Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22473 Brassica carinata HOM05D007865 ORTHO05D010123 3.4e-143 511.9 309 100.0
BcaB05g22474 Brassica carinata HOM05D007865 ORTHO05D010123 1.0e-115 420.6 459 56.6
BcaC03g14047 Brassica carinata HOM05D007865 ORTHO05D010123 1.0e-107 394.0 309 71.2
BolC2t07384H Brassica oleracea HOM05D007865 ORTHO05D010123 1.3e-107 393.7 309 71.2
A02p07380 Brassica napus HOM05D007865 ORTHO05D010123 6.7e-107 391.3 309 70.9
BraA02t05817Z Brassica rapa HOM05D007865 ORTHO05D010123 6.7e-107 391.3 309 70.9
BcaC03g14051 Brassica carinata HOM05D007865 ORTHO05D010123 2.5e-106 389.4 309 70.6
BcaC03g14053 Brassica carinata HOM05D007865 ORTHO05D010123 4.3e-106 388.7 309 71.2
BolC2t07395H Brassica oleracea HOM05D007865 ORTHO05D010123 4.3e-106 388.7 309 71.2
C02p12860 Brassica napus HOM05D007865 ORTHO05D010123 1.6e-105 386.7 309 70.9
A02p07230 Brassica napus HOM05D007865 ORTHO05D010123 9.0e-104 380.9 307 70.7
BraA02t05804Z Brassica rapa HOM05D007865 ORTHO05D010123 1.5e-103 380.2 307 70.7
BcaC03g14044 Brassica carinata HOM05D007865 ORTHO05D010123 3.4e-103 379.0 310 70.0
BolC2t07386H Brassica oleracea HOM05D007865 ORTHO05D010123 3.4e-103 379.0 310 70.0
A02p07240 Brassica napus HOM05D007865 ORTHO05D010123 1.0e-102 377.5 307 70.4
A02p07250 Brassica napus HOM05D007865 ORTHO05D010123 1.0e-102 377.5 307 70.0
BraA02t05803Z Brassica rapa HOM05D007865 ORTHO05D010123 4.9e-102 375.2 307 69.7
BolC2t07382H Brassica oleracea HOM05D007865 ORTHO05D010123 1.4e-101 373.6 309 69.3
BcaC03g14042 Brassica carinata HOM05D007865 ORTHO05D010123 6.0e-100 368.2 309 68.6
C02p12890 Brassica napus HOM05D007865 ORTHO05D010123 4.3e-98 362.1 312 67.3
BraA02t05802Z Brassica rapa HOM05D007865 ORTHO05D010123 7.4e-98 361.3 293 70.6
C02p12920 Brassica napus HOM05D007865 ORTHO05D010123 6.5e-94 348.2 308 65.9
BcaC03g14023 Brassica carinata HOM05D007865 ORTHO05D010123 6.9e-88 328.2 310 62.9
C02p12610 Brassica napus HOM05D007865 ORTHO05D010123 3.6e-84 315.8 243 67.9
BolC2t07397H Brassica oleracea HOM05D007865 ORTHO05D010123 6.1e-84 315.1 243 69.1
BcaB05g22471 Brassica carinata HOM05D007865 ORTHO05D010123 1.9e-77 293.5 326 56.7
BolC2t07361H Brassica oleracea HOM05D007865 ORTHO05D010123 1.0e-75 287.7 245 69.4
C02p12900 Brassica napus HOM05D007865 ORTHO05D010123 3.8e-70 269.2 181 82.3
C02p12910 Brassica napus HOM05D007865 ORTHO05D010123 1.8e-56 223.8 153 81.7
BcaC03g14024 Brassica carinata HOM05D007865 ORTHO05D010123 3.1e-56 223.0 150 82.7
BolC2t07362H Brassica oleracea HOM05D007865 ORTHO05D010123 3.1e-56 223.0 150 82.7
BcaB08g36307 Brassica carinata HOM05D007865 ORTHO05D010123 4.3e-37 159.5 273 41.4
BolC9t57977H Brassica oleracea HOM05D007865 ORTHO05D010123 1.6e-36 157.5 240 42.5
BcaB01g02171 Brassica carinata HOM05D007865 ORTHO05D010123 2.8e-36 156.8 273 42.1
