Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22410 Brassica carinata HOM05D004416 ORTHO05D005439 3.7e-142 508.1 235 100.0
BcaB02g07287 Brassica carinata HOM05D004416 ORTHO05D005439 1.3e-123 446.4 235 88.1
BcaB07g33300 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-117 426.8 229 85.6
BcaB04g18755 Brassica carinata HOM05D004416 ORTHO05D005439 4.0e-112 408.3 235 78.7
BcaB03g16343 Brassica carinata HOM05D004416 ORTHO05D005439 2.0e-111 406.0 218 85.3
BcaB08g35239 Brassica carinata HOM05D004416 ORTHO05D005439 4.1e-109 398.3 235 77.0
A03p64740 Brassica napus HOM05D004416 ORTHO05D005439 7.1e-109 397.5 228 79.8
BraA03t15536Z Brassica rapa HOM05D004416 ORTHO05D005439 7.1e-109 397.5 228 79.8
BraA01t02500Z Brassica rapa HOM05D004416 ORTHO05D005439 6.0e-108 394.4 228 79.4
A06p26990 Brassica napus HOM05D004416 ORTHO05D005439 1.0e-107 393.7 235 75.7
A05p24910 Brassica napus HOM05D004416 ORTHO05D005439 1.7e-107 392.9 228 78.9
BcaB01g01830 Brassica carinata HOM05D004416 ORTHO05D005439 2.3e-107 392.5 230 77.8
BcaB04g18146 Brassica carinata HOM05D004416 ORTHO05D005439 2.3e-107 392.5 230 77.4
A06p35830 Brassica napus HOM05D004416 ORTHO05D005439 2.5e-106 389.0 231 77.1
A06p23940 Brassica napus HOM05D004416 ORTHO05D005439 9.6e-106 387.1 233 75.5
BcaB01g01525 Brassica carinata HOM05D004416 ORTHO05D005439 1.2e-105 386.7 230 76.1
A02p33880 Brassica napus HOM05D004416 ORTHO05D005439 2.1e-105 386.0 228 78.1
A05p21040 Brassica napus HOM05D004416 ORTHO05D005439 2.1e-105 386.0 228 77.2
BraA05t21008Z Brassica rapa HOM05D004416 ORTHO05D005439 2.1e-105 386.0 228 77.2
BcaB08g34713 Brassica carinata HOM05D004416 ORTHO05D005439 4.7e-105 384.8 231 76.2
BraA02t08406Z Brassica rapa HOM05D004416 ORTHO05D005439 6.2e-105 384.4 228 77.6
BraA06t25484Z Brassica rapa HOM05D004416 ORTHO05D005439 2.4e-104 382.5 228 76.3
BcaB05g23431 Brassica carinata HOM05D004416 ORTHO05D005439 8.9e-104 380.6 214 83.6
BcaC06g36549 Brassica carinata HOM05D004416 ORTHO05D005439 7.6e-103 377.5 227 73.1
BraA06t25908Z Brassica rapa HOM05D004416 ORTHO05D005439 9.9e-103 377.1 223 77.6
BcaB08g35284 Brassica carinata HOM05D004416 ORTHO05D005439 1.3e-102 376.7 232 75.0
BcaB06g27913 Brassica carinata HOM05D004416 ORTHO05D005439 1.3e-99 366.7 230 74.3
BcaC06g35428 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-98 363.6 232 69.0
C07p16300 Brassica napus HOM05D004416 ORTHO05D005439 1.1e-98 363.6 232 69.0
BcaB08g35481 Brassica carinata HOM05D004416 ORTHO05D005439 3.3e-98 362.1 214 76.2
BraA09t39013Z Brassica rapa HOM05D004416 ORTHO05D005439 3.3e-98 362.1 231 70.6
BcaB04g17617 Brassica carinata HOM05D004416 ORTHO05D005439 1.4e-96 356.7 230 72.2
BcaB01g02103 Brassica carinata HOM05D004416 ORTHO05D005439 5.3e-96 354.8 214 76.6
BolC8t47841H Brassica oleracea HOM05D004416 ORTHO05D005439 2.6e-95 352.4 211 74.9
A06p21490 Brassica napus HOM05D004416 ORTHO05D005439 9.9e-95 350.5 204 79.9
A09p34830 Brassica napus HOM05D004416 ORTHO05D005439 4.9e-94 348.2 216 72.2
