Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22632 Brassica carinata HOM05D000026 ORTHO05D021864 3.3e-59 231.5 116 100.0
AL8G36890 Arabidopsis lyrata HOM05D000026 ORTHO05D000094 2.0e-48 195.7 119 83.2
Carub.0008s2101 Capsella rubella HOM05D000026 ORTHO05D000094 5.9e-48 194.1 110 88.2
Thhalv10012788m.g Eutrema salsugineum HOM05D000026 ORTHO05D000094 7.7e-48 193.7 110 88.2
CARHR273970 Cardamine hirsuta HOM05D000026 ORTHO05D000094 5.0e-47 191.0 110 88.2
Sp6g21910 Schrenkiella parvula HOM05D000026 ORTHO05D000094 2.5e-46 188.7 110 87.3
BcaB08g36325 Brassica carinata HOM05D000026 ORTHO05D000094 3.6e-45 184.9 110 82.7
BcaC04g19683 Brassica carinata HOM05D000026 ORTHO05D000094 6.1e-45 184.1 110 83.6
A10p17450 Brassica napus HOM05D000026 ORTHO05D000094 6.1e-45 184.1 110 83.6
C09p52900 Brassica napus HOM05D000026 ORTHO05D000094 6.1e-45 184.1 110 83.6
BraA10t43827Z Brassica rapa HOM05D000026 ORTHO05D000094 6.1e-45 184.1 110 83.6
BolC9t58157H Brassica oleracea HOM05D000026 ORTHO05D000094 7.9e-45 183.7 110 82.7
AT5G60300 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 2.3e-44 182.2 108 86.1
BcaB01g04650 Brassica carinata HOM05D000026 ORTHO05D000094 2.4e-41 172.2 115 77.4
C03p12920 Brassica napus HOM05D000026 ORTHO05D000094 1.6e-37 159.5 115 74.8
BraA10t43830Z Brassica rapa HOM05D000026 ORTHO05D000094 5.1e-36 154.5 110 70.9
Aa31LG1G12390 Aethionema arabicum HOM05D000026 ORTHO05D000094 1.5e-35 152.9 102 80.4
BcaB08g36327 Brassica carinata HOM05D000026 ORTHO05D021864 5.3e-33 144.4 110 68.2
C09p52930 Brassica napus HOM05D000026 ORTHO05D000094 2.2e-31 139.0 102 71.6
BcaC04g19686 Brassica carinata HOM05D000026 ORTHO05D000094 5.0e-31 137.9 101 72.3
BolC9t58160H Brassica oleracea HOM05D000026 ORTHO05D000094 1.1e-30 136.7 102 70.6
A10p17500 Brassica napus HOM05D000026 ORTHO05D000094 1.4e-28 129.8 99 68.7
THA.LOC104799487 Tarenaya hassleriana HOM05D000026 ORTHO05D000094 3.7e-26 121.7 110 60.0
THA.LOC104810841 Tarenaya hassleriana HOM05D000026 ORTHO05D000094 2.6e-24 115.5 109 59.6
BcaB01g01086 Brassica carinata HOM05D000026 ORTHO05D000094 1.3e-23 113.2 106 57.5
A06p21400 Brassica napus HOM05D000026 ORTHO05D000094 1.3e-23 113.2 106 60.4
BraA06t25227Z Brassica rapa HOM05D000026 ORTHO05D000094 1.3e-23 113.2 106 60.4
Sp5g15930 Schrenkiella parvula HOM05D000026 ORTHO05D000094 6.5e-23 110.9 112 55.4
BcaC01g01970 Brassica carinata HOM05D000026 ORTHO05D000094 1.9e-22 109.4 106 58.5
C03p69950 Brassica napus HOM05D000026 ORTHO05D000094 1.9e-22 109.4 106 58.5
BolC3t19255H Brassica oleracea HOM05D000026 ORTHO05D000094 1.9e-22 109.4 106 58.5
AT3G45430 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 1.2e-21 106.7 78 71.8
