Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22471 Brassica carinata HOM05D007865 ORTHO05D010123 6.2e-169 597.4 313 100.0
BcaB05g22474 Brassica carinata HOM05D007865 ORTHO05D010123 4.1e-128 461.8 315 81.9
BcaB05g22473 Brassica carinata HOM05D007865 ORTHO05D010123 3.6e-76 289.3 326 56.7
A02p07380 Brassica napus HOM05D007865 ORTHO05D010123 2.4e-72 276.6 321 54.8
BraA02t05817Z Brassica rapa HOM05D007865 ORTHO05D010123 2.4e-72 276.6 321 54.8
BcaC03g14042 Brassica carinata HOM05D007865 ORTHO05D010123 2.1e-71 273.5 318 55.7
C02p12860 Brassica napus HOM05D007865 ORTHO05D010123 1.3e-70 270.8 318 55.3
BcaC03g14023 Brassica carinata HOM05D007865 ORTHO05D010123 1.7e-70 270.4 319 54.9
BcaC03g14051 Brassica carinata HOM05D007865 ORTHO05D010123 2.3e-70 270.0 318 54.4
BcaC03g14053 Brassica carinata HOM05D007865 ORTHO05D010123 3.9e-70 269.2 318 55.3
BolC2t07384H Brassica oleracea HOM05D007865 ORTHO05D010123 8.6e-70 268.1 318 55.0
BcaC03g14047 Brassica carinata HOM05D007865 ORTHO05D010123 7.3e-69 265.0 318 54.1
C02p12890 Brassica napus HOM05D007865 ORTHO05D010123 8.9e-67 258.1 318 53.1
C02p12920 Brassica napus HOM05D007865 ORTHO05D010123 1.1e-64 251.1 317 53.0
BolC2t07382H Brassica oleracea HOM05D007865 ORTHO05D010123 8.6e-62 241.5 293 54.9
BolC2t07395H Brassica oleracea HOM05D007865 ORTHO05D010123 1.5e-61 240.7 294 55.4
A02p07230 Brassica napus HOM05D007865 ORTHO05D010123 9.5e-61 238.0 294 53.7
A02p07240 Brassica napus HOM05D007865 ORTHO05D010123 2.1e-60 236.9 294 53.7
A02p07250 Brassica napus HOM05D007865 ORTHO05D010123 2.1e-60 236.9 294 53.4
BraA02t05804Z Brassica rapa HOM05D007865 ORTHO05D010123 2.8e-60 236.5 294 54.8
BraA02t05803Z Brassica rapa HOM05D007865 ORTHO05D010123 1.1e-59 234.6 294 53.1
BcaC03g14044 Brassica carinata HOM05D007865 ORTHO05D010123 2.6e-58 229.9 293 53.6
BolC2t07386H Brassica oleracea HOM05D007865 ORTHO05D010123 2.6e-58 229.9 293 53.6
BraA02t05802Z Brassica rapa HOM05D007865 ORTHO05D010123 6.6e-54 215.3 275 53.8
C02p12610 Brassica napus HOM05D007865 ORTHO05D010123 7.6e-50 201.8 252 48.4
BolC2t07361H Brassica oleracea HOM05D007865 ORTHO05D010123 1.9e-48 197.2 140 79.3
BcaB05g22500 Brassica carinata HOM05D007865 ORTHO05D010123 3.2e-48 196.4 134 76.9
BcaC03g14024 Brassica carinata HOM05D007865 ORTHO05D010123 3.2e-48 196.4 139 77.7
BolC2t07362H Brassica oleracea HOM05D007865 ORTHO05D010123 3.2e-48 196.4 139 77.7
C02p12910 Brassica napus HOM05D007865 ORTHO05D010123 5.4e-48 195.7 138 78.3
C02p12900 Brassica napus HOM05D007865 ORTHO05D010123 2.1e-47 193.7 138 77.5
BolC2t07397H Brassica oleracea HOM05D007865 ORTHO05D010123 4.2e-40 169.5 236 47.9
AL4G20480 Arabidopsis lyrata HOM05D014137 ORTHO05D010123 5.3e-19 99.4 89 55.1
Thhalv10015750m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 6.9e-19 99.0 140 45.0
AL4G20500 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 9.0e-19 98.6 88 53.4
BcaC03g14025 Brassica carinata HOM05D007865 ORTHO05D010123 9.0e-19 98.6 96 56.2
Thhalv10015599m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.5e-18 97.8 246 35.4
BcaB08g36307 Brassica carinata HOM05D007865 ORTHO05D010123 2.0e-18 97.4 133 43.6
A10p15310 Brassica napus HOM05D007865 ORTHO05D010123 2.0e-18 97.4 136 42.6
BolC9t57977H Brassica oleracea HOM05D007865 ORTHO05D010123 2.0e-18 97.4 136 41.9
C09p51140 Brassica napus HOM05D007865 ORTHO05D010123 2.6e-18 97.1 135 43.0
Thhalv10015954m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 2.6e-18 97.1 140 44.3
BolC2t07398H Brassica oleracea HOM05D007865 ORTHO05D010123 5.9e-18 95.9 100 66.0
BraA10t43702Z Brassica rapa HOM05D007865 ORTHO05D010123 1.3e-17 94.7 136 40.4
