Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22538 Brassica carinata HOM05D000036 ORTHO05D026807 4.0e-38 161.0 84 100.0
BcaB07g32309 Brassica carinata HOM05D000036 ORTHO05D000095 3.4e-29 131.3 82 84.1
BraA09t39648Z Brassica rapa HOM05D000036 ORTHO05D000095 7.0e-27 123.6 86 77.9
Sp1g20660 Schrenkiella parvula HOM05D000036 ORTHO05D000095 7.0e-27 123.6 84 78.6
BcaC05g26227 Brassica carinata HOM05D000036 ORTHO05D000095 9.2e-27 123.2 86 77.9
BolC5t30939H Brassica oleracea HOM05D000036 ORTHO05D000095 9.2e-27 123.2 86 77.9
C05p22400 Brassica napus HOM05D000036 ORTHO05D000095 1.6e-26 122.5 86 77.9
A09p41570 Brassica napus HOM05D000036 ORTHO05D000095 2.7e-26 121.7 86 76.7
AT1G23200 Arabidopsis thaliana HOM05D000036 ORTHO05D000095 6.2e-23 110.5 87 71.3
Thhalv10007274m.g Eutrema salsugineum HOM05D000036 ORTHO05D000095 1.8e-22 109.0 86 72.1
Carub.0001s2277 Capsella rubella HOM05D000036 ORTHO05D000095 6.8e-22 107.1 85 65.9
AL1G36870 Arabidopsis lyrata HOM05D000036 ORTHO05D000095 4.4e-21 104.4 85 68.2
CARHR023650 Cardamine hirsuta HOM05D000036 ORTHO05D000095 8.3e-20 100.1 87 65.5
THA.LOC104822996 Tarenaya hassleriana HOM05D000036 ORTHO05D000095 3.2e-19 98.2 82 64.6
Aa31LG7G7210 Aethionema arabicum HOM05D000036 ORTHO05D000095 1.0e-17 93.2 100 57.0
BcaB05g22540 Brassica carinata HOM05D000036 ORTHO05D026807 1.6e-10 69.3 36 88.9
MBI13_g32062_MAGBIO Magnolia biondii HOM05D000036 ORTHO05D000095 5.1e-09 64.3 81 48.1
AL3G37600 Arabidopsis lyrata HOM05D000036 ORTHO05D026807 1.1e-08 63.2 46 69.6
TAR622G0595 Trochodendron aralioides HOM05D000036 ORTHO05D000095 2.5e-08 62.0 83 43.4
Nn4g24284 Nelumbo nucifera HOM05D000036 ORTHO05D000095 4.3e-08 61.2 83 43.4
TAR371G0191 Trochodendron aralioides HOM05D000036 ORTHO05D000095 4.3e-08 61.2 83 47.0
Nn4g24271 Nelumbo nucifera HOM05D000036 ORTHO05D000095 6.2e-07 57.4 83 41.0
Nn4g24270 Nelumbo nucifera HOM05D000036 ORTHO05D000095 8.1e-07 57.0 83 41.0
Gohir.D02G142600 Gossypium hirsutum HOM05D000036 ORTHO05D000095 4.0e-06 54.7 81 42.0
Gorai.005G160000 Gossypium raimondii HOM05D000036 ORTHO05D000095 4.0e-06 54.7 81 42.0
Nn4g24273 Nelumbo nucifera HOM05D000036 ORTHO05D000095 4.0e-06 54.7 83 38.6
PSO135G0912 Papaver somniferum HOM05D000036 ORTHO05D000095 5.2e-06 54.3 82 45.1
Gohir.A03G119200 Gossypium hirsutum HOM05D000036 ORTHO05D000095 6.9e-06 53.9 81 42.0
RcHm_v2.0_Chr4g0409791 Rosa chinensis HOM05D000036 ORTHO05D000095 6.9e-06 53.9 88 38.6
PSO135G0226 Papaver somniferum HOM05D000036 ORTHO05D000095 9.0e-06 53.5 82 45.1


User provided reference genes

Program Settings