Carub.0005s1126 Capsella rubella HOM05D000026 ORTHO05D000094 1.6e-21 106.3 112 55.4
Thhalv10012880m.g Eutrema salsugineum HOM05D000026 ORTHO05D000094 2.3e-20 102.4 80 68.8
BcaC04g19691 Brassica carinata HOM05D000026 ORTHO05D000094 1.1e-17 93.6 79 64.6
A10p17540 Brassica napus HOM05D000026 ORTHO05D000094 1.1e-17 93.6 79 65.8
C09p52950 Brassica napus HOM05D000026 ORTHO05D000094 1.1e-17 93.6 79 64.6
BolC9t58169H Brassica oleracea HOM05D000026 ORTHO05D000094 1.1e-17 93.6 79 64.6
Carub.0008s2102 Capsella rubella HOM05D000026 ORTHO05D000094 3.1e-17 92.0 79 65.8
BcaB08g36331 Brassica carinata HOM05D000026 ORTHO05D000094 9.1e-17 90.5 79 64.6
C02p11820 Brassica napus HOM05D000026 ORTHO05D000094 1.2e-16 90.1 73 68.5
BraA10t43835Z Brassica rapa HOM05D000026 ORTHO05D000094 1.2e-16 90.1 78 62.8
BcaB05g22633 Brassica carinata HOM05D000026 ORTHO05D000094 1.6e-16 89.7 74 67.6
BcaC03g13983 Brassica carinata HOM05D000026 ORTHO05D000094 7.7e-16 87.4 73 65.8
BolC2t07276H Brassica oleracea HOM05D000026 ORTHO05D000094 1.0e-15 87.0 73 65.8
A03p11240 Brassica napus HOM05D000026 ORTHO05D021864 2.5e-14 82.4 62 69.4
BcaB01g01858 Brassica carinata HOM05D000026 ORTHO05D000094 1.2e-13 80.1 79 54.4
AT3G45330 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 1.0e-12 77.0 82 54.9
Thhalv10002427m.g Eutrema salsugineum HOM05D000026 ORTHO05D000094 3.0e-12 75.5 80 53.8
A09p25840 Brassica napus HOM05D000026 ORTHO05D000094 4.0e-12 75.1 79 54.4
BolC9t56116H Brassica oleracea HOM05D000026 ORTHO05D000094 6.8e-12 74.3 79 54.4
BraA06t25230Z Brassica rapa HOM05D000026 ORTHO05D000094 8.8e-12 73.9 82 53.7
CARHR150480 Cardamine hirsuta HOM05D000026 ORTHO05D021864 8.8e-12 73.9 82 51.2
BcaC01g01973 Brassica carinata HOM05D000026 ORTHO05D000094 1.2e-11 73.6 82 53.7
C03p69920 Brassica napus HOM05D000026 ORTHO05D000094 1.2e-11 73.6 82 53.7
BolC3t19252H Brassica oleracea HOM05D000026 ORTHO05D000094 1.2e-11 73.6 82 53.7
AL5G23950 Arabidopsis lyrata HOM05D000026 ORTHO05D000094 1.5e-11 73.2 82 52.4
AT5G60310 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 1.5e-11 73.2 67 62.7
BcaB01g01090 Brassica carinata HOM05D000026 ORTHO05D000094 1.5e-11 73.2 82 52.4
Carub.0005s1123 Capsella rubella HOM05D000026 ORTHO05D000094 1.5e-11 73.2 57 64.9
Thhalv10002842m.g Eutrema salsugineum HOM05D000026 ORTHO05D000094 1.5e-11 73.2 58 62.1
CARHR150310 Cardamine hirsuta HOM05D000026 ORTHO05D000094 2.0e-11 72.8 57 59.6
BraA09t38154Z Brassica rapa HOM05D000026 ORTHO05D000094 2.6e-11 72.4 79 53.2
A06p21440 Brassica napus HOM05D000026 ORTHO05D000094 3.4e-11 72.0 82 52.4
AT5G60320 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 7.5e-11 70.9 73 53.4