A10p15310 Brassica napus HOM05D007865 ORTHO05D010123 4.7e-36 156.0 240 42.5
BraA10t43702Z Brassica rapa HOM05D007865 ORTHO05D010123 3.1e-35 153.3 240 41.2
Thhalv10015599m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 3.1e-35 153.3 281 40.2
C09p51140 Brassica napus HOM05D007865 ORTHO05D010123 4.0e-35 152.9 240 42.5
A10p15300 Brassica napus HOM05D007865 ORTHO05D010123 8.9e-35 151.8 240 40.8
Thhalv10015750m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 9.8e-34 148.3 180 49.4
BcaB05g22499 Brassica carinata HOM05D007865 ORTHO05D010123 9.2e-32 141.7 133 60.9
BcaC03g14025 Brassica carinata HOM05D007865 ORTHO05D010123 1.2e-31 141.4 90 75.6
C09p51150 Brassica napus HOM05D007865 ORTHO05D010123 1.2e-31 141.4 114 62.3
AL4G20480 Arabidopsis lyrata HOM05D014137 ORTHO05D010123 2.0e-31 140.6 197 43.7
AL4G20500 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 3.5e-31 139.8 196 42.9
CARHR273100 Cardamine hirsuta HOM05D007865 ORTHO05D010123 1.3e-30 137.9 315 35.9
AL8G35160 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 1.7e-30 137.5 241 37.3
AL8G35690 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 4.7e-28 129.4 175 44.0
Thhalv10015349m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.4e-27 127.9 243 38.3
BcaB03g13835 Brassica carinata HOM05D007865 ORTHO05D010123 4.0e-27 126.3 163 48.5
Thhalv10015954m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.5e-26 124.4 164 46.3
BolC9t57975H Brassica oleracea HOM05D007865 ORTHO05D010123 1.3e-25 121.3 240 37.5
BraA10t43701Z Brassica rapa HOM05D007865 ORTHO05D010123 6.0e-23 112.5 238 37.0
Carub.0008s1968 Capsella rubella HOM05D007865 ORTHO05D010123 7.8e-23 112.1 180 39.4
Carub.0008s1992 Capsella rubella HOM05D007865 ORTHO05D010123 7.8e-23 112.1 180 39.4
Thhalv10028345m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.3e-22 111.3 178 39.9
Thhalv10028104m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 9.5e-21 105.1 184 38.0
BolC2t07398H Brassica oleracea HOM05D007865 ORTHO05D010123 5.8e-18 95.9 100 66.0
AL8G35420 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 2.2e-17 94.0 237 31.2
BolC2t07399H Brassica oleracea HOM05D007865 ORTHO05D010123 1.4e-16 91.3 105 48.6
AT3G46565 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 7.1e-16 89.0 85 51.8
SpUn1022_0010 Schrenkiella parvula HOM05D007865 ORTHO05D010123 1.5e-13 81.3 56 69.6
AT1G35890 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 1.9e-13 80.9 70 57.1
BcaB05g22472 Brassica carinata HOM05D007865 ORTHO05D010123 2.1e-12 77.4 51 74.5
Thhalv10009374m.g Eutrema salsugineum HOM05D009272 ORTHO05D010513 1.1e-11 75.1 107 39.3
Carub.0006s1626 Capsella rubella HOM05D007865 ORTHO05D010123 1.4e-11 74.7 110 40.9
BcaB02g07852 Brassica carinata HOM05D009350 ORTHO05D010513 8.9e-11 72.0 149 34.2
