Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22368 Brassica carinata HOM05D019329 ORTHO05D031884 7.6e-32 139.8 67 100.0
BcaB02g08640 Brassica carinata HOM05D019329 ORTHO05D031884 7.8e-29 129.8 62 98.4
BcaB07g30123 Brassica carinata HOM05D019329 ORTHO05D031884 7.8e-29 129.8 62 98.4
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 4.9e-15 84.0 59 67.8
C05p19710 Brassica napus HOM05D000675 ORTHO05D000395 7.1e-14 80.1 59 66.1
BcaC09g49047 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-13 79.3 59 64.4
C04p15800 Brassica napus HOM05D000675 ORTHO05D000395 6.0e-13 77.0 59 64.4
BolC2t09927H Brassica oleracea HOM05D000675 ORTHO05D018598 6.0e-13 77.0 59 62.7
BolC3t19417H Brassica oleracea HOM05D000675 ORTHO05D018598 1.0e-12 76.3 58 63.8
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 1.0e-12 76.3 62 61.3
C01p43180 Brassica napus HOM05D000675 ORTHO05D013785 1.8e-12 75.5 62 59.7
BcaC01g01855 Brassica carinata HOM05D000675 ORTHO05D000395 5.1e-12 73.9 58 62.1
BolC7t42635H Brassica oleracea HOM05D000675 ORTHO05D000395 5.1e-12 73.9 58 60.3
A09p33950 Brassica napus HOM05D000675 ORTHO05D000395 6.7e-12 73.6 59 59.3
BraA09t38942Z Brassica rapa HOM05D000675 ORTHO05D003044 6.7e-12 73.6 59 59.3
BcaC06g34976 Brassica carinata HOM05D000675 ORTHO05D000395 3.3e-11 71.2 58 60.3
BraA07t28286Z Brassica rapa HOM05D000675 ORTHO05D000395 3.3e-11 71.2 70 51.4
BolC8t48427H Brassica oleracea HOM05D000675 ORTHO05D000395 4.3e-11 70.9 57 59.6
C05p17010 Brassica napus HOM05D000675 ORTHO05D000395 1.6e-10 68.9 57 59.6
C02p39190 Brassica napus HOM05D000675 ORTHO05D000395 2.8e-10 68.2 58 56.9
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 2.8e-10 68.2 58 56.9
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 8.2e-10 66.6 58 53.4
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 8.2e-10 66.6 58 53.4
C01p24850 Brassica napus HOM05D000675 ORTHO05D017590 4.0e-09 64.3 38 76.3
BcaB04g18225 Brassica carinata HOM05D000675 ORTHO05D013785 1.2e-08 62.8 42 61.9
BcaB03g16231 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-08 62.0 59 50.8
BcaB04g17831 Brassica carinata HOM05D000675 ORTHO05D000395 3.4e-08 61.2 59 49.2
BcaB06g27042 Brassica carinata HOM05D000675 ORTHO05D000395 4.5e-08 60.8 59 50.8
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 4.5e-08 60.8 60 51.7
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 4.5e-08 60.8 60 51.7
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 4.5e-08 60.8 60 51.7
BcaC03g15099 Brassica carinata HOM05D019329 ORTHO05D000395 1.3e-07 59.3 33 75.8
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-07 59.3 45 64.4
BcaC09g50290 Brassica carinata HOM05D000675 ORTHO05D000395 2.2e-07 58.5 58 55.2
BcaC09g50444 Brassica carinata HOM05D000675 ORTHO05D017590 4.9e-07 57.4 35 71.4
C02p54990 Brassica napus HOM05D000675 ORTHO05D000395 6.5e-07 57.0 64 48.4
C06p22620 Brassica napus HOM05D000675 ORTHO05D013785 6.5e-07 57.0 30 80.0
BcaB01g01443 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-06 56.2 59 49.2
BcaC02g09163 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-06 56.2 78 41.0
BolC4t25485H Brassica oleracea HOM05D000675 ORTHO05D000395 1.9e-06 55.5 60 50.0
BcaB08g36477 Brassica carinata HOM05D000675 ORTHO05D013785 2.5e-06 55.1 31 71.0
BolC8t47199H Brassica oleracea HOM05D000675 ORTHO05D000395 2.5e-06 55.1 60 43.3
BraA01t02215Z Brassica rapa HOM05D000675 ORTHO05D003044 2.5e-06 55.1 33 69.7
BcaC08g43526 Brassica carinata HOM05D000675 ORTHO05D000395 4.2e-06 54.3 60 45.0
BolC6t35994H Brassica oleracea HOM05D000675 ORTHO05D000395 4.2e-06 54.3 60 45.0


User provided reference genes

Program Settings