Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22558 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 1183.3 591 100.0
BcaB06g26290 Brassica carinata HOM05D004375 ORTHO05D008558 1.5e-240 836.3 674 68.8
BcaB07g32629 Brassica carinata HOM05D004375 ORTHO05D008558 6.1e-218 761.1 661 64.6
BcaB05g23104 Brassica carinata HOM05D004375 ORTHO05D008558 2.9e-207 725.7 717 59.4
BcaB01g03719 Brassica carinata HOM05D004375 ORTHO05D008558 9.6e-171 604.4 677 55.4
BcaB05g21909 Brassica carinata HOM05D004375 ORTHO05D008558 2.6e-168 596.3 562 61.6
BcaB05g21622 Brassica carinata HOM05D004375 ORTHO05D008558 2.8e-162 576.2 528 63.4
BcaB07g32718 Brassica carinata HOM05D004375 ORTHO05D008558 2.7e-133 479.9 603 49.1
BcaB02g10241 Brassica carinata HOM05D004375 ORTHO05D008558 1.8e-121 440.7 704 43.0
BcaB05g24722 Brassica carinata HOM05D004375 ORTHO05D091882 2.2e-119 433.7 401 62.8
BcaC04g21457 Brassica carinata HOM05D004375 ORTHO05D008558 2.7e-88 330.5 721 35.5
C09p31560 Brassica napus HOM05D004375 ORTHO05D008558 6.6e-87 325.9 676 37.4
BolC9t56012H Brassica oleracea HOM05D004375 ORTHO05D008558 2.5e-86 323.9 676 37.1
BcaC04g23067 Brassica carinata HOM05D004375 ORTHO05D008558 5.2e-84 316.2 689 34.7
BcaB05g23866 Brassica carinata HOM05D004375 ORTHO05D008558 3.4e-83 313.5 680 37.1
C02p27470 Brassica napus HOM05D004375 ORTHO05D008558 7.5e-83 312.4 651 36.4
BcaC03g15172 Brassica carinata HOM05D004375 ORTHO05D008558 2.4e-73 280.8 579 36.6
C06p12490 Brassica napus HOM05D004375 ORTHO05D008558 5.4e-73 279.6 681 34.2
BcaC03g15201 Brassica carinata HOM05D004375 ORTHO05D008558 2.3e-71 274.2 660 33.9
C02p28420 Brassica napus HOM05D004375 ORTHO05D008558 5.1e-71 273.1 657 32.7
C02p27860 Brassica napus HOM05D004375 ORTHO05D008558 1.9e-70 271.2 648 33.8
C07p19300 Brassica napus HOM05D004375 ORTHO05D008558 4.3e-70 270.0 671 32.3
BolC2t08831H Brassica oleracea HOM05D004375 ORTHO05D008558 1.2e-69 268.5 655 33.3
BcaB05g23011 Brassica carinata HOM05D004375 ORTHO05D008558 7.8e-64 249.2 606 34.8
BcaC04g20927 Brassica carinata HOM05D004375 ORTHO05D031763 1.7e-63 248.1 609 34.8
A02p20030 Brassica napus HOM05D004375 ORTHO05D008558 4.3e-62 243.4 216 50.5
BcaB07g33031 Brassica carinata HOM05D004375 ORTHO05D008558 7.3e-62 242.7 680 32.2
A05p27930 Brassica napus HOM05D004375 ORTHO05D008558 1.6e-61 241.5 216 50.5
BolC9t56614H Brassica oleracea HOM05D004375 ORTHO05D031763 2.1e-61 241.1 647 34.0
A03p68120 Brassica napus HOM05D004375 ORTHO05D008558 2.8e-61 240.7 215 51.2
BcaC06g35536 Brassica carinata HOM05D004375 ORTHO05D008558 4.7e-61 240.0 667 30.6
C01p14310 Brassica napus HOM05D004375 ORTHO05D008558 4.0e-60 236.9 217 50.7
A01p20690 Brassica napus HOM05D004375 ORTHO05D008558 5.2e-60 236.5 210 50.5
A02p26110 Brassica napus HOM05D004375 ORTHO05D008558 1.7e-58 231.5 631 30.6
BcaC03g15251 Brassica carinata HOM05D004375 ORTHO05D008558 1.1e-57 228.8 636 32.5
BcaB07g32958 Brassica carinata HOM05D004375 ORTHO05D008558 2.4e-57 227.6 561 34.9
BcaC02g09621 Brassica carinata HOM05D004375 ORTHO05D008558 1.2e-56 225.3 664 33.3
BcaB04g17136 Brassica carinata HOM05D004375 ORTHO05D008558 2.7e-56 224.2 484 35.7
A09p17280 Brassica napus HOM05D004375 ORTHO05D008558 1.3e-55 221.9 627 30.6
