Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22440 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-53 212.6 98 100.0
BcaB05g24681 Brassica carinata HOM05D001498 ORTHO05D008559 6.7e-21 104.0 51 88.2
BcaB04g17595 Brassica carinata HOM05D001498 ORTHO05D008559 6.1e-14 80.9 51 64.7
BcaB07g33212 Brassica carinata HOM05D001498 ORTHO05D008559 8.0e-14 80.5 51 64.7
BcaB05g22881 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-12 75.9 51 60.8
BcaB05g22949 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-12 75.9 51 60.8
BolC5t32332H Brassica oleracea HOM05D001498 ORTHO05D008559 5.7e-12 74.3 51 60.8
BolC5t33265H Brassica oleracea HOM05D001498 ORTHO05D008559 5.7e-12 74.3 51 60.8
BraA01t02472Z Brassica rapa HOM05D001498 ORTHO05D008559 5.7e-12 74.3 51 60.8
BcaC05g28455 Brassica carinata HOM05D001498 ORTHO05D008559 7.5e-12 73.9 51 58.8
BcaB04g17364 Brassica carinata HOM05D001498 ORTHO05D008559 9.8e-12 73.6 51 60.8
BcaC09g48601 Brassica carinata HOM05D001498 ORTHO05D008559 9.8e-12 73.6 51 60.8
BolC1t04765H Brassica oleracea HOM05D001498 ORTHO05D008559 9.8e-12 73.6 51 60.8
BcaB05g23794 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-11 73.2 51 58.8
BcaC09g48840 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-11 73.2 51 60.8
BolC4t26384H Brassica oleracea HOM05D001498 ORTHO05D008559 1.7e-11 72.8 51 60.8
BraSC37t46120Z Brassica rapa HOM05D001498 ORTHO05D008559 1.7e-11 72.8 51 58.8
BcaB01g02582 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-11 72.4 51 56.9
BcaB07g33942 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-11 72.4 51 56.9
BcaB05g24510 Brassica carinata HOM05D001498 ORTHO05D008559 2.8e-11 72.0 51 60.8
BcaB06g26316 Brassica carinata HOM05D001498 ORTHO05D008559 3.7e-11 71.6 51 56.9
BcaC02g12296 Brassica carinata HOM05D001498 ORTHO05D008559 3.7e-11 71.6 51 58.8
BraA01t01574Z Brassica rapa HOM05D001498 ORTHO05D008559 3.7e-11 71.6 51 58.8
BcaB01g01370 Brassica carinata HOM05D001498 ORTHO05D008559 4.8e-11 71.2 51 58.8
BcaB05g23075 Brassica carinata HOM05D001498 ORTHO05D008559 4.8e-11 71.2 51 60.8
BcaC06g35693 Brassica carinata HOM05D001498 ORTHO05D008559 4.8e-11 71.2 51 58.8
BcaC06g35772 Brassica carinata HOM05D001498 ORTHO05D008559 4.8e-11 71.2 51 58.8
BolC3t20363H Brassica oleracea HOM05D001498 ORTHO05D008559 4.8e-11 71.2 51 58.8
BolC7t41574H Brassica oleracea HOM05D001498 ORTHO05D008559 4.8e-11 71.2 51 58.8
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 6.3e-11 70.9 51 58.8
BcaB06g27025 Brassica carinata HOM05D001498 ORTHO05D008559 6.3e-11 70.9 51 60.8
BraA03t15279Z Brassica rapa HOM05D001498 ORTHO05D008559 6.3e-11 70.9 51 58.8
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 8.3e-11 70.5 51 60.8
BcaC06g36175 Brassica carinata HOM05D001498 ORTHO05D008559 8.3e-11 70.5 51 58.8
BcaB07g33318 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-10 69.7 51 58.8
BcaC07g39106 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-10 69.7 51 58.8
BcaB05g23540 Brassica carinata HOM05D001498 ORTHO05D008559 1.8e-10 69.3 51 58.8
BcaB06g26762 Brassica carinata HOM05D001498 ORTHO05D008559 1.8e-10 69.3 51 58.8
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 1.8e-10 69.3 51 58.8
BcaB04g17610 Brassica carinata HOM05D001498 ORTHO05D008559 2.4e-10 68.9 45 62.2
BolC6t36794H Brassica oleracea HOM05D001498 ORTHO05D008559 2.4e-10 68.9 51 56.9
BcaC05g27520 Brassica carinata HOM05D001498 ORTHO05D008559 3.1e-10 68.6 51 58.8
BcaC08g44055 Brassica carinata HOM05D001498 ORTHO05D008559 3.1e-10 68.6 51 58.8
BcaC08g44374 Brassica carinata HOM05D001498 ORTHO05D008559 3.1e-10 68.6 51 58.8
BolC3t16975H Brassica oleracea HOM05D001498 ORTHO05D008559 3.1e-10 68.6 51 58.8
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 3.1e-10 68.6 51 58.8
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 3.1e-10 68.6 51 58.8
BraA03t14503Z Brassica rapa HOM05D001498 ORTHO05D008559 3.1e-10 68.6 51 58.8
BraA09t40147Z Brassica rapa HOM05D001498 ORTHO05D008559 3.1e-10 68.6 51 58.8
BolC2t11287H Brassica oleracea HOM05D001498 ORTHO05D008559 4.1e-10 68.2 51 58.8
