Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22640 Brassica carinata HOM05D000589 ORTHO05D001885 6.9e-48 193.7 105 100.0
BcaC04g20325 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-26 121.7 102 64.7
BolC9t57367H Brassica oleracea HOM05D000589 ORTHO05D001885 3.3e-26 121.7 102 64.7
BcaC05g24982 Brassica carinata HOM05D000589 ORTHO05D001885 5.7e-26 120.9 86 72.1
BcaC01g05715 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-24 116.3 101 63.4
BolC3t14691H Brassica oleracea HOM05D000589 ORTHO05D000401 1.4e-24 116.3 101 63.4
BolC9t59088H Brassica oleracea HOM05D000589 ORTHO05D001885 4.1e-24 114.8 101 59.4
BcaC04g21855 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-23 113.2 96 61.5
BolC2t12526H Brassica oleracea HOM05D000589 ORTHO05D001885 7.7e-23 110.5 90 63.3
BcaC01g06283 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-22 110.2 99 60.6
BcaC02g11269 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-22 110.2 88 64.8
BcaC03g18390 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-22 109.0 86 65.1
BcaB04g20840 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-21 106.7 86 66.3
BraA09t40543Z Brassica rapa HOM05D000589 ORTHO05D001885 1.5e-21 106.3 90 62.2
BcaC04g18615 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-21 105.9 86 62.8
BolC6t38683H Brassica oleracea HOM05D000589 ORTHO05D000401 1.9e-21 105.9 102 57.8
BcaC02g10575 Brassica carinata HOM05D000589 ORTHO05D001885 4.2e-21 104.8 84 61.9
BcaC03g14696 Brassica carinata HOM05D000589 ORTHO05D001885 9.4e-21 103.6 108 52.8
BcaC09g48220 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-20 103.2 89 60.7
BolC3t14145H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-20 103.2 91 61.5
BolC7t43381H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-20 103.2 98 58.2
BolC6t37831H Brassica oleracea HOM05D000589 ORTHO05D001885 2.1e-20 102.4 91 61.5
BcaB03g14716 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-20 101.7 90 60.0
BcaC02g08266 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-20 101.7 99 55.6
BcaC08g45778 Brassica carinata HOM05D000589 ORTHO05D001885 4.7e-20 101.3 102 57.8
BolC8t49249H Brassica oleracea HOM05D000589 ORTHO05D001885 4.7e-20 101.3 97 61.9
BcaB02g11384 Brassica carinata HOM05D000589 ORTHO05D001885 6.1e-20 100.9 90 58.9
BcaC05g26629 Brassica carinata HOM05D000589 ORTHO05D001885 6.1e-20 100.9 95 60.0
BcaC09g51394 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-19 100.1 97 58.8
BcaB04g18594 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-19 99.8 86 62.8
BcaB04g18499 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-19 99.4 99 61.6
BcaB06g25902 Brassica carinata HOM05D000589 ORTHO05D001885 2.3e-19 99.0 88 62.5
BolC4t22259H Brassica oleracea HOM05D000589 ORTHO05D001885 6.8e-19 97.4 91 57.1
BcaB05g24814 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-18 96.3 85 57.6
BcaNung03387 Brassica carinata HOM05D000169 ORTHO05D001885 3.4e-18 95.1 95 58.9
BcaC05g28515 Brassica carinata HOM05D000589 ORTHO05D001885 5.7e-18 94.4 89 59.6
BolC5t33024H Brassica oleracea HOM05D000589 ORTHO05D001885 7.5e-18 94.0 96 53.1
BraA06t25708Z Brassica rapa HOM05D000589 ORTHO05D001885 9.8e-18 93.6 90 57.8
BolC9t53951H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-17 93.2 80 60.0
BcaB03g15429 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-17 92.8 89 58.4
BolC5t29856H Brassica oleracea HOM05D000589 ORTHO05D001885 2.8e-17 92.0 95 57.9
BcaC01g04079 Brassica carinata HOM05D000589 ORTHO05D001885 8.3e-17 90.5 87 59.8