BcaB05g23703 Brassica carinata HOM05D004375 ORTHO05D008558 2.5e-54 217.6 675 31.3
BcaB02g10812 Brassica carinata HOM05D004375 ORTHO05D008558 4.3e-54 216.9 647 30.9
BcaC02g10128 Brassica carinata HOM05D004375 ORTHO05D008558 6.2e-53 213.0 632 31.8
BcaB05g23325 Brassica carinata HOM05D004375 ORTHO05D008558 1.1e-52 212.2 215 49.3
BcaB01g03503 Brassica carinata HOM05D004375 ORTHO05D008558 1.7e-50 204.9 693 30.9
BcaB08g35442 Brassica carinata HOM05D004375 ORTHO05D008558 2.4e-49 201.1 215 47.9
C01p28010 Brassica napus HOM05D004375 ORTHO05D008558 2.7e-48 197.6 347 34.6
BcaB03g15947 Brassica carinata HOM05D004375 ORTHO05D008558 7.9e-48 196.1 598 30.1
BcaC03g15253 Brassica carinata HOM05D004375 ORTHO05D008558 5.1e-47 193.4 279 38.4
BcaB02g06988 Brassica carinata HOM05D004375 ORTHO05D008558 5.3e-44 183.3 293 39.6
BcaB06g28882 Brassica carinata HOM05D004375 ORTHO05D008558 2.0e-43 181.4 198 45.5
BcaC09g49739 Brassica carinata HOM05D004375 ORTHO05D008558 3.4e-43 180.6 226 42.9
BraA06t26008Z Brassica rapa HOM05D004375 ORTHO05D008558 2.2e-42 177.9 245 39.2
BraA07t28625Z Brassica rapa HOM05D004375 ORTHO05D008558 1.0e-39 169.1 669 28.7
BcaB02g09193 Brassica carinata HOM05D004375 ORTHO05D008558 3.7e-37 160.6 218 41.7
BcaB05g24368 Brassica carinata HOM05D004375 ORTHO05D008558 1.7e-34 151.8 126 57.1
BcaB01g04420 Brassica carinata HOM05D004375 ORTHO05D008558 2.9e-34 151.0 630 29.0
BraA09t39239Z Brassica rapa HOM05D004375 ORTHO05D008558 2.9e-34 151.0 677 26.7
A10p10580 Brassica napus HOM05D004375 ORTHO05D008558 1.4e-33 148.7 583 27.1
BolC1t03873H Brassica oleracea HOM05D004375 ORTHO05D008558 1.9e-30 138.3 116 52.6
BolC2t08886H Brassica oleracea HOM05D004375 ORTHO05D008558 9.6e-30 136.0 612 27.1
C01p25780 Brassica napus HOM05D004375 ORTHO05D008558 1.4e-28 132.1 113 58.4
BcaB07g32109 Brassica carinata HOM05D004375 ORTHO05D008558 4.1e-28 130.6 72 91.7
BcaC01g06196 Brassica carinata HOM05D004375 ORTHO05D008558 1.1e-25 122.5 619 27.0
A07p43390 Brassica napus HOM05D004375 ORTHO05D008558 3.2e-25 120.9 620 23.9
A09p37300 Brassica napus HOM05D004375 ORTHO05D008558 3.0e-23 114.4 550 26.5
C01p25790 Brassica napus HOM05D004375 ORTHO05D008558 2.5e-22 111.3 546 25.5
C01p39240 Brassica napus HOM05D004375 ORTHO05D008558 2.5e-22 111.3 96 51.0
C09p37810 Brassica napus HOM05D004375 ORTHO05D031763 7.4e-22 109.8 268 35.1
A05p24130 Brassica napus HOM05D004375 ORTHO05D008558 9.7e-22 109.4 215 32.6
BolC1t02734H Brassica oleracea HOM05D004375 ORTHO05D008558 2.8e-21 107.8 110 47.3
BolC3t21361H Brassica oleracea HOM05D004375 ORTHO05D008558 1.8e-20 105.1 506 27.7
BraA03t15607Z Brassica rapa HOM05D004375 ORTHO05D008558 9.1e-20 102.8 110 46.4
BraA09t39238Z Brassica rapa HOM05D004375 ORTHO05D008558 1.3e-18 99.0 435 26.4
BcaB07g32586 Brassica carinata HOM05D004375 ORTHO05D016090 2.5e-17 94.7 210 30.5
BolC4t24807H Brassica oleracea HOM05D004375 ORTHO05D008558 7.9e-16 89.7 66 71.2
BolC9t54141H Brassica oleracea HOM05D004375 ORTHO05D008558 3.0e-15 87.8 61 73.8
C03p10830 Brassica napus HOM05D004375 ORTHO05D008558 3.3e-14 84.3 545 25.3
BolC3t21360H Brassica oleracea HOM05D004375 ORTHO05D008558 1.7e-13 82.0 66 57.6
A09p37230 Brassica napus HOM05D004375 ORTHO05D008558 2.2e-13 81.6 458 24.0
C01p30040 Brassica napus HOM05D004375 ORTHO05D016090 2.2e-13 81.6 178 30.9
