Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22386 Brassica carinata HOM05D003759 ORTHO05D004149 6.7e-105 384.0 196 100.0
C02p13760 Brassica napus HOM05D003759 ORTHO05D004149 6.7e-105 384.0 196 100.0
BolC2t07494H Brassica oleracea HOM05D003759 ORTHO05D004149 6.7e-105 384.0 196 100.0
A02p08110 Brassica napus HOM05D003759 ORTHO05D004149 1.3e-92 343.2 199 91.0
BraA02t05884Z Brassica rapa HOM05D003759 ORTHO05D004149 2.3e-92 342.4 198 91.4
BcaB05g22385 Brassica carinata HOM05D003759 ORTHO05D004149 1.9e-83 312.8 210 81.4
Thhalv10014665m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 4.7e-66 255.0 214 70.1
AT5G57910 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 1.1e-65 253.8 215 70.2
BolC3t13911H Brassica oleracea HOM05D003759 ORTHO05D004149 1.1e-65 253.8 221 71.5
Carub.0008s1844 Capsella rubella HOM05D003759 ORTHO05D004149 2.3e-65 252.7 215 66.5
C03p14700 Brassica napus HOM05D003759 ORTHO05D004149 5.2e-65 251.5 221 71.0
A03p12490 Brassica napus HOM05D003759 ORTHO05D004149 6.8e-65 251.1 220 71.4
BraA03t10564Z Brassica rapa HOM05D003759 ORTHO05D004149 1.6e-58 229.9 220 66.8
BolC9t57829H Brassica oleracea HOM05D003759 ORTHO05D004149 1.4e-57 226.9 211 68.2
C09p49780 Brassica napus HOM05D003759 ORTHO05D004149 5.2e-57 224.9 210 68.1
A10p15270 Brassica napus HOM05D003759 ORTHO05D004149 2.2e-55 219.5 203 69.5
BraA10t43608Z Brassica rapa HOM05D003759 ORTHO05D004149 4.9e-55 218.4 203 69.0
CARHR271690 Cardamine hirsuta HOM05D003759 ORTHO05D004149 1.3e-52 210.3 212 62.7
AL8G33980 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 1.8e-49 199.9 174 67.2
BcaB01g04466 Brassica carinata HOM05D003759 ORTHO05D004149 6.4e-47 191.4 187 66.8
Sp6g19580 Schrenkiella parvula HOM05D003759 ORTHO05D004149 2.4e-46 189.5 162 70.4
Aa31LG3G13740 Aethionema arabicum HOM05D003759 ORTHO05D004149 4.6e-45 185.3 201 56.7
THA.LOC104813538 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.3e-28 130.6 207 41.5
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 1.8e-20 103.6 248 35.1
BolC1t00818H Brassica oleracea HOM05D003759 ORTHO05D004149 1.3e-18 97.4 202 37.1
BcaC09g51852 Brassica carinata HOM05D003759 ORTHO05D004149 6.3e-18 95.1 207 37.7
A01p07630 Brassica napus HOM05D003759 ORTHO05D004149 8.2e-18 94.7 204 36.8
BraA01t00706Z Brassica rapa HOM05D003759 ORTHO05D004149 1.1e-17 94.4 204 36.8
C01p08320 Brassica napus HOM05D003759 ORTHO05D004149 1.4e-17 94.0 205 37.6
THA.LOC104819991 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.8e-17 93.6 237 35.4
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 4.1e-17 92.4 223 36.8
BcaNung02973 Brassica carinata HOM05D003759 ORTHO05D004149 6.9e-17 91.7 218 36.2
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 6.9e-17 91.7 242 36.0
Sp7g28510 Schrenkiella parvula HOM05D003759 ORTHO05D004149 6.9e-17 91.7 229 34.5
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 1.5e-16 90.5 245 36.3
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 2.6e-16 89.7 244 35.2
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 3.4e-16 89.4 243 35.0
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 5.9e-16 88.6 243 36.2
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 1.0e-15 87.8 239 33.5
A03p60150 Brassica napus HOM05D003759 ORTHO05D004149 1.3e-15 87.4 203 36.9
BraA03t15060Z Brassica rapa HOM05D003759 ORTHO05D004149 1.3e-15 87.4 203 36.9
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 1.7e-15 87.0 244 34.4
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 2.2e-15 86.7 258 31.8
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 2.9e-15 86.3 247 34.8
BcaNung04561 Brassica carinata HOM05D003759 ORTHO05D004149 6.5e-15 85.1 220 36.8
C07p58060 Brassica napus HOM05D000058 ORTHO05D000077 1.1e-14 84.3 205 37.1
BolC7t46265H Brassica oleracea HOM05D003759 ORTHO05D004149 1.1e-14 84.3 205 37.1
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.1e-14 84.3 236 31.8
BcaNung00572 Brassica carinata HOM05D003759 ORTHO05D004149 1.9e-14 83.6 205 37.1
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 3.2e-14 82.8 184 33.2