BcaC04g23266 Brassica carinata HOM05D000589 ORTHO05D001885 8.3e-17 90.5 87 58.6
BcaC07g42449 Brassica carinata HOM05D000589 ORTHO05D001885 8.3e-17 90.5 91 57.1
BcaB06g28252 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-16 90.1 90 55.6
C07p49130 Brassica napus HOM05D000589 ORTHO05D001885 1.1e-16 90.1 91 53.8
BcaC02g11017 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-16 89.7 102 51.0
BcaC05g27662 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-16 89.7 82 57.3
BcaC08g44836 Brassica carinata HOM05D000042 ORTHO05D000028 1.4e-16 89.7 88 58.0
BolC4t23737H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-16 89.7 102 51.0
BcaB03g16415 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-16 88.6 102 52.9
BcaB07g32763 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-16 88.2 102 51.0
BcaC06g33596 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-16 88.2 90 54.4
A09p69380 Brassica napus HOM05D000696 ORTHO05D001068 4.1e-16 88.2 102 50.0
BolC2t08273H Brassica oleracea HOM05D000589 ORTHO05D000401 4.1e-16 88.2 89 53.9
BolC8t52930H Brassica oleracea HOM05D000696 ORTHO05D001068 4.1e-16 88.2 102 50.0
BcaC02g10987 Brassica carinata HOM05D000589 ORTHO05D001885 5.4e-16 87.8 88 53.4
BcaC02g12561 Brassica carinata HOM05D000589 ORTHO05D001885 9.1e-16 87.0 97 50.5
BcaB01g03374 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-15 86.7 93 53.8
BcaB05g21670 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-15 86.7 92 53.3
BcaB05g21779 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-15 86.7 97 52.6
BcaC07g38698 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-15 86.7 90 58.9
BolC7t41896H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-15 86.7 91 52.7
BcaB01g03595 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-15 86.3 89 56.2
BcaC06g35518 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-15 86.3 97 50.5
BcaNung02804 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-15 85.9 93 52.7
BraA09t39932Z Brassica rapa HOM05D000589 ORTHO05D001885 2.0e-15 85.9 91 52.7
BcaC04g19449 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-15 85.5 99 51.5
BcaC05g28077 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-15 85.5 89 55.1
BolC5t32842H Brassica oleracea HOM05D000589 ORTHO05D001885 2.7e-15 85.5 89 55.1
BolC8t49853H Brassica oleracea HOM05D000589 ORTHO05D001885 2.7e-15 85.5 102 49.0
BcaC04g20618 Brassica carinata HOM05D000506 ORTHO05D000369 4.5e-15 84.7 81 59.3
BolC3t21112H Brassica oleracea HOM05D000589 ORTHO05D001885 4.5e-15 84.7 102 49.0
BcaC01g03361 Brassica carinata HOM05D000589 ORTHO05D001885 5.9e-15 84.3 104 47.1
BcaC08g47072 Brassica carinata HOM05D000589 ORTHO05D001885 5.9e-15 84.3 89 56.2
BcaC05g25220 Brassica carinata HOM05D000589 ORTHO05D001885 7.7e-15 84.0 102 48.0
BolC4t28438H Brassica oleracea HOM05D000589 ORTHO05D001885 2.2e-14 82.4 102 48.0
BcaB05g25134 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-14 82.0 90 50.0
BcaC08g43983 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-14 81.6 73 56.2
BolC6t36567H Brassica oleracea HOM05D000589 ORTHO05D001885 3.8e-14 81.6 73 56.2
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 3.8e-14 81.6 89 51.7
BcaC01g00211 Brassica carinata HOM05D000589 ORTHO05D001885 8.5e-14 80.5 88 54.5
BolC5t33392H Brassica oleracea HOM05D000589 ORTHO05D001885 1.1e-13 80.1 87 51.7
BcaC02g07926 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-13 79.7 93 50.5
BcaC08g45440 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-13 79.7 91 51.6
