Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22423 Brassica carinata HOM05D000401 ORTHO05D000252 1.7e-90 336.3 206 100.0
Sp6g20020 Schrenkiella parvula HOM05D000401 ORTHO05D000252 5.2e-47 191.8 207 70.0
A02p07760 Brassica napus HOM05D000401 ORTHO05D000252 1.4e-44 183.7 201 68.2
BcaC04g19874 Brassica carinata HOM05D000401 ORTHO05D000252 1.5e-38 163.7 217 61.3
BolC9t57880H Brassica oleracea HOM05D000401 ORTHO05D000252 1.5e-38 163.7 217 61.3
BraA02t05849Z Brassica rapa HOM05D000401 ORTHO05D000252 3.4e-38 162.5 201 56.7
C09p50230 Brassica napus HOM05D000401 ORTHO05D000252 7.5e-38 161.4 218 60.6
Thhalv10014213m.g Eutrema salsugineum HOM05D000401 ORTHO05D000252 6.3e-37 158.3 210 53.8
A10p15900 Brassica napus HOM05D000401 ORTHO05D000252 1.9e-33 146.7 219 56.2
BraA10t43635Z Brassica rapa HOM05D000401 ORTHO05D000252 1.9e-33 146.7 219 55.7
CARHR272190 Cardamine hirsuta HOM05D000401 ORTHO05D000252 3.7e-29 132.5 190 52.6
BolC2t07454H Brassica oleracea HOM05D000401 ORTHO05D042225 4.9e-29 132.1 165 65.5
BcaB08g36173 Brassica carinata HOM05D000401 ORTHO05D000252 1.1e-28 131.0 225 51.6
BcaC03g14102 Brassica carinata HOM05D000401 ORTHO05D000252 5.6e-25 118.6 200 53.0
AT5G58360 Arabidopsis thaliana HOM05D000401 ORTHO05D000252 1.2e-24 117.5 171 48.5
AL8G34480 Arabidopsis lyrata HOM05D000401 ORTHO05D000252 8.9e-23 111.3 186 47.3
C02p13420 Brassica napus HOM05D000401 ORTHO05D042225 8.9e-23 111.3 165 51.5
Aa31LG11G150 Aethionema arabicum HOM05D000401 ORTHO05D000252 1.6e-16 90.5 190 40.5
Carub.0008s1893 Capsella rubella HOM05D000401 ORTHO05D000252 1.0e-10 71.2 146 44.5
THA.LOC104814923 Tarenaya hassleriana HOM05D000401 ORTHO05D000252 4.3e-09 65.9 132 42.4
CiPaw.14G051600 Carya illinoinensis HOM05D000401 ORTHO05D000252 2.0e-06 57.0 119 37.0
Potri.019G128500 Populus trichocarpa HOM05D000401 ORTHO05D000252 2.0e-06 57.0 97 43.3
Sabra19G0126100 Salix brachista HOM05D000401 ORTHO05D000252 3.4e-06 56.2 97 38.1
BcaNung05667 Brassica carinata HOM05D000401 ORTHO05D000252 7.5e-06 55.1 90 38.9


User provided reference genes

Program Settings