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 4.2e-14 82.4 246 32.5
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 4.2e-14 82.4 266 30.1
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 7.2e-14 81.6 216 35.2
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 9.4e-14 81.3 234 32.9
Migut.K00316 Erythranthe guttata HOM05D003759 ORTHO05D004149 1.2e-13 80.9 221 32.6
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 1.2e-13 80.9 236 31.4
THA.LOC104803918 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.2e-13 80.9 235 31.5
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 2.7e-13 79.7 243 30.9
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 3.6e-13 79.3 245 33.1
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 4.6e-13 79.0 69 58.0
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 6.1e-13 78.6 78 57.7
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 6.1e-13 78.6 243 34.2
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 1.0e-12 77.8 239 35.6
Gohir.D07G031400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.0e-12 77.8 249 31.7
Gorai.001G032800 Gossypium raimondii HOM05D003759 ORTHO05D004149 1.0e-12 77.8 249 31.7
unitig_748.g7198 Utricularia gibba HOM05D003759 ORTHO05D004149 1.0e-12 77.8 234 29.1
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 1.4e-12 77.4 243 30.0
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 1.4e-12 77.4 280 31.8
ClCG02G014430 Citrullus lanatus HOM05D003759 ORTHO05D004149 2.3e-12 76.6 241 31.5
Prupe.7G264400 Prunus persica HOM05D003759 ORTHO05D004149 2.3e-12 76.6 245 29.8
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 3.0e-12 76.3 246 29.3
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 3.0e-12 76.3 244 30.7
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 3.0e-12 76.3 67 53.7
AL7G21510 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 3.9e-12 75.9 239 34.3
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 3.9e-12 75.9 239 33.5
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 3.9e-12 75.9 290 28.3
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 6.7e-12 75.1 237 27.8
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 6.7e-12 75.1 232 31.9
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 8.8e-12 74.7 218 33.5
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 8.8e-12 74.7 287 26.1
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 8.8e-12 74.7 244 31.6
Aa31LG2G19870 Aethionema arabicum HOM05D003759 ORTHO05D004149 1.1e-11 74.3 203 31.5
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 1.1e-11 74.3 192 36.5
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 1.5e-11 73.9 61 59.0
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 2.0e-11 73.6 247 32.0
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 2.0e-11 73.6 247 32.0
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 2.0e-11 73.6 123 39.0
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 3.3e-11 72.8 245 29.4
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 4.3e-11 72.4 243 28.8
Migut.J01364 Erythranthe guttata HOM05D003759 ORTHO05D004149 4.3e-11 72.4 271 29.5
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 7.4e-11 71.6 241 32.0
Gohir.A07G027400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 9.7e-11 71.2 245 31.0
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.7e-10 70.5 66 51.5
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 1.7e-10 70.5 267 29.6
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 2.2e-10 70.1 242 29.3
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 3.7e-10 69.3 66 53.0
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 3.7e-10 69.3 221 33.9
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 6.3e-10 68.6 246 27.6
Carub.0007s0993 Capsella rubella HOM05D003759 ORTHO05D004149 6.3e-10 68.6 210 32.9
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 8.2e-10 68.2 289 28.0
MSTRG.6151 Avicennia marina HOM05D003759 ORTHO05D004149 1.1e-09 67.8 284 27.1
