Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22720 Brassica carinata HOM05D008465 ORTHO05D010905 5.7e-275 950.3 477 100.0
BNapus_Darmor_BZH_scaffold_51p00050 Brassica napus HOM05D008465 ORTHO05D010905 8.0e-168 594.3 474 63.5
BolC7t41352H Brassica oleracea HOM05D008465 ORTHO05D010905 3.4e-102 376.3 253 72.7
BolC8t47743H Brassica oleracea HOM05D008465 ORTHO05D010905 4.9e-101 372.5 252 71.4
BNapus_Darmor_BZH_scaffold_51p00120 Brassica napus HOM05D008465 ORTHO05D010905 7.6e-94 348.6 250 69.6
BolC3t18787H Brassica oleracea HOM05D008465 ORTHO05D010905 2.6e-78 297.0 247 62.3
BNapus_Darmor_BZH_scaffold_51p00080 Brassica napus HOM05D008465 ORTHO05D010905 3.9e-74 283.1 227 64.8
C03p65320 Brassica napus HOM05D008465 ORTHO05D010905 1.2e-65 255.0 212 61.3
BraA01t02771Z Brassica rapa HOM05D008465 ORTHO05D010905 1.2e-59 235.0 243 54.7
BolC6t36352H Brassica oleracea HOM05D008465 ORTHO05D010905 7.5e-57 225.7 210 55.7
BNapus_Darmor_BZH_scaffold_94p00010 Brassica napus HOM05D008465 ORTHO05D010905 2.9e-53 213.8 194 59.8
BNapus_Darmor_BZH_scaffold_45p00040 Brassica napus HOM05D008465 ORTHO05D010905 1.2e-51 208.4 243 50.2
BNapus_Darmor_BZH_scaffold_143p00020 Brassica napus HOM05D008465 ORTHO05D010905 8.0e-51 205.7 243 49.8
BNapus_Darmor_BZH_scaffold_45p00060 Brassica napus HOM05D008465 ORTHO05D010905 2.8e-48 197.2 185 57.8
A10p08450 Brassica napus HOM05D008465 ORTHO05D010905 2.9e-40 170.6 115 75.7
BNapus_Darmor_BZH_scaffold_51p00010 Brassica napus HOM05D008465 ORTHO05D010905 2.9e-40 170.6 115 75.7
BNapus_Darmor_BZH_scaffold_258p00010 Brassica napus HOM05D008465 ORTHO05D010905 1.8e-39 167.9 115 74.8
BNapus_Darmor_BZH_scaffold_51p00140 Brassica napus HOM05D008465 ORTHO05D010905 7.0e-39 166.0 115 73.9
A08p07880 Brassica napus HOM05D008465 ORTHO05D010905 8.6e-37 159.1 110 74.5
A08p07810 Brassica napus HOM05D008465 ORTHO05D010905 1.5e-36 158.3 114 68.4
BNapus_Darmor_BZH_scaffold_69p00060 Brassica napus HOM05D008465 ORTHO05D010905 1.2e-33 148.7 125 60.8
BolC9t56658H Brassica oleracea HOM05D008465 ORTHO05D010905 2.0e-30 137.9 75 85.3
BNapus_Darmor_BZH_scaffold_143p00010 Brassica napus HOM05D008465 ORTHO05D010905 4.3e-28 130.2 112 64.3
BraA08t33371Z Brassica rapa HOM05D008465 ORTHO05D010905 8.3e-24 115.9 75 72.0
BolC9t56734H Brassica oleracea HOM05D008465 ORTHO05D010905 4.3e-20 103.6 75 66.7
BolC1t03374H Brassica oleracea HOM05D008629 ORTHO05D028253 6.8e-18 96.3 166 42.2
BraA08t33370Z Brassica rapa HOM05D008465 ORTHO05D010905 1.9e-15 88.2 67 68.7
AL3G41210 Arabidopsis lyrata HOM05D021647 ORTHO05D019732 7.8e-14 82.8 82 51.2
BolC8t49753H Brassica oleracea HOM05D008629 ORTHO05D012336 7.8e-14 82.8 91 49.5
BcaB08g35281 Brassica carinata HOM05D012556 ORTHO05D010905 5.1e-13 80.1 169 32.0
BolC1t03220H Brassica oleracea HOM05D008465 ORTHO05D010905 8.7e-13 79.3 45 84.4
BolC7t43726H Brassica oleracea HOM05D008629 ORTHO05D021920 1.1e-12 79.0 88 50.0
BolC4t23364H Brassica oleracea HOM05D008629 ORTHO05D021920 1.5e-12 78.6 99 48.5
SpUn0002_0040 Schrenkiella parvula HOM05D008465 ORTHO05D010905 1.8e-10 71.6 104 39.4
Sp1g33000 Schrenkiella parvula HOM05D018320 ORTHO05D010905 9.9e-09 65.9 44 61.4
BolC3t20910H Brassica oleracea HOM05D008629 ORTHO05D012336 1.7e-08 65.1 60 58.3
Carub.0002s0952 Capsella rubella HOM05D021647 ORTHO05D010905 1.1e-07 62.4 85 43.5
Sp4g08600 Schrenkiella parvula HOM05D018320 ORTHO05D000065 7.8e-06 56.2 207 30.0


User provided reference genes

Program Settings