Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22539 Brassica carinata HOM05D000036 ORTHO05D093201 4.5e-39 164.1 81 100.0
BcaB07g32309 Brassica carinata HOM05D000036 ORTHO05D000095 7.5e-26 120.2 64 93.8
BolC5t30939H Brassica oleracea HOM05D000036 ORTHO05D000095 8.3e-25 116.7 64 90.6
Sp1g20660 Schrenkiella parvula HOM05D000036 ORTHO05D000095 1.4e-24 115.9 64 90.6
C05p22400 Brassica napus HOM05D000036 ORTHO05D000095 1.8e-24 115.5 64 89.1
A09p41570 Brassica napus HOM05D000036 ORTHO05D000095 2.4e-24 115.2 64 89.1
BraA09t39648Z Brassica rapa HOM05D000036 ORTHO05D000095 2.4e-24 115.2 64 89.1
BcaC05g26227 Brassica carinata HOM05D000036 ORTHO05D000095 4.1e-24 114.4 64 89.1
AL1G36870 Arabidopsis lyrata HOM05D000036 ORTHO05D000095 5.6e-21 104.0 64 79.7
AT1G23200 Arabidopsis thaliana HOM05D000036 ORTHO05D000095 9.5e-21 103.2 64 79.7
Thhalv10007274m.g Eutrema salsugineum HOM05D000036 ORTHO05D000095 4.7e-20 100.9 65 80.0
CARHR023650 Cardamine hirsuta HOM05D000036 ORTHO05D000095 6.2e-20 100.5 64 79.7
Carub.0001s2277 Capsella rubella HOM05D000036 ORTHO05D000095 2.6e-18 95.1 64 76.6
Aa31LG7G7210 Aethionema arabicum HOM05D000036 ORTHO05D000095 3.9e-14 81.3 66 66.7
THA.LOC104822996 Tarenaya hassleriana HOM05D000036 ORTHO05D000095 3.0e-06 55.1 64 54.7
PGR102G1565 Punica granatum HOM05D000036 ORTHO05D000095 3.9e-06 54.7 64 53.1
QL03p034052 Quercus lobata HOM05D000036 ORTHO05D000095 5.1e-06 54.3 64 51.6
Medtr8g104580 Medicago truncatula HOM05D000036 ORTHO05D000095 8.6e-06 53.5 52 51.9
Medtr8g104655 Medicago truncatula HOM05D000036 ORTHO05D000095 8.6e-06 53.5 52 51.9


User provided reference genes

Program Settings