BcaC07g37518 Brassica carinata HOM05D004416 ORTHO05D005439 4.2e-93 345.1 214 72.9
A06p23410 Brassica napus HOM05D004416 ORTHO05D005439 7.1e-93 344.4 203 75.4
C02p40220 Brassica napus HOM05D004416 ORTHO05D005439 7.1e-93 344.4 235 67.2
BcaC03g16239 Brassica carinata HOM05D004416 ORTHO05D005439 6.0e-92 341.3 235 66.8
BolC2t10047H Brassica oleracea HOM05D004416 ORTHO05D005439 6.0e-92 341.3 235 66.8
BraA04t16567Z Brassica rapa HOM05D004416 ORTHO05D005439 1.7e-91 339.7 204 77.5
C08p05960 Brassica napus HOM05D004416 ORTHO05D005439 3.9e-91 338.6 235 63.8
BraA10t42853Z Brassica rapa HOM05D004416 ORTHO05D005439 8.7e-91 337.4 228 69.7
A10p05910 Brassica napus HOM05D004416 ORTHO05D005439 3.3e-90 335.5 228 69.3
BolC3t19272H Brassica oleracea HOM05D004416 ORTHO05D005439 4.3e-90 335.1 235 64.7
BcaB06g26187 Brassica carinata HOM05D004416 ORTHO05D005439 1.3e-89 333.6 214 72.9
BcaC08g44284 Brassica carinata HOM05D004416 ORTHO05D005439 1.5e-87 326.6 211 70.6
C07p05230 Brassica napus HOM05D004416 ORTHO05D005439 4.9e-86 321.6 232 64.7
BolC7t40697H Brassica oleracea HOM05D004416 ORTHO05D005439 1.8e-83 313.2 190 74.2
C07p03030 Brassica napus HOM05D004416 ORTHO05D005439 3.9e-83 312.0 190 73.2
BcaB08g34992 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-80 303.9 176 77.3
A07p03080 Brassica napus HOM05D004416 ORTHO05D005439 1.9e-77 293.1 220 61.4
BolC8t47412H Brassica oleracea HOM05D004416 ORTHO05D005439 2.5e-77 292.7 205 61.0
C04p26840 Brassica napus HOM05D004416 ORTHO05D005439 4.2e-77 292.0 203 65.5
BcaB07g32576 Brassica carinata HOM05D004416 ORTHO05D005439 9.3e-77 290.8 211 63.0
BolC7t40921H Brassica oleracea HOM05D004416 ORTHO05D005439 9.3e-77 290.8 214 64.5
A05p24430 Brassica napus HOM05D004416 ORTHO05D005439 1.0e-75 287.3 202 66.8
C06p44170 Brassica napus HOM05D004416 ORTHO05D005439 1.9e-74 283.1 182 72.0
BolC6t39489H Brassica oleracea HOM05D004416 ORTHO05D005439 2.1e-73 279.6 182 71.4
BcaB01g01334 Brassica carinata HOM05D004416 ORTHO05D005439 1.2e-71 273.9 203 66.5
BcaB07g33958 Brassica carinata HOM05D004416 ORTHO05D005439 4.5e-71 271.9 176 66.5
C02p26230 Brassica napus HOM05D004416 ORTHO05D005439 6.5e-70 268.1 223 57.8
BolC2t08689H Brassica oleracea HOM05D004416 ORTHO05D005439 1.1e-69 267.3 223 58.3
C07p02610 Brassica napus HOM05D004416 ORTHO05D005439 1.9e-69 266.5 172 71.5
BolC7t40659H Brassica oleracea HOM05D004416 ORTHO05D005439 1.9e-69 266.5 172 71.5
BcaB05g23588 Brassica carinata HOM05D004416 ORTHO05D005439 9.3e-69 264.2 199 65.3
BcaB02g11237 Brassica carinata HOM05D004416 ORTHO05D005439 2.1e-68 263.1 216 60.6
BcaB06g27354 Brassica carinata HOM05D004416 ORTHO05D005439 7.9e-68 261.2 178 67.4
C04p45740 Brassica napus HOM05D004416 ORTHO05D005439 4.3e-66 255.4 225 54.7
C03p64670 Brassica napus HOM05D004416 ORTHO05D005439 1.4e-64 250.4 154 74.7
BolC3t18725H Brassica oleracea HOM05D004416 ORTHO05D005439 1.4e-64 250.4 154 74.7
A07p06300 Brassica napus HOM05D004416 ORTHO05D005439 3.1e-64 249.2 195 64.1
A01p28270 Brassica napus HOM05D004416 ORTHO05D005439 5.3e-64 248.4 161 66.5