BcaC04g22430 Brassica carinata HOM05D001498 ORTHO05D008559 5.4e-10 67.8 45 64.4
BcaC05g26790 Brassica carinata HOM05D001498 ORTHO05D008559 5.4e-10 67.8 51 58.8
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 5.4e-10 67.8 45 64.4
BcaC01g02506 Brassica carinata HOM05D001498 ORTHO05D008559 7.0e-10 67.4 45 64.4
BcaC06g36449 Brassica carinata HOM05D001498 ORTHO05D008559 7.0e-10 67.4 45 64.4
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 7.0e-10 67.4 51 56.9
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 7.0e-10 67.4 51 56.9
BcaB01g01310 Brassica carinata HOM05D001498 ORTHO05D008559 9.1e-10 67.0 51 56.9
BcaB03g16805 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-09 66.6 52 55.8
BcaC05g26788 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-09 66.6 52 55.8
BcaB06g26679 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-09 66.2 51 52.9
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-09 66.2 51 56.9
BolC1t01630H Brassica oleracea HOM05D001498 ORTHO05D008559 2.0e-09 65.9 51 56.9
BolC3t13891H Brassica oleracea HOM05D001498 ORTHO05D008559 2.0e-09 65.9 51 56.9
BcaB04g17975 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-09 65.5 52 55.8
BcaB04g18490 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-09 65.5 53 52.8
BcaB06g26482 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-09 65.5 52 55.8
BcaB06g27204 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-09 65.5 51 51.0
BcaB07g32209 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-09 65.5 52 55.8
BcaB07g33755 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-09 65.5 52 55.8
BcaNung05286 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-09 65.5 52 55.8
BcaB04g17679 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-09 65.1 52 55.8
BcaC04g19550 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-09 65.1 45 62.2
BcaC08g43732 Brassica carinata HOM05D001498 ORTHO05D008559 4.5e-09 64.7 51 56.9
BcaB06g26728 Brassica carinata HOM05D001498 ORTHO05D008559 5.9e-09 64.3 52 53.8
BcaB01g01483 Brassica carinata HOM05D001498 ORTHO05D008559 7.7e-09 63.9 51 52.9
BcaB05g23076 Brassica carinata HOM05D001498 ORTHO05D008559 7.7e-09 63.9 52 53.8
BcaB01g03186 Brassica carinata HOM05D001498 ORTHO05D008559 1.0e-08 63.5 53 58.5
BcaB01g01186 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-08 63.2 51 52.9
BcaB02g11055 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-08 63.2 52 53.8
BcaB06g27857 Brassica carinata HOM05D001498 ORTHO05D008559 1.7e-08 62.8 52 53.8
BolC8t49594H Brassica oleracea HOM05D001498 ORTHO05D008559 1.7e-08 62.8 51 54.9
BcaB03g16073 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-08 62.4 51 51.0
BcaC05g27621 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-08 62.4 39 66.7
BcaB07g32914 Brassica carinata HOM05D001498 ORTHO05D008559 5.0e-08 61.2 51 52.9
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 5.0e-08 61.2 51 52.9
BcaB05g23121 Brassica carinata HOM05D001498 ORTHO05D008559 6.5e-08 60.8 52 51.9
BcaB05g23432 Brassica carinata HOM05D001498 ORTHO05D008559 6.5e-08 60.8 51 52.9
BcaB07g33219 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-07 60.1 52 51.9
BcaB02g11278 Brassica carinata HOM05D001498 ORTHO05D008559 1.9e-07 59.3 52 51.9
BcaC01g03922 Brassica carinata HOM05D001498 ORTHO05D008559 1.9e-07 59.3 42 59.5
BolC7t44374H Brassica oleracea HOM05D001498 ORTHO05D106148 3.2e-07 58.5 62 50.0
BcaB06g26760 Brassica carinata HOM05D002776 ORTHO05D008559 4.2e-07 58.2 49 51.0
BcaB01g01571 Brassica carinata HOM05D001498 ORTHO05D008559 9.4e-07 57.0 66 40.9
BcaC05g25871 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-06 56.6 42 57.1
BolC5t32218H Brassica oleracea HOM05D001498 ORTHO05D008559 1.6e-06 56.2 61 49.2
BcaC07g37924 Brassica carinata HOM05D001498 ORTHO05D008559 2.1e-06 55.8 51 45.1
BcaC01g02040 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-06 55.5 51 43.1
C03p69240 Brassica napus HOM05D008414 ORTHO05D008559 2.7e-06 55.5 51 43.1


User provided reference genes

Program Settings