BolC5t30704H Brassica oleracea HOM05D000589 ORTHO05D000401 1.5e-13 79.7 73 56.2
BcaC02g07277 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-13 79.3 88 52.3
BolC1t00773H Brassica oleracea HOM05D000589 ORTHO05D001885 1.9e-13 79.3 91 50.5
BcaC04g23550 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-13 78.6 102 44.1
BcaB01g01212 Brassica carinata HOM05D000589 ORTHO05D001885 4.2e-13 78.2 85 48.2
BcaC04g23115 Brassica carinata HOM05D000589 ORTHO05D001885 5.5e-13 77.8 89 52.8
BcaB01g01724 Brassica carinata HOM05D000589 ORTHO05D001885 7.2e-13 77.4 96 49.0
BcaB05g21820 Brassica carinata HOM05D000589 ORTHO05D001885 7.2e-13 77.4 86 53.5
BolC3t19562H Brassica oleracea HOM05D000589 ORTHO05D001885 9.5e-13 77.0 99 46.5
BolC9t53328H Brassica oleracea HOM05D000589 ORTHO05D001885 1.6e-12 76.3 85 52.9
BcaB04g18869 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-12 75.5 92 51.1
BolC7t44689H Brassica oleracea HOM05D000589 ORTHO05D001885 2.7e-12 75.5 98 44.9
BcaC02g10306 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-12 75.1 90 46.7
BcaB01g01294 Brassica carinata HOM05D000589 ORTHO05D001885 6.1e-12 74.3 115 41.7
BcaB04g19137 Brassica carinata HOM05D000589 ORTHO05D001885 6.1e-12 74.3 102 45.1
BcaNung03683 Brassica carinata HOM05D000589 ORTHO05D001885 6.1e-12 74.3 101 43.6
BcaB05g22170 Brassica carinata HOM05D000589 ORTHO05D001885 8.0e-12 73.9 101 43.6
BcaC05g29515 Brassica carinata HOM05D000589 ORTHO05D001885 8.0e-12 73.9 91 46.2
BcaC05g24704 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-11 73.6 102 45.1
BcaC02g12212 Brassica carinata HOM05D000589 ORTHO05D001885 4.0e-11 71.6 102 43.1
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 4.0e-11 71.6 102 43.1
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 4.4e-10 68.2 96 41.7
BcaC05g25277 Brassica carinata HOM05D000589 ORTHO05D001885 7.5e-10 67.4 102 41.2
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 7.5e-10 67.4 93 43.0
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-09 66.6 100 39.0
BolC2t11199H Brassica oleracea HOM05D000589 ORTHO05D001885 2.2e-09 65.9 102 41.2
BolC9t58427H Brassica oleracea HOM05D000589 ORTHO05D000401 2.2e-09 65.9 80 45.0
BcaB03g16507 Brassica carinata HOM05D000589 ORTHO05D090546 4.9e-09 64.7 42 83.3
BcaC03g18139 Brassica carinata HOM05D000589 ORTHO05D001885 8.3e-09 63.9 85 44.7
BcaB07g32349 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-08 63.5 89 38.2
BcaC08g46020 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-08 63.5 66 50.0
BcaC02g10332 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-08 63.2 84 51.2
BcaC09g51619 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-08 63.2 47 72.3
BcaC03g17674 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-08 62.8 84 51.2
BcaC02g12351 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-08 62.4 90 42.2
BolC8t47336H Brassica oleracea HOM05D000589 ORTHO05D000401 2.4e-08 62.4 102 42.2
BcaC01g05444 Brassica carinata HOM05D000228 ORTHO05D001885 4.1e-08 61.6 59 54.2
BcaC06g35383 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-08 61.6 89 42.7
BolC8t47924H Brassica oleracea HOM05D000589 ORTHO05D000401 4.1e-08 61.6 87 40.2
BcaB03g12711 Brassica carinata HOM05D000589 ORTHO05D001885 7.0e-08 60.8 101 39.6
BcaB03g13920 Brassica carinata HOM05D000589 ORTHO05D001885 7.0e-08 60.8 89 42.7
BcaB06g28622 Brassica carinata HOM05D000888 ORTHO05D000740 7.0e-08 60.8 76 43.4
BolC1t02802H Brassica oleracea HOM05D000589 ORTHO05D000401 7.0e-08 60.8 101 39.6