AL5G23970 Arabidopsis lyrata HOM05D000026 ORTHO05D000094 9.8e-11 70.5 57 61.4
Aa31LG4G14650 Aethionema arabicum HOM05D000026 ORTHO05D000094 1.3e-10 70.1 63 57.1
Carub.0005s1127 Capsella rubella HOM05D000026 ORTHO05D000094 1.3e-10 70.1 80 51.2
CARHR150490 Cardamine hirsuta HOM05D000026 ORTHO05D000094 1.3e-10 70.1 82 52.4
Thhalv10012851m.g Eutrema salsugineum HOM05D000026 ORTHO05D000094 1.3e-10 70.1 78 51.3
Sp6g21920 Schrenkiella parvula HOM05D000026 ORTHO05D000094 1.7e-10 69.7 73 54.8
BcaB01g04651 Brassica carinata HOM05D000026 ORTHO05D000094 2.2e-10 69.3 73 53.4
Carub.0005s1125 Capsella rubella HOM05D000026 ORTHO05D000094 2.2e-10 69.3 57 61.4
CARHR150390 Cardamine hirsuta HOM05D000026 ORTHO05D000094 2.2e-10 69.3 55 61.8
C03p67280 Brassica napus HOM05D000026 ORTHO05D000094 3.7e-10 68.6 91 45.1
CARHR150340 Cardamine hirsuta HOM05D000026 ORTHO05D000094 3.7e-10 68.6 76 51.3
AT3G45410 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 4.8e-10 68.2 57 59.6
AT5G60280 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 6.3e-10 67.8 60 56.7
BcaC04g19681 Brassica carinata HOM05D000026 ORTHO05D000094 6.3e-10 67.8 79 49.4
C09p52880 Brassica napus HOM05D000026 ORTHO05D000094 6.3e-10 67.8 79 49.4
BolC9t58155H Brassica oleracea HOM05D000026 ORTHO05D000094 6.3e-10 67.8 79 49.4
Carub.0008s2103 Capsella rubella HOM05D000026 ORTHO05D000094 6.3e-10 67.8 73 52.1
Sp6g21890 Schrenkiella parvula HOM05D000026 ORTHO05D000094 6.3e-10 67.8 77 51.9
BcaB05g22629 Brassica carinata HOM05D000026 ORTHO05D000094 8.3e-10 67.4 78 50.0
BcaC01g01971 Brassica carinata HOM05D000026 ORTHO05D000094 8.3e-10 67.4 68 54.4
C03p69940 Brassica napus HOM05D000026 ORTHO05D000094 8.3e-10 67.4 68 54.4
C07p05800 Brassica napus HOM05D000026 ORTHO05D000094 8.3e-10 67.4 54 61.1
BolC3t19254H Brassica oleracea HOM05D000026 ORTHO05D000094 8.3e-10 67.4 68 54.4
BcaC01g02188 Brassica carinata HOM05D000026 ORTHO05D000094 1.1e-09 67.0 80 47.5
A06p26910 Brassica napus HOM05D000026 ORTHO05D000094 1.1e-09 67.0 80 47.5
BolC3t13755H Brassica oleracea HOM05D000026 ORTHO05D000094 1.1e-09 67.0 73 53.4
BolSC21t60297H Brassica oleracea HOM05D000026 ORTHO05D000094 1.1e-09 67.0 80 47.5
AL5G23990 Arabidopsis lyrata HOM05D000026 ORTHO05D000094 1.4e-09 66.6 80 48.8
A07p03560 Brassica napus HOM05D000026 ORTHO05D000094 1.4e-09 66.6 54 61.1
A10p17430 Brassica napus HOM05D000026 ORTHO05D000094 1.4e-09 66.6 79 48.1
BraA10t43825Z Brassica rapa HOM05D000026 ORTHO05D000094 1.4e-09 66.6 79 48.1
Thhalv10015671m.g Eutrema salsugineum HOM05D000026 ORTHO05D000094 1.4e-09 66.6 73 53.4
THA.LOC104814843 Tarenaya hassleriana HOM05D000026 ORTHO05D000094 1.4e-09 66.6 81 50.6