BraA02t07941Z Brassica rapa HOM05D004416 ORTHO05D005439 4.5e-63 245.4 212 58.0
BcaB06g27181 Brassica carinata HOM05D004416 ORTHO05D005439 1.0e-62 244.2 137 87.6
BcaC03g15854 Brassica carinata HOM05D004416 ORTHO05D005439 1.7e-62 243.4 153 71.9
A02p29090 Brassica napus HOM05D004416 ORTHO05D005439 2.2e-62 243.0 212 57.5
BolC9t58507H Brassica oleracea HOM05D004416 ORTHO05D005439 2.2e-62 243.0 216 54.6
A06p14140 Brassica napus HOM05D004416 ORTHO05D005439 6.5e-62 241.5 195 63.6
C02p48380 Brassica napus HOM05D004416 ORTHO05D005439 5.5e-61 238.4 391 35.5
BolC2t10869H Brassica oleracea HOM05D004416 ORTHO05D005439 5.5e-61 238.4 391 35.5
BcaB02g10429 Brassica carinata HOM05D004416 ORTHO05D005439 1.6e-60 236.9 183 65.6
C06p17070 Brassica napus HOM05D004416 ORTHO05D005439 1.4e-59 233.8 184 62.0
C03p70170 Brassica napus HOM05D004416 ORTHO05D005439 3.9e-59 232.3 235 48.5
C04p30580 Brassica napus HOM05D004416 ORTHO05D005439 5.1e-59 231.9 211 55.0
BcaB08g35472 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-58 230.7 157 67.5
BolC6t36905H Brassica oleracea HOM05D004416 ORTHO05D005439 1.1e-58 230.7 184 61.4
BolC4t24120H Brassica oleracea HOM05D004416 ORTHO05D005439 4.8e-57 225.3 154 68.2
BcaB03g16134 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-56 224.2 153 68.0
BcaB03g16728 Brassica carinata HOM05D004416 ORTHO05D005439 2.4e-56 223.0 160 71.2
BcaC06g36337 Brassica carinata HOM05D004416 ORTHO05D005439 2.2e-54 216.5 184 59.2
BcaB03g16764 Brassica carinata HOM05D004416 ORTHO05D005439 2.5e-53 213.0 152 72.4
BcaC03g16936 Brassica carinata HOM05D004416 ORTHO05D005439 6.1e-52 208.4 170 60.6
BraA05t21334Z Brassica rapa HOM05D004416 ORTHO05D005439 6.1e-52 208.4 131 69.5
BcaB01g01401 Brassica carinata HOM05D004416 ORTHO05D005439 1.0e-51 207.6 166 60.8
A01p25060 Brassica napus HOM05D004416 ORTHO05D005439 1.0e-51 207.6 137 66.4
BcaB02g11426 Brassica carinata HOM05D004416 ORTHO05D005439 3.0e-51 206.1 177 58.2
BcaB08g35336 Brassica carinata HOM05D004416 ORTHO05D005439 3.0e-51 206.1 166 60.2
BcaC02g10699 Brassica carinata HOM05D004416 ORTHO05D005439 6.7e-51 204.9 170 58.8
BcaC03g15907 Brassica carinata HOM05D004416 ORTHO05D005439 9.7e-50 201.1 170 58.8
BcaC01g01957 Brassica carinata HOM05D004416 ORTHO05D005439 1.3e-49 200.7 170 58.2
BcaB07g33926 Brassica carinata HOM05D004416 ORTHO05D005439 4.1e-48 195.7 166 58.4
A05p23220 Brassica napus HOM05D004416 ORTHO05D005439 5.3e-48 195.3 115 72.2
BcaB08g35163 Brassica carinata HOM05D004416 ORTHO05D005439 7.0e-48 194.9 166 57.8
C05p42380 Brassica napus HOM05D004416 ORTHO05D005439 4.5e-47 192.2 116 78.4
BolC5t32967H Brassica oleracea HOM05D004416 ORTHO05D005439 4.5e-47 192.2 116 78.4
C07p14120 Brassica napus HOM05D004416 ORTHO05D005439 1.5e-45 187.2 170 55.9
BolC7t41909H Brassica oleracea HOM05D004416 ORTHO05D005439 1.5e-45 187.2 170 55.9
BolC5t32488H Brassica oleracea HOM05D004416 ORTHO05D005439 3.2e-45 186.0 177 53.7
BraA07t27948Z Brassica rapa HOM05D004416 ORTHO05D005439 5.5e-45 185.3 110 79.1
