Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22638 Brassica carinata HOM05D007887 ORTHO05D009725 1.7e-48 195.7 100 100.0
BraA02t05730Z Brassica rapa HOM05D007887 ORTHO05D009725 1.9e-42 175.6 100 93.0
BcaC03g13976 Brassica carinata HOM05D007887 ORTHO05D009725 5.4e-42 174.1 100 92.0
BolC2t07269H Brassica oleracea HOM05D007887 ORTHO05D009725 9.2e-42 173.3 100 92.0
C02p11720 Brassica napus HOM05D007887 ORTHO05D009725 1.2e-41 172.9 100 92.0
BraA02t05732Z Brassica rapa HOM05D007887 ORTHO05D009725 1.1e-39 166.4 101 85.1
C03p12840 Brassica napus HOM05D007887 ORTHO05D009725 1.4e-37 159.5 100 85.0
BolC3t13748H Brassica oleracea HOM05D007887 ORTHO05D009725 4.0e-37 157.9 100 84.0
BraA03t10429Z Brassica rapa HOM05D007887 ORTHO05D009725 3.4e-36 154.8 98 82.7
A10p17620 Brassica napus HOM05D007887 ORTHO05D009725 7.6e-36 153.7 104 79.8
BraA10t43842Z Brassica rapa HOM05D007887 ORTHO05D009725 7.6e-36 153.7 104 79.8
BcaC04g19700 Brassica carinata HOM05D007887 ORTHO05D009725 9.9e-36 153.3 104 79.8
C09p53030 Brassica napus HOM05D007887 ORTHO05D009725 9.9e-36 153.3 104 79.8
BolC9t58177H Brassica oleracea HOM05D007887 ORTHO05D009725 1.3e-35 152.9 104 78.8
A03p11140 Brassica napus HOM05D007887 ORTHO05D009725 1.9e-34 149.1 102 79.4
BcaB01g04657 Brassica carinata HOM05D007887 ORTHO05D009725 3.2e-34 148.3 103 80.6
Sp6g21990 Schrenkiella parvula HOM05D007887 ORTHO05D009725 5.4e-34 147.5 105 79.0
BcaB08g36339 Brassica carinata HOM05D007887 ORTHO05D009725 6.0e-33 144.1 104 78.8
BolC2t07271H Brassica oleracea HOM05D007887 ORTHO05D009725 6.6e-32 140.6 100 77.0
CARHR274070 Cardamine hirsuta HOM05D007887 ORTHO05D009725 8.7e-32 140.2 100 75.0
Thhalv10015113m.g Eutrema salsugineum HOM05D007887 ORTHO05D009725 1.5e-31 139.4 103 77.7
AT5G60400 Arabidopsis thaliana HOM05D007887 ORTHO05D009725 4.0e-29 131.3 103 73.8
AL8G37010 Arabidopsis lyrata HOM05D007887 ORTHO05D009725 1.7e-27 125.9 103 71.8
Carub.0008s2111 Capsella rubella HOM05D007887 ORTHO05D009725 2.7e-25 118.6 103 68.9
Aa31LG1G12450 Aethionema arabicum HOM05D007887 ORTHO05D009725 7.3e-23 110.5 102 65.7
C02p11740 Brassica napus HOM05D007887 ORTHO05D009725 8.7e-16 87.0 51 80.4
CiPaw.13G108000 Carya illinoinensis HOM05D007887 ORTHO05D009725 2.2e-11 72.4 102 50.0
CSS0010599 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 2.9e-11 72.0 101 49.5
CSS0013187 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 4.9e-11 71.2 101 49.5
THA.LOC104799488 Tarenaya hassleriana HOM05D007887 ORTHO05D009725 6.5e-11 70.9 106 48.1
Hma1.2p1_0071F.1_g038090 Hydrangea macrophylla HOM05D007887 ORTHO05D009725 4.2e-10 68.2 100 47.0
Actinidia24082 Actinidia chinensis HOM05D007887 ORTHO05D009725 5.5e-10 67.8 87 49.4
Manes.04G024800 Manihot esculenta HOM05D007887 ORTHO05D009725 7.9e-09 63.9 102 48.0
Haze_23901 Corylus avellana HOM05D007887 ORTHO05D009725 1.0e-08 63.5 102 45.1
Manes.11G141900 Manihot esculenta HOM05D007887 ORTHO05D009725 1.3e-08 63.2 101 44.6
Prupe.6G095800 Prunus persica HOM05D007887 ORTHO05D009725 1.3e-08 63.2 102 45.1
MD03G1112500 Malus domestica HOM05D007887 ORTHO05D009725 3.0e-08 62.0 102 47.1
TAR633G0435 Trochodendron aralioides HOM05D007887 ORTHO05D009725 5.1e-08 61.2 69 47.8
Thecc.09G259300 Theobroma cacao HOM05D007887 ORTHO05D009725 8.7e-08 60.5 101 42.6
Cfa011356 Carpinus fangiana HOM05D007887 ORTHO05D009725 1.1e-07 60.1 104 44.2
MD11G1131400 Malus domestica HOM05D007887 ORTHO05D009725 1.5e-07 59.7 102 40.2
Medtr4g060620 Medicago truncatula HOM05D007887 ORTHO05D009725 4.3e-07 58.2 101 40.6
GSVIVG01025148001 Vitis vinifera HOM05D007887 ORTHO05D009725 4.3e-07 58.2 74 43.2
PSO339G0915 Papaver somniferum HOM05D007887 ORTHO05D009725 5.7e-07 57.8 102 41.2
Lalb_Chr19g0137421 Lupinus albus HOM05D007887 ORTHO05D009725 1.6e-06 56.2 99 42.4
Cc01_g11470 Coffea canephora HOM05D007887 ORTHO05D009725 4.8e-06 54.7 105 39.0
FvH4_3g33040 Fragaria vesca HOM05D007887 ORTHO05D009725 4.8e-06 54.7 103 41.7
FAN16G3357 Fragaria x ananassa HOM05D007887 ORTHO05D009725 8.2e-06 53.9 104 43.3


User provided reference genes

Program Settings