AT3G45390 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 1.8e-09 66.2 82 45.1
BraA06t25629Z Brassica rapa HOM05D000026 ORTHO05D000094 1.8e-09 66.2 80 47.5
Carub.0005s1121 Capsella rubella HOM05D000026 ORTHO05D000094 1.8e-09 66.2 80 48.8
CARHR273950 Cardamine hirsuta HOM05D000026 ORTHO05D000094 1.8e-09 66.2 77 50.6
Sp5g15950 Schrenkiella parvula HOM05D000026 ORTHO05D000094 1.8e-09 66.2 57 56.1
BcaB08g36323 Brassica carinata HOM05D000026 ORTHO05D000094 2.4e-09 65.9 79 48.1
Sp5g15920 Schrenkiella parvula HOM05D000026 ORTHO05D000094 2.4e-09 65.9 80 46.2
A06p21410 Brassica napus HOM05D000026 ORTHO05D000094 3.1e-09 65.5 68 52.9
BraA03t10436Z Brassica rapa HOM05D000026 ORTHO05D000094 3.1e-09 65.5 73 52.1
BraA06t25228Z Brassica rapa HOM05D000026 ORTHO05D000094 3.1e-09 65.5 68 52.9
BcaC01g01969 Brassica carinata HOM05D000026 ORTHO05D000094 4.1e-09 65.1 80 46.2
C03p12910 Brassica napus HOM05D000026 ORTHO05D000094 4.1e-09 65.1 73 52.1
C03p69960 Brassica napus HOM05D000026 ORTHO05D000094 4.1e-09 65.1 80 46.2
BolC3t19256H Brassica oleracea HOM05D000026 ORTHO05D000094 4.1e-09 65.1 80 46.2
Sp5g15940 Schrenkiella parvula HOM05D000026 ORTHO05D000094 4.1e-09 65.1 61 55.7
Sp5g15970 Schrenkiella parvula HOM05D000026 ORTHO05D000094 4.1e-09 65.1 69 52.2
AT5G60270 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 5.4e-09 64.7 79 46.8
Sp6g21880 Schrenkiella parvula HOM05D000026 ORTHO05D000094 5.4e-09 64.7 79 46.8
AL5G23980 Arabidopsis lyrata HOM05D000026 ORTHO05D000094 7.0e-09 64.3 57 57.9
Carub.0008s2100 Capsella rubella HOM05D000026 ORTHO05D000094 7.0e-09 64.3 69 50.7
CARHR273930 Cardamine hirsuta HOM05D000026 ORTHO05D000094 7.0e-09 64.3 70 52.9
AL8G36860 Arabidopsis lyrata HOM05D000026 ORTHO05D000094 9.1e-09 63.9 79 46.8
BcaB01g01085 Brassica carinata HOM05D000026 ORTHO05D000094 9.1e-09 63.9 80 46.2
CARHR150240 Cardamine hirsuta HOM05D000026 ORTHO05D000094 9.1e-09 63.9 80 50.0
Thhalv10012889m.g Eutrema salsugineum HOM05D000026 ORTHO05D000094 9.1e-09 63.9 78 47.4
AT3G45440 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 1.2e-08 63.5 79 48.1
A03p11230 Brassica napus HOM05D000026 ORTHO05D000094 1.2e-08 63.5 73 50.7
A10p17440 Brassica napus HOM05D000026 ORTHO05D000094 1.2e-08 63.5 73 50.7
BraA10t43826Z Brassica rapa HOM05D000026 ORTHO05D000094 1.2e-08 63.5 78 48.7
A06p21380 Brassica napus HOM05D000026 ORTHO05D000094 1.6e-08 63.2 79 45.6
A10p17390 Brassica napus HOM05D000026 ORTHO05D000094 1.6e-08 63.2 43 62.8
C03p12940 Brassica napus HOM05D000026 ORTHO05D000094 1.6e-08 63.2 74 45.9
C09p52800 Brassica napus HOM05D000026 ORTHO05D000094 1.6e-08 63.2 43 62.8
BolC9t58143H Brassica oleracea HOM05D000026 ORTHO05D000094 1.6e-08 63.2 43 62.8