BcaC05g29003 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-07 60.1 100 38.0
BcaB03g15647 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-07 59.7 88 38.6
BcaC09g48963 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-07 59.3 88 38.6
BolC7t46298H Brassica oleracea HOM05D000589 ORTHO05D001885 2.0e-07 59.3 52 57.7
BraA09t38531Z Brassica rapa HOM05D000589 ORTHO05D001885 2.0e-07 59.3 91 40.7
BcaC04g21586 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-07 58.9 90 40.0
BcaC02g11767 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-07 58.5 100 38.0
BcaC07g39835 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-07 58.5 101 35.6
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 3.5e-07 58.5 101 38.6
BcaC04g20928 Brassica carinata HOM05D000589 ORTHO05D001885 5.9e-07 57.8 86 41.9
BcaB06g28242 Brassica carinata HOM05D000589 ORTHO05D001885 7.7e-07 57.4 91 39.6
BcaB08g35560 Brassica carinata HOM05D000589 ORTHO05D001885 7.7e-07 57.4 98 37.8
BcaC03g15667 Brassica carinata HOM05D000589 ORTHO05D001885 7.7e-07 57.4 93 41.9
BcaC09g50986 Brassica carinata HOM05D000589 ORTHO05D001885 7.7e-07 57.4 48 68.8
BcaNung04078 Brassica carinata HOM05D000589 ORTHO05D001885 7.7e-07 57.4 91 39.6
BraA03t15656Z Brassica rapa HOM05D000589 ORTHO05D001885 7.7e-07 57.4 67 49.3
BcaB04g20296 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-06 57.0 104 37.5
BcaC04g22408 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-06 57.0 102 39.2
BcaNung04705 Brassica carinata HOM05D032946 ORTHO05D001885 1.0e-06 57.0 48 68.8
BraA07t28350Z Brassica rapa HOM05D000589 ORTHO05D001885 1.0e-06 57.0 101 37.6
BcaB02g10165 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-06 56.6 48 66.7
BcaB05g24213 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-06 56.6 92 42.4
BolC6t36507H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-06 56.6 63 47.6
BcaB01g00801 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-06 56.2 48 66.7
BcaC05g28962 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-06 56.2 94 40.4
BcaC08g45577 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-06 56.2 100 39.0
BolC2t10463H Brassica oleracea HOM05D000589 ORTHO05D000401 1.7e-06 56.2 91 40.7
BcaB01g02011 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-06 55.1 93 38.7
BcaB05g23757 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-06 55.1 47 57.4
BcaC04g22605 Brassica carinata HOM05D000589 ORTHO05D001885 5.0e-06 54.7 89 37.1
BolC6t37491H Brassica oleracea HOM05D000589 ORTHO05D001885 5.0e-06 54.7 84 41.7
Carub.0001s4113 Capsella rubella HOM05D000589 ORTHO05D001885 5.0e-06 54.7 93 36.6
Carub.0003s0398 Capsella rubella HOM05D000589 ORTHO05D001885 5.0e-06 54.7 93 36.6
Carub.0005s0910 Capsella rubella HOM05D000589 ORTHO05D001885 5.0e-06 54.7 93 35.5
BcaC06g32032 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-06 54.3 99 40.4
BcaC06g33454 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-06 54.3 89 42.7
BcaB06g27274 Brassica carinata HOM05D000589 ORTHO05D001885 8.6e-06 53.9 87 39.1
BcaB07g32905 Brassica carinata HOM05D000589 ORTHO05D001885 8.6e-06 53.9 86 39.5
BcaC01g05146 Brassica carinata HOM05D000589 ORTHO05D001885 8.6e-06 53.9 101 34.7
BcaC04g22143 Brassica carinata HOM05D000589 ORTHO05D001885 8.6e-06 53.9 92 38.0
BcaC09g50125 Brassica carinata HOM05D000589 ORTHO05D001885 8.6e-06 53.9 86 39.5
BraA08t32605Z Brassica rapa HOM05D000589 ORTHO05D001885 8.6e-06 53.9 84 41.7


User provided reference genes

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