Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22571 Brassica carinata HOM05D000139 ORTHO05D094402 1.0e-57 226.5 114 100.0
BcaB05g22536 Brassica carinata HOM05D000139 ORTHO05D000103 2.1e-21 105.9 58 93.1
Sp6g21400 Schrenkiella parvula HOM05D000139 ORTHO05D000103 6.6e-20 100.9 63 85.7
BcaB01g04557 Brassica carinata HOM05D000139 ORTHO05D000103 8.7e-20 100.5 60 88.3
A02p06920 Brassica napus HOM05D000139 ORTHO05D000103 1.1e-19 100.1 58 87.9
BraA02t05772Z Brassica rapa HOM05D000139 ORTHO05D000103 1.1e-19 100.1 58 87.9
Thhalv10016083m.g Eutrema salsugineum HOM05D000139 ORTHO05D000103 1.5e-19 99.8 62 90.3
BcaC03g13988 Brassica carinata HOM05D000139 ORTHO05D000103 1.9e-19 99.4 58 91.4
C02p12220 Brassica napus HOM05D000139 ORTHO05D000103 1.9e-19 99.4 58 91.4
BolC2t07324H Brassica oleracea HOM05D000139 ORTHO05D000103 1.9e-19 99.4 58 91.4
AT5G59730 Arabidopsis thaliana HOM05D000139 ORTHO05D000103 2.5e-19 99.0 61 86.9
AL8G36250 Arabidopsis lyrata HOM05D000139 ORTHO05D000103 4.3e-19 98.2 61 86.9
BolC9t58088H Brassica oleracea HOM05D000139 ORTHO05D000103 9.6e-19 97.1 58 87.9
BcaB08g36224 Brassica carinata HOM05D000139 ORTHO05D000103 1.3e-18 96.7 59 86.4
CARHR273310 Cardamine hirsuta HOM05D000139 ORTHO05D000103 2.8e-18 95.5 61 83.6
BcaC04g19624 Brassica carinata HOM05D000139 ORTHO05D000103 3.6e-18 95.1 58 86.2
C09p52210 Brassica napus HOM05D000139 ORTHO05D000103 3.6e-18 95.1 58 86.2
A10p16960 Brassica napus HOM05D000139 ORTHO05D000103 8.1e-18 94.0 58 86.2
BraA10t43780Z Brassica rapa HOM05D000139 ORTHO05D000103 8.1e-18 94.0 58 86.2
BcaNung07326 Brassica carinata HOM05D000139 ORTHO05D000103 5.3e-17 91.3 60 83.3
BolC3t13795H Brassica oleracea HOM05D000139 ORTHO05D000103 5.3e-17 91.3 60 83.3
BraA03t10465Z Brassica rapa HOM05D000139 ORTHO05D000103 5.3e-17 91.3 60 83.3
A03p11510 Brassica napus HOM05D000139 ORTHO05D000103 1.5e-16 89.7 60 81.7
Carub.0008s2037 Capsella rubella HOM05D000139 ORTHO05D000103 1.5e-16 89.7 68 72.1
C03p13330 Brassica napus HOM05D000139 ORTHO05D000103 9.9e-16 87.0 60 80.0
Aa31sc23G220 Aethionema arabicum HOM05D000139 ORTHO05D000103 2.7e-13 79.0 64 67.2


User provided reference genes

Program Settings