AL8G36870 Arabidopsis lyrata HOM05D000026 ORTHO05D000094 2.0e-08 62.8 60 55.0
BcaC03g13984 Brassica carinata HOM05D000026 ORTHO05D000094 2.0e-08 62.8 78 46.2
BcaC06g36273 Brassica carinata HOM05D000026 ORTHO05D000094 2.0e-08 62.8 40 65.0
BolC2t07277H Brassica oleracea HOM05D000026 ORTHO05D000094 2.0e-08 62.8 78 46.2
Carub.0008s2099 Capsella rubella HOM05D000026 ORTHO05D000094 2.0e-08 62.8 79 44.3
CARHR150500 Cardamine hirsuta HOM05D000026 ORTHO05D000094 2.0e-08 62.8 82 47.6
BcaB01g01087 Brassica carinata HOM05D000026 ORTHO05D000094 2.7e-08 62.4 68 52.9
BcaB05g22631 Brassica carinata HOM05D000026 ORTHO05D000094 2.7e-08 62.4 79 45.6
BcaC04g19673 Brassica carinata HOM05D000026 ORTHO05D000094 2.7e-08 62.4 79 45.6
C09p52760 Brassica napus HOM05D000026 ORTHO05D000094 2.7e-08 62.4 79 45.6
BcaC04g19682 Brassica carinata HOM05D000026 ORTHO05D000094 3.5e-08 62.0 78 48.7
C09p52890 Brassica napus HOM05D000026 ORTHO05D000094 3.5e-08 62.0 78 48.7
BolC9t58156H Brassica oleracea HOM05D000026 ORTHO05D000094 3.5e-08 62.0 78 48.7
BraA10t43823Z Brassica rapa HOM05D000026 ORTHO05D000094 3.5e-08 62.0 60 50.0
CARHR273940 Cardamine hirsuta HOM05D000026 ORTHO05D000094 3.5e-08 62.0 76 48.7
C02p11830 Brassica napus HOM05D000026 ORTHO05D000094 5.9e-08 61.2 78 46.2
AL8G36930 Arabidopsis lyrata HOM05D000026 ORTHO05D000094 7.7e-08 60.8 51 56.9
BcaB08g36319 Brassica carinata HOM05D000026 ORTHO05D000094 7.7e-08 60.8 78 43.6
BcaB01g04649 Brassica carinata HOM05D000026 ORTHO05D000094 1.0e-07 60.5 43 60.5
BcaB08g36320 Brassica carinata HOM05D000026 ORTHO05D000094 1.0e-07 60.5 78 46.2
BcaB08g36324 Brassica carinata HOM05D000026 ORTHO05D000094 1.0e-07 60.5 78 47.4
CARHR289220 Cardamine hirsuta HOM05D000026 ORTHO05D000094 1.3e-07 60.1 77 48.1
BcaC04g19674 Brassica carinata HOM05D000026 ORTHO05D021864 1.7e-07 59.7 78 43.6
C09p52770 Brassica napus HOM05D000026 ORTHO05D021864 1.7e-07 59.7 78 43.6
AT3G45420 Arabidopsis thaliana HOM05D000026 ORTHO05D000094 2.9e-07 58.9 57 54.4
CARHR273960 Cardamine hirsuta HOM05D000026 ORTHO05D000094 5.0e-07 58.2 73 46.6
BcaB05g22630 Brassica carinata HOM05D000026 ORTHO05D000094 6.6e-07 57.8 77 45.5
BcaC04g19676 Brassica carinata HOM05D000026 ORTHO05D000094 1.1e-06 57.0 78 42.3
A10p17420 Brassica napus HOM05D000026 ORTHO05D000094 1.5e-06 56.6 78 41.0
CARHR150350 Cardamine hirsuta HOM05D000026 ORTHO05D000094 3.3e-06 55.5 61 55.7
Aa31LG4G14670 Aethionema arabicum HOM05D000026 ORTHO05D000094 4.2e-06 55.1 79 45.6
BcaB02g10740 Brassica carinata HOM05D000026 ORTHO05D000094 4.2e-06 55.1 80 42.5


User provided reference genes

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