A05p23250 Brassica napus HOM05D004416 ORTHO05D005439 2.1e-44 183.3 103 85.4
C05p37470 Brassica napus HOM05D004416 ORTHO05D005439 1.0e-43 181.0 177 53.1
A07p01480 Brassica napus HOM05D004416 ORTHO05D005439 1.4e-43 180.6 110 78.2
C02p39710 Brassica napus HOM05D004416 ORTHO05D005439 1.1e-42 177.6 142 59.9
BolC4t26159H Brassica oleracea HOM05D004416 ORTHO05D005439 2.6e-42 176.4 125 59.2
A06p24200 Brassica napus HOM05D004416 ORTHO05D005439 7.5e-42 174.9 195 49.2
A04p13940 Brassica napus HOM05D004416 ORTHO05D005439 2.8e-41 172.9 116 70.7
A01p27350 Brassica napus HOM05D004416 ORTHO05D005439 2.7e-39 166.4 99 77.8
A04p03910 Brassica napus HOM05D004416 ORTHO05D005439 7.7e-39 164.9 203 43.3
BraA04t16112Z Brassica rapa HOM05D004416 ORTHO05D005439 7.7e-39 164.9 203 43.3
C07p09190 Brassica napus HOM05D004416 ORTHO05D005439 1.0e-38 164.5 94 81.9
C09p56380 Brassica napus HOM05D004416 ORTHO05D005439 1.2e-36 157.5 129 54.3
C04p46680 Brassica napus HOM05D004416 ORTHO05D005439 2.7e-36 156.4 163 49.7
C03p88240 Brassica napus HOM05D004416 ORTHO05D005439 4.0e-35 152.5 235 40.4
C05p32850 Brassica napus HOM05D004416 ORTHO05D005439 8.8e-35 151.4 138 58.7
BolC5t32016H Brassica oleracea HOM05D004416 ORTHO05D005439 8.8e-35 151.4 138 58.7
BolC7t41331H Brassica oleracea HOM05D004416 ORTHO05D005439 3.4e-34 149.4 86 81.4
C06p19740 Brassica napus HOM05D004416 ORTHO05D005439 4.4e-34 149.1 160 51.9
C02p36050 Brassica napus HOM05D004416 ORTHO05D005439 2.4e-32 143.3 85 75.3
C02p36020 Brassica napus HOM05D004416 ORTHO05D005439 4.1e-32 142.5 85 75.3
BolC2t09620H Brassica oleracea HOM05D004416 ORTHO05D005439 3.5e-31 139.4 85 75.3
BcaB07g32851 Brassica carinata HOM05D004416 ORTHO05D005439 1.7e-30 137.1 86 75.6
BcaB07g33907 Brassica carinata HOM05D004416 ORTHO05D005439 8.5e-30 134.8 89 70.8
BcaB04g18307 Brassica carinata HOM05D004416 ORTHO05D005439 4.2e-29 132.5 113 57.5
A10p08170 Brassica napus HOM05D004416 ORTHO05D005439 7.2e-29 131.7 86 69.8
BolC4t26256H Brassica oleracea HOM05D004416 ORTHO05D005439 1.2e-28 131.0 132 52.3
A09p32950 Brassica napus HOM05D004416 ORTHO05D005439 1.6e-28 130.6 80 66.2
BcaB02g06414 Brassica carinata HOM05D004416 ORTHO05D005439 4.7e-28 129.0 86 68.6
BraSC35t45982Z Brassica rapa HOM05D004416 ORTHO05D005439 6.1e-28 128.6 86 68.6
C05p42270 Brassica napus HOM05D004416 ORTHO05D005439 8.0e-28 128.3 85 69.4
BolC7t41080H Brassica oleracea HOM05D004416 ORTHO05D005439 1.8e-24 117.1 82 61.0
C06p12610 Brassica napus HOM05D004416 ORTHO05D005439 4.1e-24 115.9 73 74.0
A06p19220 Brassica napus HOM05D004416 ORTHO05D005439 9.2e-24 114.8 106 60.4
C07p06580 Brassica napus HOM05D004416 ORTHO05D005439 9.2e-24 114.8 82 59.8
C01p33390 Brassica napus HOM05D004416 ORTHO05D005439 3.5e-23 112.8 73 63.0
BraA07t28105Z Brassica rapa HOM05D004416 ORTHO05D005439 5.2e-19 99.0 106 52.8
BraA01t02594Z Brassica rapa HOM05D004416 ORTHO05D005439 4.4e-18 95.9 67 55.2
BraA04t16462Z Brassica rapa HOM05D004416 ORTHO05D005439 7.0e-16 88.6 75 61.3