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 1.1e-09 67.8 102 37.3
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 1.1e-09 67.8 245 28.6
AT4G30630 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 1.4e-09 67.4 229 31.9
vmacro16796 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 1.4e-09 67.4 66 51.5
Gohir.D05G054500 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.8e-09 67.0 237 27.0
Gorai.009G056200 Gossypium raimondii HOM05D003759 ORTHO05D004149 1.8e-09 67.0 237 27.0
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 2.4e-09 66.6 65 53.8
MELO3C004129.2 Cucumis melo HOM05D003759 ORTHO05D004149 2.4e-09 66.6 260 29.2
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 2.4e-09 66.6 191 34.0
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 2.4e-09 66.6 80 48.8
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 3.1e-09 66.2 247 28.3
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 4.1e-09 65.9 246 29.7
PSO384G1085 Papaver somniferum HOM05D003759 ORTHO05D004149 4.1e-09 65.9 198 35.4
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 5.3e-09 65.5 280 28.6
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 6.9e-09 65.1 283 29.0
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 9.1e-09 64.7 54 55.6
TWI63G0632 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 1.2e-08 64.3 117 36.8
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 2.0e-08 63.5 58 51.7
Hma1.2p1_0222F.1_g093653 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 2.0e-08 63.5 89 43.8
Hma1.2p1_2680F.1_g326810 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 2.0e-08 63.5 89 43.8
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 2.0e-08 63.5 249 30.1
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 2.6e-08 63.2 243 31.3
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 3.4e-08 62.8 243 31.3
Lsat_1_v5_gn_5_90100 Lactuca sativa HOM05D003759 ORTHO05D004149 7.7e-08 61.6 203 33.0
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 1.0e-07 61.2 278 26.6
Nitab4.5_0008875g0010 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.0e-07 61.2 276 27.5
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 1.0e-07 61.2 88 43.2
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 1.3e-07 60.8 279 27.6
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 1.7e-07 60.5 151 31.8
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 2.2e-07 60.1 148 29.7
Thhalv10026294m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 2.2e-07 60.1 197 33.5
Aqoxy7G03381 Aquilegia oxysepala HOM05D003759 ORTHO05D004149 2.9e-07 59.7 192 30.7
CAN.G551.47 Capsicum annuum HOM05D003759 ORTHO05D004149 2.9e-07 59.7 261 29.1
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 3.8e-07 59.3 277 28.9
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 3.8e-07 59.3 280 27.5
Gohir.A05G052900 Gossypium hirsutum HOM05D003759 ORTHO05D004149 5.0e-07 58.9 237 28.3
Sed0022175 Sechium edule HOM05D003759 ORTHO05D004149 5.0e-07 58.9 137 35.0
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 5.0e-07 58.9 251 27.5
unitig_0.g2686 Utricularia gibba HOM05D003759 ORTHO05D004149 5.0e-07 58.9 235 25.1
HanXRQChr03g0065561 Helianthus annuus HOM05D003759 ORTHO05D004149 6.5e-07 58.5 237 27.8
CARHR238510 Cardamine hirsuta HOM05D003759 ORTHO05D004149 8.5e-07 58.2 227 29.1
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 8.5e-07 58.2 232 28.4
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 8.5e-07 58.2 276 25.7
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 1.4e-06 57.4 56 53.6
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.9e-06 57.0 282 28.4
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 2.5e-06 56.6 249 27.7
HPP92_018342 Vanilla planifolia HOM05D003759 ORTHO05D004149 2.5e-06 56.6 195 28.2
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 3.2e-06 56.2 276 26.4
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 7.2e-06 55.1 64 39.1
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 9.4e-06 54.7 237 26.6


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