Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 1.1e-135 487.3 374 100.0
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 1.9e-87 327.0 311 93.9
BcaC06g31864 Brassica carinata HOM05D008735 ORTHO05D095380 5.4e-79 298.9 304 85.5
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 3.4e-57 226.5 427 52.7
BcaB01g01860 Brassica carinata HOM05D008735 ORTHO05D095819 3.6e-30 136.7 302 44.4
C04p32440 Brassica napus HOM05D008735 ORTHO05D099532 8.0e-22 109.0 144 59.0
C03p80320 Brassica napus HOM05D008735 ORTHO05D097331 5.2e-21 106.3 376 50.8
C02p46650 Brassica napus HOM05D008735 ORTHO05D098808 3.4e-20 103.6 375 45.6
C03p46960 Brassica napus HOM05D008735 ORTHO05D099308 7.5e-20 102.4 394 49.5
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 2.8e-19 100.5 141 46.1
C04p37860 Brassica napus HOM05D008735 ORTHO05D099266 4.8e-19 99.8 374 49.5
BcaB06g28918 Brassica carinata HOM05D008735 ORTHO05D092863 6.3e-19 99.4 75 90.7
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 6.3e-19 99.4 431 43.2
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 3.1e-18 97.1 157 49.0
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 2.7e-17 94.0 131 43.5
C03p79170 Brassica napus HOM05D008735 ORTHO05D098026 5.9e-17 92.8 131 55.7
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 5.0e-16 89.7 67 73.1
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 1.1e-15 88.6 156 48.1
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-15 88.2 89 59.6
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 3.3e-15 87.0 93 59.1
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 5.5e-15 86.3 161 50.9
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-14 85.1 92 59.8
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-14 85.1 89 57.3
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.2e-14 85.1 92 59.8
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 3.6e-14 83.6 91 57.1
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 3.6e-14 83.6 93 57.0
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 4.7e-14 83.2 92 57.6
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 4.7e-14 83.2 78 57.7
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 8.0e-14 82.4 98 52.0
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 8.0e-14 82.4 98 52.0
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 1.8e-13 81.3 86 57.0
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 3.0e-13 80.5 80 58.8
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 3.0e-13 80.5 93 55.9
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 4.0e-13 80.1 69 63.8
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 5.2e-13 79.7 69 63.8
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 5.2e-13 79.7 93 55.9
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 1.5e-12 78.2 78 60.3
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 1.5e-12 78.2 93 54.8
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-12 77.4 63 68.3
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 2.6e-12 77.4 103 49.5
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 9.8e-12 75.5 87 55.2
C09p44260 Brassica napus HOM05D008735 ORTHO05D016012 1.7e-11 74.7 358 40.8
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 2.2e-11 74.3 89 53.9
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 2.2e-11 74.3 89 53.9
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 3.7e-11 73.6 77 58.4
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 4.9e-11 73.2 85 52.9
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 1.1e-10 72.0 63 61.9
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 1.8e-10 71.2 104 47.1
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 1.8e-10 71.2 176 41.5
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 2.4e-10 70.9 53 69.8
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 3.2e-10 70.5 88 51.1
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 4.1e-10 70.1 170 38.8
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 5.4e-10 69.7 158 42.4
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 7.0e-10 69.3 154 43.5
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 9.2e-10 68.9 71 59.2
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 1.2e-09 68.6 59 62.7
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-09 68.6 144 39.6
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 1.6e-09 68.2 70 58.6
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 1.6e-09 68.2 176 40.9
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 1.6e-09 68.2 88 50.0
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.6e-09 68.2 176 40.9
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 2.7e-09 67.4 80 53.8
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 2.7e-09 67.4 63 60.3
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 2.7e-09 67.4 63 60.3
BcaB03g15896 Brassica carinata HOM05D008735 ORTHO05D092493 3.5e-09 67.0 126 38.9
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 3.5e-09 67.0 79 55.7
BcaC05g28239 Brassica carinata HOM05D008735 ORTHO05D016012 4.5e-09 66.6 93 49.5
BcaC07g38508 Brassica carinata HOM05D008735 ORTHO05D090800 4.5e-09 66.6 92 47.8
C03p79100 Brassica napus HOM05D008735 ORTHO05D101655 4.5e-09 66.6 356 46.1
BolC1t03988H Brassica oleracea HOM05D008735 ORTHO05D105559 4.5e-09 66.6 93 49.5
BolC4t25360H Brassica oleracea HOM05D008735 ORTHO05D016012 4.5e-09 66.6 93 49.5
BolC5t32640H Brassica oleracea HOM05D008735 ORTHO05D016012 4.5e-09 66.6 93 49.5
BolC5t33010H Brassica oleracea HOM05D008735 ORTHO05D016012 4.5e-09 66.6 93 49.5
C05p39020 Brassica napus HOM05D008735 ORTHO05D103688 5.9e-09 66.2 86 50.0
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 5.9e-09 66.2 97 48.5
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 7.8e-09 65.9 81 54.3
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 1.0e-08 65.5 136 44.1
BolC2t10158H Brassica oleracea HOM05D008735 ORTHO05D016012 1.0e-08 65.5 99 47.5
BcaNung01893 Brassica carinata HOM05D008735 ORTHO05D008395 1.3e-08 65.1 125 38.4
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 1.3e-08 65.1 81 54.3
C04p32450 Brassica napus HOM05D008735 ORTHO05D016012 1.7e-08 64.7 86 48.8
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 1.7e-08 64.7 89 49.4
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 2.9e-08 63.9 92 45.7
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 2.9e-08 63.9 76 52.6
BcaC08g47485 Brassica carinata HOM05D008735 ORTHO05D016012 3.9e-08 63.5 93 48.4
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 3.9e-08 63.5 88 47.7
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 3.9e-08 63.5 77 54.5
BolC6t40326H Brassica oleracea HOM05D008735 ORTHO05D016012 3.9e-08 63.5 93 48.4
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 3.9e-08 63.5 88 47.7
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 5.0e-08 63.2 87 50.6
BolC2t12040H Brassica oleracea HOM05D008735 ORTHO05D016012 5.0e-08 63.2 93 48.4
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 6.6e-08 62.8 88 48.9
BcaB07g32266 Brassica carinata HOM05D008735 ORTHO05D016012 8.6e-08 62.4 92 50.0
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-07 61.6 54 59.3
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-07 61.6 75 54.7
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 2.5e-07 60.8 71 56.3
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 2.5e-07 60.8 71 56.3
A10p06920 Brassica napus HOM05D004128 ORTHO05D028143 2.5e-07 60.8 67 61.2
BcaB06g27674 Brassica carinata HOM05D008735 ORTHO05D092069 3.3e-07 60.5 38 94.7
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 4.3e-07 60.1 78 52.6
C05p42820 Brassica napus HOM05D008735 ORTHO05D100509 5.6e-07 59.7 86 47.7
BcaB07g32265 Brassica carinata HOM05D004128 ORTHO05D095454 7.3e-07 59.3 276 35.9
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 7.3e-07 59.3 56 55.4
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 9.5e-07 58.9 86 44.2
BcaC06g35975 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-06 58.5 71 54.9
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-06 57.8 56 55.4
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-06 57.8 56 55.4
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-06 57.8 56 55.4
BolC4t26338H Brassica oleracea HOM05D008735 ORTHO05D106317 2.1e-06 57.8 76 47.4
BolC5t32922H Brassica oleracea HOM05D004128 ORTHO05D033837 2.1e-06 57.8 78 50.0
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-06 57.8 56 55.4
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 3.6e-06 57.0 56 55.4


User provided reference genes

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