BolC1t02944H Brassica oleracea HOM05D004375 ORTHO05D016090 2.2e-13 81.6 178 30.9
BcaC09g51321 Brassica carinata HOM05D004375 ORTHO05D008558 9.1e-12 76.3 68 47.1
Carub.0009s0004 Capsella rubella HOM05D000675 ORTHO05D000395 1.7e-10 72.0 183 27.3
BolC7t41868H Brassica oleracea HOM05D004375 ORTHO05D008558 3.8e-10 70.9 461 25.8
A10p33190 Brassica napus HOM05D004375 ORTHO05D008558 1.1e-09 69.3 61 45.9
BolC1t02527H Brassica oleracea HOM05D004375 ORTHO05D008558 1.4e-09 68.9 56 62.5
SpUn1480_0010 Schrenkiella parvula HOM05D004375 ORTHO05D008558 1.4e-09 68.9 86 36.0
C02p50680 Brassica napus HOM05D004375 ORTHO05D008558 4.2e-09 67.4 277 28.9
BraA05t20802Z Brassica rapa HOM05D004375 ORTHO05D008558 4.2e-09 67.4 54 61.1
C01p14320 Brassica napus HOM05D004375 ORTHO05D008558 7.2e-09 66.6 137 38.0
Carub.0001s3338 Capsella rubella HOM05D000675 ORTHO05D000395 9.4e-09 66.2 170 26.5
Carub.0029s0003 Capsella rubella HOM05D000675 ORTHO05D000395 2.7e-08 64.7 194 27.8
Aa31LG10G13150 Aethionema arabicum HOM05D000471 ORTHO05D000199 3.6e-08 64.3 135 30.4
BcaC03g14687 Brassica carinata HOM05D004375 ORTHO05D008558 6.1e-08 63.5 406 24.6
Aa31LG1G3610 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.4e-07 62.4 135 29.6
Aa31LG2G16260 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.4e-07 62.4 135 29.6
Aa31LG6G12780 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.4e-07 62.4 135 29.6
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 1.8e-07 62.0 155 31.0
Aa31LG9G6340 Aethionema arabicum HOM05D000471 ORTHO05D000199 2.3e-07 61.6 135 29.6
C02p54980 Brassica napus HOM05D000675 ORTHO05D003044 5.2e-07 60.5 173 27.7
Carub.0004s0647 Capsella rubella HOM05D000675 ORTHO05D000395 5.2e-07 60.5 170 27.6
AL4G19890 Arabidopsis lyrata HOM05D000675 ORTHO05D003044 8.8e-07 59.7 137 26.3
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 8.8e-07 59.7 183 26.2
BcaC01g04978 Brassica carinata HOM05D001038 ORTHO05D010946 2.0e-06 58.5 188 25.0
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-06 58.2 159 28.9
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 2.6e-06 58.2 188 25.0
SpUn0365_0010 Schrenkiella parvula HOM05D011363 ORTHO05D003044 2.6e-06 58.2 165 24.8
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 3.3e-06 57.8 149 26.8
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 3.3e-06 57.8 122 28.7
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 3.3e-06 57.8 149 26.8
BolC2t11150H Brassica oleracea HOM05D004375 ORTHO05D106812 3.3e-06 57.8 108 35.2
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 3.3e-06 57.8 149 26.8
BraA04t17363Z Brassica rapa HOM05D000675 ORTHO05D003044 3.3e-06 57.8 122 29.5
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 3.3e-06 57.8 122 28.7
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 3.3e-06 57.8 161 24.2
C03p31470 Brassica napus HOM05D001038 ORTHO05D010946 4.4e-06 57.4 188 25.0
C03p78170 Brassica napus HOM05D000675 ORTHO05D003044 7.4e-06 56.6 226 24.3
A01p24790 Brassica napus HOM05D000675 ORTHO05D011634 9.7e-06 56.2 187 26.2
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 9.7e-06 56.2 148 25.7


User provided reference genes

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