A03p65040 Brassica napus HOM05D004416 ORTHO05D005439 9.2e-16 88.2 57 68.4
BolC2t09621H Brassica oleracea HOM05D004416 ORTHO05D033189 1.3e-14 84.3 53 66.0
BolC5t32955H Brassica oleracea HOM05D004416 ORTHO05D005439 2.3e-14 83.6 55 70.9
BcaB07g32527 Brassica carinata HOM05D004416 ORTHO05D005439 5.0e-14 82.4 49 79.6
C02p36030 Brassica napus HOM05D004416 ORTHO05D033189 2.1e-12 77.0 51 64.7
C02p36060 Brassica napus HOM05D004416 ORTHO05D033189 2.1e-12 77.0 51 64.7
BolC2t09672H Brassica oleracea HOM05D004416 ORTHO05D005439 3.6e-12 76.3 83 47.0
BraA01t02875Z Brassica rapa HOM05D004416 ORTHO05D005439 1.0e-11 74.7 89 49.4
Thhalv10023136m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 2.0e-10 70.5 245 28.6
BolC2t09671H Brassica oleracea HOM05D004416 ORTHO05D005439 3.4e-10 69.7 44 59.1
BraA03t15563Z Brassica rapa HOM05D004416 ORTHO05D005439 3.4e-10 69.7 42 59.5
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 1.9e-08 63.9 121 31.4
Sp6g11210 Schrenkiella parvula HOM05D001379 ORTHO05D001277 7.0e-08 62.0 149 27.5
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 1.2e-07 61.2 118 28.0
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 1.6e-07 60.8 115 29.6
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.7e-07 60.1 117 29.1
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.7e-07 60.1 118 28.0
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 4.6e-07 59.3 131 30.5
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 4.6e-07 59.3 130 30.0
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 4.6e-07 59.3 118 28.0
BraA06t25626Z Brassica rapa HOM05D004416 ORTHO05D005439 6.0e-07 58.9 50 46.0
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 7.8e-07 58.5 118 27.1
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.0e-06 58.2 121 30.6
Ciclev10033456m.g Citrus clementina HOM05D002915 ORTHO05D003004 1.0e-06 58.2 115 27.0
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 1.0e-06 58.2 120 29.2
ECA233G1149 Erigeron canadensis HOM05D000825 ORTHO05D003004 1.0e-06 58.2 117 29.9
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 1.0e-06 58.2 120 28.3
Oeu033490.1 Olea europaea HOM05D002915 ORTHO05D003004 1.7e-06 57.4 128 25.0
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 3.0e-06 56.6 122 28.7
MD16G1169500 Malus domestica HOM05D002915 ORTHO05D003004 3.0e-06 56.6 132 28.8
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 3.0e-06 56.6 116 29.3
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 5.0e-06 55.8 131 29.0
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 5.0e-06 55.8 131 29.0
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 5.0e-06 55.8 131 29.0
CARHR060200 Cardamine hirsuta HOM05D002915 ORTHO05D003004 5.0e-06 55.8 120 30.8
CsaV3_1G004340 Cucumis sativus L. HOM05D002915 ORTHO05D003004 5.0e-06 55.8 129 28.7
BolC4t26160H Brassica oleracea HOM05D004416 ORTHO05D005439 8.6e-06 55.1 43 58.1


User provided reference genes

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