.4
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 9.4e-168 594.0 430 68.1
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.2e-167 593.6 434 66.8
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 1.2e-167 593.6 417 67.6
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 1.6e-167 593.2 433 66.5
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 1.6e-167 593.2 434 67.5
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 1.6e-167 593.2 434 67.1
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 2.7e-167 592.4 434 67.5
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 6.1e-167 591.3 433 66.3
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 8.0e-167 590.9 430 66.5
Glyma.08G159600 Glycine max HOM05D004598 ORTHO05D005550 8.0e-167 590.9 431 67.1
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 2.3e-166 589.3 433 65.8
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 4.0e-166 588.6 433 65.8
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 5.2e-166 588.2 419 69.5
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 1.2e-165 587.0 436 66.5
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 1.2e-165 587.0 429 68.3
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 2.0e-165 586.3 435 66.2
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 7.5e-165 584.3 434 67.3
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 1.8e-163 579.7 401 71.3
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 7.0e-163 577.8 433 65.6
Rhsim11G0148800 Rhododendron simsii HOM05D004598 ORTHO05D005550 3.5e-162 575.5 432 67.6
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 1.3e-161 573.5 462 63.0
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.9e-160 569.7 499 59.5
Ciclev10001079m.g Citrus clementina HOM05D004598 ORTHO05D005550 3.3e-160 568.9 431 66.6
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 3.6e-159 565.5 394 69.5
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 5.2e-158 561.6 445 63.8
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 1.2e-157 560.5 413 69.2
Dinv08542 Davidia involucrata HOM05D004598 ORTHO05D005550 4.3e-152 542.0 409 68.2
Aqoxy3G00619 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.4e-150 537.0 434 62.2
QL11p052661 Quercus lobata HOM05D004598 ORTHO05D005550 1.2e-149 533.9 450 61.1
Medtr1g058230 Medicago truncatula HOM05D004598 ORTHO05D005550 5.8e-149 531.6 424 63.7
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 2.0e-146 523.1 281 93.6
AUR62026384 Chenopodium quinoa HOM05D004598 ORTHO05D005550 7.8e-146 521.2 374 66.0
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 9.5e-144 514.2 426 62.0
HPP92_002259 Vanilla planifolia HOM05D004598 ORTHO05D005550 1.2e-138 497.3 390 61.0
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 1.5e-136 490.3 328 74.7
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 2.8e-135 486.1 369 63.7
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 2.3e-134 483.0 409 60.6
Hma1.2p1_0315F.1_g122690 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 5.2e-134 481.9 336 72.9
EL10Ac6g13343 Beta vulgaris HOM05D004598 ORTHO05D005550 4.4e-133 478.8 430 58.1
arahy.Tifrunner.gnm1.ann1.B5R5MF Arachis hypogaea HOM05D004598 ORTHO05D005550 1.1e-131 474.2 330 70.6
arahy.Tifrunner.gnm1.ann1.K5F1ZR Arachis hypogaea HOM05D004598 ORTHO05D005550 1.1e-131 474.2 328 71.3
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 4.1e-131 472.2 416 55.3
AagrBONN_evm.TU.Sc2ySwM_368.2499 Anthoceros agrestis HOM05D004598 ORTHO05D005550 6.6e-129 464.9 409 58.4
Sed0007699 Sechium edule HOM05D004598 ORTHO05D005550 2.4e-126 456.4 340 67.4
Pp3c1_29840 Physcomitrium patens HOM05D004598 ORTHO05D005550 4.0e-126 455.7 411 55.0
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 6.8e-126 454.9 418 56.9
arahy.Tifrunner.gnm1.ann1.PEW2A9 Arachis hypogaea HOM05D004598 ORTHO05D005550 2.6e-125 453.0 337 67.7
Os03g0670200 Oryza sativa ssp. japonica HOM05D004598 ORTHO05D005550 1.3e-124 450.7 432 53.7
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 1.3e-124 450.7 320 66.9
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 1.7e-124 450.3 352 63.4
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 1.3e-121 440.7 443 54.6
