Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22721 Brassica carinata HOM05D014685 ORTHO05D011865 4.4e-64 247.7 115 100.0
C03p25280 Brassica napus HOM05D014685 ORTHO05D011865 5.5e-30 134.4 114 60.5
BolC3t14922H Brassica oleracea HOM05D014685 ORTHO05D011865 5.5e-30 134.4 114 60.5
BraA03t11376Z Brassica rapa HOM05D014685 ORTHO05D011865 1.2e-29 133.3 114 61.4
C06p00010 Brassica napus HOM05D014685 ORTHO05D011865 2.7e-29 132.1 113 62.8
A03p21410 Brassica napus HOM05D014187 ORTHO05D011865 3.9e-20 101.7 74 66.2
BcaNung06046 Brassica carinata HOM05D014685 ORTHO05D011865 2.8e-18 95.5 63 74.6
BcaC08g42791 Brassica carinata HOM05D014685 ORTHO05D011865 2.4e-17 92.4 63 73.0
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 4.5e-08 61.6 93 34.4
AL8G40910 Arabidopsis lyrata HOM05D001456 ORTHO05D013730 5.9e-08 61.2 78 37.2
AL7G38920 Arabidopsis lyrata HOM05D014685 ORTHO05D079089 1.0e-07 60.5 64 45.3
BcaC06g33174 Brassica carinata HOM05D001456 ORTHO05D014991 1.3e-07 60.1 76 35.5
C07p44880 Brassica napus HOM05D001456 ORTHO05D014991 1.3e-07 60.1 76 38.2
C06p00110 Brassica napus HOM05D014685 ORTHO05D011865 1.7e-07 59.7 44 70.5
C07p44870 Brassica napus HOM05D001456 ORTHO05D014991 1.7e-07 59.7 76 38.2
BcaC06g33215 Brassica carinata HOM05D001456 ORTHO05D014991 2.2e-07 59.3 76 38.2
BolC7t45011H Brassica oleracea HOM05D001456 ORTHO05D014991 2.2e-07 59.3 76 38.2
A03p46820 Brassica napus HOM05D001456 ORTHO05D014991 2.9e-07 58.9 76 36.8
A03p46830 Brassica napus HOM05D001456 ORTHO05D014991 3.8e-07 58.5 76 36.8
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 3.8e-07 58.5 93 33.3
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 3.8e-07 58.5 49 53.1
Thhalv10006280m.g Eutrema salsugineum HOM05D014685 ORTHO05D011865 3.8e-07 58.5 79 39.2
AL8G41190 Arabidopsis lyrata HOM05D001456 ORTHO05D013730 6.5e-07 57.8 88 34.1
A09p52600 Brassica napus HOM05D016731 ORTHO05D011781 1.4e-06 56.6 48 52.1
AL8G41820 Arabidopsis lyrata HOM05D001456 ORTHO05D013730 1.9e-06 56.2 93 34.4
A09p52590 Brassica napus HOM05D001456 ORTHO05D011781 1.9e-06 56.2 73 39.7
C08p35340 Brassica napus HOM05D001456 ORTHO05D011781 1.9e-06 56.2 73 39.7
BolC8t51127H Brassica oleracea HOM05D001456 ORTHO05D011781 1.9e-06 56.2 73 39.7
Thhalv10027969m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 1.9e-06 56.2 48 47.9
GSVIVG01031320001 Vitis vinifera HOM05D001456 ORTHO05D002799 3.2e-06 55.5 75 36.0
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 4.2e-06 55.1 45 53.3
BraA04t16134Z Brassica rapa HOM05D010965 ORTHO05D024278 4.2e-06 55.1 45 53.3
BraA09t40689Z Brassica rapa HOM05D001456 ORTHO05D011781 4.2e-06 55.1 73 38.4
CARHR216620 Cardamine hirsuta HOM05D001456 ORTHO05D011865 5.5e-06 54.7 96 33.3
Thhalv10006264m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 7.2e-06 54.3 48 47.9
BcaC07g40423 Brassica carinata HOM05D016731 ORTHO05D011781 9.4e-06 53.9 79 34.2
C05p42720 Brassica napus HOM05D001456 ORTHO05D041427 9.4e-06 53.9 48 47.9
BolC5t32995H Brassica oleracea HOM05D001456 ORTHO05D041427 9.4e-06 53.9 48 47.9
BraA09t40690Z Brassica rapa HOM05D016731 ORTHO05D011781 9.4e-06 53.9 45 53.3


User provided reference genes

Program Settings