Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22554 Brassica carinata HOM05D008816 ORTHO05D011113 8.1e-18 92.8 51 100.0
BcaB07g32150 Brassica carinata HOM05D008816 ORTHO05D011113 2.6e-16 87.8 49 98.0
A06p17580 Brassica napus HOM05D008816 ORTHO05D011113 5.8e-16 86.7 49 95.9
BraA06t24853Z Brassica rapa HOM05D008816 ORTHO05D011113 5.8e-16 86.7 49 95.9
BcaC05g26064 Brassica carinata HOM05D008816 ORTHO05D011113 9.9e-16 85.9 49 95.9
C05p20480 Brassica napus HOM05D008816 ORTHO05D011113 9.9e-16 85.9 49 95.9
BolC5t30746H Brassica oleracea HOM05D008816 ORTHO05D011113 9.9e-16 85.9 49 95.9
C08p20900 Brassica napus HOM05D008816 ORTHO05D011113 9.2e-14 79.3 47 91.5
BolC8t49728H Brassica oleracea HOM05D008816 ORTHO05D011113 9.2e-14 79.3 47 91.5
Sp1g19060 Schrenkiella parvula HOM05D008816 ORTHO05D011113 4.6e-13 77.0 50 84.0
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 6.0e-13 76.6 47 89.4
BraA08t34824Z Brassica rapa HOM05D008816 ORTHO05D011113 6.0e-13 76.6 47 89.4
BcaC07g39105 Brassica carinata HOM05D008816 ORTHO05D011113 1.0e-12 75.9 47 87.2
C08p20880 Brassica napus HOM05D008816 ORTHO05D011113 1.0e-12 75.9 47 87.2
BolC8t49726H Brassica oleracea HOM05D008816 ORTHO05D011113 1.0e-12 75.9 47 87.2
BraA08t34825Z Brassica rapa HOM05D008816 ORTHO05D011113 1.7e-12 75.1 47 87.2
BraA07t29249Z Brassica rapa HOM05D008816 ORTHO05D011113 2.3e-12 74.7 50 82.0
BcaB03g12813 Brassica carinata HOM05D008816 ORTHO05D011113 3.9e-12 73.9 47 85.1
C07p22060 Brassica napus HOM05D008816 ORTHO05D011113 6.6e-12 73.2 47 85.1
A07p15070 Brassica napus HOM05D008816 ORTHO05D011113 2.5e-11 71.2 50 80.0
Carub.0001s2095 Capsella rubella HOM05D008816 ORTHO05D011113 3.3e-11 70.9 50 74.0
BcaC06g34859 Brassica carinata HOM05D008816 ORTHO05D011113 4.3e-11 70.5 50 76.0
C07p22160 Brassica napus HOM05D008816 ORTHO05D011113 4.3e-11 70.5 50 76.0
BolC7t42783H Brassica oleracea HOM05D008816 ORTHO05D011113 4.3e-11 70.5 50 76.0
BcaC05g26063 Brassica carinata HOM05D008816 ORTHO05D032745 5.6e-11 70.1 50 74.0
C05p20460 Brassica napus HOM05D008816 ORTHO05D032745 5.6e-11 70.1 50 74.0
BolC5t30739H Brassica oleracea HOM05D008816 ORTHO05D032745 5.6e-11 70.1 50 74.0
AL1G34670 Arabidopsis lyrata HOM05D008816 ORTHO05D011113 9.6e-11 69.3 50 72.0
BcaC06g34895 Brassica carinata HOM05D008816 ORTHO05D011113 1.3e-10 68.9 47 80.9
BolC7t42736H Brassica oleracea HOM05D008816 ORTHO05D011113 1.3e-10 68.9 47 80.9
BcaB03g14265 Brassica carinata HOM05D008816 ORTHO05D011113 1.6e-10 68.6 50 72.0
Sp1g19050 Schrenkiella parvula HOM05D008816 ORTHO05D011113 3.6e-10 67.4 50 70.0
A07p15090 Brassica napus HOM05D008816 ORTHO05D011113 8.1e-10 66.2 50 70.0
BraA07t29250Z Brassica rapa HOM05D008816 ORTHO05D011113 8.1e-10 66.2 50 70.0
BcaB03g14263 Brassica carinata HOM05D008816 ORTHO05D011113 6.9e-09 63.2 47 76.6
BcaB05g22551 Brassica carinata HOM05D008816 ORTHO05D011113 9.0e-09 62.8 50 70.0
BcaB07g32149 Brassica carinata HOM05D008816 ORTHO05D011113 3.4e-08 60.8 50 68.0
A06p17570 Brassica napus HOM05D008816 ORTHO05D011113 3.4e-08 60.8 48 68.8
BraA06t24852Z Brassica rapa HOM05D008816 ORTHO05D011113 3.4e-08 60.8 48 68.8
AL1G34680 Arabidopsis lyrata HOM05D008816 ORTHO05D011113 1.7e-07 58.5 50 64.0
Carub.0001s2096 Capsella rubella HOM05D008816 ORTHO05D011113 4.2e-06 53.9 47 66.0


User provided reference genes

Program Settings