Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22359 Brassica carinata HOM05D000237 ORTHO05D094207 1.4e-57 226.1 116 100.0
Thhalv10013078m.g Eutrema salsugineum HOM05D000237 ORTHO05D000535 9.1e-17 90.5 64 73.4
AL8G33700 Arabidopsis lyrata HOM05D000237 ORTHO05D000535 2.7e-16 89.0 64 71.9
Carub.0008s1818 Capsella rubella HOM05D000237 ORTHO05D000535 7.7e-16 87.4 64 70.3
AT5G57670 Arabidopsis thaliana HOM05D000237 ORTHO05D000535 1.3e-15 86.7 64 70.3
Aa31LG3G13510 Aethionema arabicum HOM05D000237 ORTHO05D000535 2.2e-15 85.9 64 70.3
BcaB08g36125 Brassica carinata HOM05D000237 ORTHO05D000535 8.5e-15 84.0 64 67.2
BcaC04g19938 Brassica carinata HOM05D000237 ORTHO05D000535 1.9e-14 82.8 64 67.2
A10p15080 Brassica napus HOM05D000237 ORTHO05D000535 1.9e-14 82.8 64 67.2
C09p49570 Brassica napus HOM05D000237 ORTHO05D000535 1.9e-14 82.8 64 67.2
BolC9t57810H Brassica oleracea HOM05D000237 ORTHO05D000535 1.9e-14 82.8 64 67.2
CARHR271430 Cardamine hirsuta HOM05D000237 ORTHO05D000535 4.2e-14 81.6 64 65.6
THA.LOC104811813 Tarenaya hassleriana HOM05D000237 ORTHO05D000535 3.0e-12 75.5 64 57.8
Dinv41286 Davidia involucrata HOM05D000237 ORTHO05D000535 1.9e-06 56.2 69 43.5
Gohir.D04G085500 Gossypium hirsutum HOM05D000237 ORTHO05D000535 1.9e-06 56.2 71 45.1
Lj9C691G0 Lonicera japonica HOM05D000237 ORTHO05D000535 4.2e-06 55.1 67 41.8
Ciclev10007784m.g Citrus clementina HOM05D000237 ORTHO05D000535 9.5e-06 53.9 57 49.1


User provided reference genes

Program Settings