Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22472 Brassica carinata HOM05D007865 ORTHO05D010123 1.1e-29 132.5 63 100.0
A02p07230 Brassica napus HOM05D007865 ORTHO05D010123 5.1e-14 80.5 47 80.9
A02p07240 Brassica napus HOM05D007865 ORTHO05D010123 5.1e-14 80.5 47 80.9
A02p07250 Brassica napus HOM05D007865 ORTHO05D010123 5.1e-14 80.5 47 80.9
A02p07380 Brassica napus HOM05D007865 ORTHO05D010123 5.1e-14 80.5 47 80.9
BraA02t05802Z Brassica rapa HOM05D007865 ORTHO05D010123 5.1e-14 80.5 47 80.9
BraA02t05803Z Brassica rapa HOM05D007865 ORTHO05D010123 5.1e-14 80.5 47 80.9
BraA02t05804Z Brassica rapa HOM05D007865 ORTHO05D010123 5.1e-14 80.5 47 80.9
BraA02t05817Z Brassica rapa HOM05D007865 ORTHO05D010123 5.1e-14 80.5 47 80.9
C02p12890 Brassica napus HOM05D007865 ORTHO05D010123 8.7e-14 79.7 47 78.7
BcaC03g14023 Brassica carinata HOM05D007865 ORTHO05D010123 1.1e-13 79.3 47 78.7
BcaC03g14024 Brassica carinata HOM05D007865 ORTHO05D010123 1.1e-13 79.3 47 78.7
BcaC03g14042 Brassica carinata HOM05D007865 ORTHO05D010123 1.1e-13 79.3 47 78.7
BcaC03g14053 Brassica carinata HOM05D007865 ORTHO05D010123 1.1e-13 79.3 47 78.7
C02p12860 Brassica napus HOM05D007865 ORTHO05D010123 1.1e-13 79.3 47 78.7
C02p12910 Brassica napus HOM05D007865 ORTHO05D010123 1.1e-13 79.3 47 78.7
BolC2t07361H Brassica oleracea HOM05D007865 ORTHO05D010123 1.1e-13 79.3 47 78.7
BolC2t07362H Brassica oleracea HOM05D007865 ORTHO05D010123 1.1e-13 79.3 47 78.7
BolC2t07382H Brassica oleracea HOM05D007865 ORTHO05D010123 1.1e-13 79.3 47 78.7
BolC2t07395H Brassica oleracea HOM05D007865 ORTHO05D010123 1.1e-13 79.3 47 78.7
BolC2t07397H Brassica oleracea HOM05D007865 ORTHO05D010123 1.5e-13 79.0 47 78.7
BcaB05g22471 Brassica carinata HOM05D007865 ORTHO05D010123 1.9e-13 78.6 51 74.5
BcaB05g22473 Brassica carinata HOM05D007865 ORTHO05D010123 1.9e-13 78.6 51 74.5
BcaB05g22474 Brassica carinata HOM05D007865 ORTHO05D010123 1.9e-13 78.6 51 74.5
BcaC03g14047 Brassica carinata HOM05D007865 ORTHO05D010123 2.5e-13 78.2 47 76.6
C02p12610 Brassica napus HOM05D007865 ORTHO05D010123 2.5e-13 78.2 47 76.6
BolC2t07384H Brassica oleracea HOM05D007865 ORTHO05D010123 2.5e-13 78.2 47 76.6
BcaC03g14051 Brassica carinata HOM05D007865 ORTHO05D010123 4.3e-13 77.4 47 76.6
C02p12900 Brassica napus HOM05D007865 ORTHO05D010123 4.3e-13 77.4 47 76.6
C02p12920 Brassica napus HOM05D007865 ORTHO05D010123 5.7e-13 77.0 47 76.6
BcaC03g14044 Brassica carinata HOM05D007865 ORTHO05D010123 9.7e-13 76.3 47 76.6
BolC2t07386H Brassica oleracea HOM05D007865 ORTHO05D010123 9.7e-13 76.3 47 76.6
SpUn1022_0010 Schrenkiella parvula HOM05D007865 ORTHO05D010123 8.5e-09 63.2 47 63.8
Thhalv10028345m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 7.2e-08 60.1 55 54.5
Thhalv10028104m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 9.4e-08 59.7 47 59.6
Thhalv10015599m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 2.7e-07 58.2 46 56.5
BcaB01g02171 Brassica carinata HOM05D007865 ORTHO05D010123 4.6e-07 57.4 55 54.5
A10p15300 Brassica napus HOM05D007865 ORTHO05D010123 6.1e-07 57.0 55 52.7
C09p51150 Brassica napus HOM05D007865 ORTHO05D010123 1.0e-06 56.2 55 54.5
BolC9t57977H Brassica oleracea HOM05D007865 ORTHO05D010123 1.0e-06 56.2 55 54.5
Thhalv10015750m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.0e-06 56.2 54 50.0
Thhalv10015954m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.0e-06 56.2 54 50.0
BcaB08g36307 Brassica carinata HOM05D007865 ORTHO05D010123 2.3e-06 55.1 54 53.7
A10p15310 Brassica napus HOM05D007865 ORTHO05D010123 2.3e-06 55.1 38 63.2
BraA10t43702Z Brassica rapa HOM05D007865 ORTHO05D010123 2.3e-06 55.1 38 63.2
AT1G35890 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 3.9e-06 54.3 37 62.2
C09p51140 Brassica napus HOM05D007865 ORTHO05D010123 3.9e-06 54.3 55 50.9
AT3G46565 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 5.1e-06 53.9 37 62.2
AL4G20480 Arabidopsis lyrata HOM05D014137 ORTHO05D010123 6.7e-06 53.5 55 47.3
AL4G20500 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 6.7e-06 53.5 55 47.3
AL8G35690 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 6.7e-06 53.5 37 62.2
Thhalv10015349m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 6.7e-06 53.5 54 48.1
AL8G35160 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 8.8e-06 53.1 37 62.2
AL8G35420 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 8.8e-06 53.1 52 51.9


User provided reference genes

Program Settings