Carub.0001s0263 Capsella rubella HOM05D007865 ORTHO05D010513 8.9e-11 72.0 90 43.3
CARHR249930 Cardamine hirsuta HOM05D009056 ORTHO05D011508 2.6e-10 70.5 138 35.5
THA.LOC104806001 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 9.9e-10 68.6 182 27.5
THA.LOC104806002 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 9.9e-10 68.6 182 27.5
THA.LOC104818129 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 1.3e-09 68.2 182 27.5
BcaB05g22500 Brassica carinata HOM05D007865 ORTHO05D010123 2.2e-09 67.4 68 54.4
C05p01970 Brassica napus HOM05D009272 ORTHO05D015471 2.2e-09 67.4 128 34.4
C05p02270 Brassica napus HOM05D009272 ORTHO05D015471 2.2e-09 67.4 128 34.4
BolC5t29005H Brassica oleracea HOM05D009272 ORTHO05D015471 4.9e-09 66.2 113 37.2
THA.LOC104813384 Tarenaya hassleriana HOM05D007865 ORTHO05D010123 8.4e-09 65.5 135 33.3
BcaC05g24525 Brassica carinata HOM05D009272 ORTHO05D015471 1.1e-08 65.1 113 36.3
BolC5t28976H Brassica oleracea HOM05D009272 ORTHO05D015471 1.1e-08 65.1 113 36.3
A10p02020 Brassica napus HOM05D009272 ORTHO05D015471 1.4e-08 64.7 113 36.3
BraA10t42475Z Brassica rapa HOM05D009272 ORTHO05D015471 1.4e-08 64.7 113 36.3
A10p02460 Brassica napus HOM05D009272 ORTHO05D015471 1.9e-08 64.3 128 33.6
AL6G29200 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 5.4e-08 62.8 147 33.3
CARHR289550 Cardamine hirsuta HOM05D009350 ORTHO05D010513 7.1e-08 62.4 116 37.1
Thhalv10017056m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 7.1e-08 62.4 88 38.6
Thhalv10017700m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 7.1e-08 62.4 88 38.6
Thhalv10017733m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 7.1e-08 62.4 88 38.6
BcaB02g06921 Brassica carinata HOM05D009272 ORTHO05D015471 9.3e-08 62.0 130 33.1
BcaB02g06922 Brassica carinata HOM05D009272 ORTHO05D015471 9.3e-08 62.0 130 33.1
BcaB02g06923 Brassica carinata HOM05D009272 ORTHO05D010123 9.3e-08 62.0 130 33.1
BcaB02g06925 Brassica carinata HOM05D009272 ORTHO05D015471 9.3e-08 62.0 130 33.1
BcaB02g06924 Brassica carinata HOM05D009272 ORTHO05D010513 1.2e-07 61.6 116 34.5
AT1G03490 Arabidopsis thaliana HOM05D009272 ORTHO05D010513 1.6e-07 61.2 88 38.6
AL1G12990 Arabidopsis lyrata HOM05D009272 ORTHO05D010513 2.7e-07 60.5 122 35.2
AL1G13550 Arabidopsis lyrata HOM05D009272 ORTHO05D010513 2.7e-07 60.5 122 35.2
AT5G18300 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 2.7e-07 60.5 126 33.3
Thhalv10029188m.g Eutrema salsugineum HOM05D009056 ORTHO05D011508 3.5e-07 60.1 115 32.2
Sp6g01800 Schrenkiella parvula HOM05D009056 ORTHO05D011508 3.5e-07 60.1 130 34.6
C09p01340 Brassica napus HOM05D009056 ORTHO05D011508 6.0e-07 59.3 130 30.0
Thhalv10015280m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 6.0e-07 59.3 138 37.0
BcaC02g12724 Brassica carinata HOM05D009272 ORTHO05D010513 1.0e-06 58.5 113 35.4