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 2.4e-118 429.9 398 54.8
DCAR_027631 Daucus carota HOM05D004598 ORTHO05D005550 2.6e-109 399.8 312 65.7
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 1.3e-108 397.5 334 61.4
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.7e-108 397.1 418 52.2
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 1.6e-106 390.6 235 83.4
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 4.5e-101 372.5 577 37.8
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 3.0e-97 359.8 280 62.9
arahy.Tifrunner.gnm1.ann1.BN9D0T Arachis hypogaea HOM05D004598 ORTHO05D005550 6.9e-94 348.6 361 54.8
Gohir.A11G320400 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.1e-91 341.3 370 51.4
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.8e-87 325.9 252 65.1
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 4.1e-86 322.8 280 59.6
unitig_736.g22586 Utricularia gibba HOM05D004598 ORTHO05D005550 1.9e-83 313.9 270 57.8
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 7.2e-83 312.0 410 43.4
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 2.1e-82 310.5 340 52.4
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 2.2e-79 300.4 414 43.2
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 2.8e-79 300.1 423 41.4
ECA240G3480 Erigeron canadensis HOM05D004598 ORTHO05D005550 8.2e-79 298.5 196 71.4
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 1.0e-76 291.6 397 44.1
BolC9t58552H Brassica oleracea HOM05D004598 ORTHO05D005550 6.5e-76 288.9 251 67.7
BNapus_Darmor_BZH_scaffold_38p00840 Brassica napus HOM05D004598 ORTHO05D005550 3.2e-75 286.6 150 92.0
MD10G1130600 Malus domestica HOM05D004598 ORTHO05D005550 1.9e-67 260.8 229 56.3
Cre14.g616200 Chlamydomonas reinhardtii HOM05D004598 ORTHO05D005550 3.9e-65 253.1 459 35.3
CSS0012948 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 5.2e-65 252.7 156 77.6
Zm00001eb096280 Zea mays HOM05D004598 ORTHO05D005550 8.8e-65 251.9 216 59.7
Nn2g12459 Nelumbo nucifera HOM05D004598 ORTHO05D005550 1.2e-61 241.5 149 78.5
Rhsim11G0028900 Rhododendron simsii HOM05D004598 ORTHO05D005550 3.5e-61 240.0 349 41.8
Cfa027243 Carpinus fangiana HOM05D004598 ORTHO05D005550 2.2e-60 237.3 403 37.7
Psat6g012400 Pisum sativum HOM05D004598 ORTHO05D005550 1.1e-59 235.0 148 76.4
MCO01G023 Micromonas commoda HOM05D004598 ORTHO05D005550 1.2e-58 231.5 415 37.3
FAN24G1674 Fragaria x ananassa HOM05D004598 ORTHO05D005550 8.3e-55 218.8 147 71.4
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 9.4e-51 205.3 136 70.6
TAR160G0002 Trochodendron aralioides HOM05D004598 ORTHO05D005550 9.4e-51 205.3 182 57.7
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 2.7e-50 203.8 145 69.7
Dinv26897 Davidia involucrata HOM05D004598 ORTHO05D005550 5.0e-44 183.0 115 76.5
Lj2E933T1 Lonicera japonica HOM05D004598 ORTHO05D005550 1.2e-42 178.3 110 76.4
BcaB01g04740 Brassica carinata HOM05D004598 ORTHO05D005550 1.4e-38 164.9 124 75.8
vmacro20475 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 4.6e-29 133.3 84 73.8
vmacro22736 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 4.6e-29 133.3 84 73.8
PRCOL_00005536 Prasinoderma coloniale HOM05D004598 ORTHO05D005550 6.0e-29 132.9 414 28.0
MELO3C010621.2 Cucumis melo HOM05D004598 ORTHO05D005550 1.4e-25 121.7 93 62.4
Rhsim09G0084000 Rhododendron simsii HOM05D004598 ORTHO05D005550 5.4e-22 109.8 72 72.2
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 1.5e-16 91.7 336 27.1
SHI44717 Sapria himalayana HOM05D004598 ORTHO05D005550 2.4e-14 84.3 103 46.6
CAN.G890.17 Capsicum annuum HOM05D004598 ORTHO05D005550 2.5e-11 74.3 48 70.8
SHI39035 Sapria himalayana HOM05D004598 ORTHO05D005550 8.9e-09 65.9 53 58.5
SHI47796 Sapria himalayana HOM05D004598 ORTHO05D005550 2.0e-08 64.7 54 53.7
SHI53813 Sapria himalayana HOM05D004598 ORTHO05D005550 2.0e-08 64.7 52 55.8
SHI39037 Sapria himalayana HOM05D004598 ORTHO05D005550 2.6e-08 64.3 52 55.8
SHI53927 Sapria himalayana HOM05D004598 ORTHO05D005550 2.6e-08 64.3 52 55.8
Medtr6g051670 Medicago truncatula HOM05D004598 ORTHO05D005550 1.7e-07 61.6 43 55.8
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 4.2e-06 57.0 163 29.4


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