A10p15300 Brassica napus HOM05D007865 ORTHO05D010123 1.7e-17 94.4 136 40.4
BcaB01g02171 Brassica carinata HOM05D007865 ORTHO05D010123 3.8e-17 93.2 133 43.6
Thhalv10015349m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 2.5e-16 90.5 176 36.9
AL8G35160 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 5.5e-16 89.4 220 31.4
C09p51150 Brassica napus HOM05D007865 ORTHO05D010123 5.5e-16 89.4 149 43.6
AL8G35690 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 1.2e-15 88.2 67 59.7
CARHR273100 Cardamine hirsuta HOM05D007865 ORTHO05D010123 7.9e-15 85.5 222 34.2
AL8G35420 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 3.9e-14 83.2 114 42.1
SpUn1022_0010 Schrenkiella parvula HOM05D007865 ORTHO05D010123 1.1e-13 81.6 56 69.6
AT1G35890 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 4.3e-13 79.7 149 38.3
Carub.0008s1968 Capsella rubella HOM05D007865 ORTHO05D010123 4.3e-13 79.7 67 52.2
Carub.0008s1992 Capsella rubella HOM05D007865 ORTHO05D010123 4.3e-13 79.7 67 52.2
Thhalv10028104m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.3e-12 78.2 64 59.4
AT3G46565 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 2.2e-12 77.4 70 52.9
BcaB05g22472 Brassica carinata HOM05D007865 ORTHO05D010123 2.2e-12 77.4 51 74.5
Thhalv10028345m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.7e-09 67.8 162 35.8
BolC9t57975H Brassica oleracea HOM05D007865 ORTHO05D010123 2.9e-09 67.0 135 34.8
Carub.0001s0263 Capsella rubella HOM05D007865 ORTHO05D010513 2.5e-08 63.9 72 43.1
CARHR249930 Cardamine hirsuta HOM05D009056 ORTHO05D011508 3.2e-08 63.5 84 41.7
Thhalv10009374m.g Eutrema salsugineum HOM05D009272 ORTHO05D010513 4.2e-08 63.2 82 39.0
Carub.0006s1626 Capsella rubella HOM05D007865 ORTHO05D010123 7.2e-08 62.4 82 42.7
BcaB03g13835 Brassica carinata HOM05D007865 ORTHO05D010123 3.6e-07 60.1 53 54.7
C05p01970 Brassica napus HOM05D009272 ORTHO05D015471 3.6e-07 60.1 103 36.9
C05p02270 Brassica napus HOM05D009272 ORTHO05D015471 3.6e-07 60.1 103 36.9
BcaB02g07852 Brassica carinata HOM05D009350 ORTHO05D010513 4.7e-07 59.7 92 37.0
BcaB01g03533 Brassica carinata HOM05D009272 ORTHO05D010513 6.1e-07 59.3 62 41.9
THA.LOC104806001 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 6.1e-07 59.3 64 39.1
THA.LOC104806002 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 6.1e-07 59.3 64 39.1
THA.LOC104818129 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 6.1e-07 59.3 64 39.1
BolC5t29005H Brassica oleracea HOM05D009272 ORTHO05D015471 7.9e-07 58.9 88 40.9
BraA10t42475Z Brassica rapa HOM05D009272 ORTHO05D015471 1.0e-06 58.5 75 42.7
Sp6g01800 Schrenkiella parvula HOM05D009056 ORTHO05D011508 1.4e-06 58.2 74 40.5
AT1G03490 Arabidopsis thaliana HOM05D009272 ORTHO05D010513 1.8e-06 57.8 80 36.2
BcaC05g24525 Brassica carinata HOM05D009272 ORTHO05D015471 1.8e-06 57.8 88 39.8
BolC5t28976H Brassica oleracea HOM05D009272 ORTHO05D015471 1.8e-06 57.8 88 39.8
CARHR289550 Cardamine hirsuta HOM05D009350 ORTHO05D010513 2.3e-06 57.4 87 37.9
Thhalv10017056m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 2.3e-06 57.4 59 45.8
Thhalv10017700m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 2.3e-06 57.4 59 45.8
Thhalv10017733m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 2.3e-06 57.4 59 45.8
Thhalv10029188m.g Eutrema salsugineum HOM05D009056 ORTHO05D011508 2.3e-06 57.4 60 43.3
Thhalv10017577m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 5.1e-06 56.2 69 40.6
BcaB01g02097 Brassica carinata HOM05D009056 ORTHO05D011508 6.7e-06 55.8 81 37.0


User provided reference genes

Program Settings