BcaC04g24060 Brassica carinata HOM05D009056 ORTHO05D011508 1.0e-06 58.5 123 29.3
C04p02040 Brassica napus HOM05D009272 ORTHO05D010513 1.0e-06 58.5 113 35.4
C09p01500 Brassica napus HOM05D009056 ORTHO05D011508 1.0e-06 58.5 123 29.3
BolC4t21854H Brassica oleracea HOM05D009272 ORTHO05D010513 1.0e-06 58.5 113 35.4
BcaB01g03533 Brassica carinata HOM05D009272 ORTHO05D010513 1.3e-06 58.2 94 31.9
C06p16700 Brassica napus HOM05D009350 ORTHO05D010513 2.3e-06 57.4 121 33.9
BolC6t36869H Brassica oleracea HOM05D009350 ORTHO05D010513 2.3e-06 57.4 121 33.9
BcaB01g02112 Brassica carinata HOM05D009056 ORTHO05D011508 3.0e-06 57.0 115 30.4
C04p02100 Brassica napus HOM05D009272 ORTHO05D010513 3.0e-06 57.0 113 34.5
BolC4t21858H Brassica oleracea HOM05D009272 ORTHO05D010513 3.0e-06 57.0 113 34.5
Carub.0001s0160 Capsella rubella HOM05D009350 ORTHO05D010513 3.0e-06 57.0 133 32.3
Thhalv10017577m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 3.0e-06 57.0 70 40.0
C06p16850 Brassica napus HOM05D009350 ORTHO05D010513 3.9e-06 56.6 121 33.9
BolC6t36881H Brassica oleracea HOM05D009350 ORTHO05D010513 3.9e-06 56.6 121 33.9
BraA09t35794Z Brassica rapa HOM05D009056 ORTHO05D011508 3.9e-06 56.6 131 29.8
BcaC08g44261 Brassica carinata HOM05D009350 ORTHO05D010513 5.1e-06 56.2 121 33.9
BcaC08g44264 Brassica carinata HOM05D009350 ORTHO05D010513 5.1e-06 56.2 121 33.9
BcaC08g44265 Brassica carinata HOM05D009350 ORTHO05D010513 5.1e-06 56.2 121 33.9
BcaC08g44266 Brassica carinata HOM05D009350 ORTHO05D010513 5.1e-06 56.2 121 33.9
BcaC08g44267 Brassica carinata HOM05D009350 ORTHO05D010513 5.1e-06 56.2 121 33.9
C06p16770 Brassica napus HOM05D009350 ORTHO05D010513 5.1e-06 56.2 121 33.9
C06p16790 Brassica napus HOM05D009350 ORTHO05D010513 5.1e-06 56.2 121 33.9
C06p16820 Brassica napus HOM05D009350 ORTHO05D010513 5.1e-06 56.2 121 33.9
BolC6t36876H Brassica oleracea HOM05D009350 ORTHO05D010513 5.1e-06 56.2 121 33.9
BolC6t36877H Brassica oleracea HOM05D009350 ORTHO05D010513 5.1e-06 56.2 121 33.9
BolC6t36880H Brassica oleracea HOM05D009350 ORTHO05D010513 5.1e-06 56.2 121 33.9
BcaB01g02097 Brassica carinata HOM05D009056 ORTHO05D011508 8.7e-06 55.5 124 29.0
A05p16790 Brassica napus HOM05D009350 ORTHO05D010513 8.7e-06 55.5 121 33.9
A05p16800 Brassica napus HOM05D009350 ORTHO05D010513 8.7e-06 55.5 121 33.9
A05p16820 Brassica napus HOM05D009350 ORTHO05D010513 8.7e-06 55.5 121 33.9
A05p16860 Brassica napus HOM05D009350 ORTHO05D010513 8.7e-06 55.5 121 33.9
A05p16870 Brassica napus HOM05D009350 ORTHO05D010513 8.7e-06 55.5 121 33.9
BraA05t20584Z Brassica rapa HOM05D009350 ORTHO05D010513 8.7e-06 55.5 121 33.9
BraA05t20590Z Brassica rapa HOM05D009350 ORTHO05D010513 8.7e-06 55.5 121 33.9


User provided reference genes

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