Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22335 Brassica carinata HOM05D004714 ORTHO05D005614 1.3e-73 279.6 139 100.0
BcaB08g36090 Brassica carinata HOM05D004714 ORTHO05D005614 7.2e-53 210.7 134 79.9
BraA10t43556Z Brassica rapa HOM05D004714 ORTHO05D005614 9.5e-53 210.3 134 79.9
C03p15050 Brassica napus HOM05D004714 ORTHO05D005614 1.6e-52 209.5 134 79.1
BolC3t13947H Brassica oleracea HOM05D004714 ORTHO05D005614 1.6e-52 209.5 134 79.1
Sp6g19030 Schrenkiella parvula HOM05D004714 ORTHO05D005614 3.6e-52 208.4 134 79.1
BcaC04g19980 Brassica carinata HOM05D004714 ORTHO05D005614 4.7e-52 208.0 134 79.1
C09p49140 Brassica napus HOM05D004714 ORTHO05D005614 4.7e-52 208.0 134 79.1
BcaB01g04462 Brassica carinata HOM05D004714 ORTHO05D005614 6.1e-52 207.6 134 78.4
AL8G33270 Arabidopsis lyrata HOM05D004714 ORTHO05D005614 8.0e-52 207.2 134 78.4
AT5G57300 Arabidopsis thaliana HOM05D004714 ORTHO05D005614 8.0e-52 207.2 134 78.4
A10p14730 Brassica napus HOM05D004714 ORTHO05D005614 1.0e-51 206.8 134 78.4
BolC9t57763H Brassica oleracea HOM05D004714 ORTHO05D005614 1.0e-51 206.8 134 78.4
Thhalv10014276m.g Eutrema salsugineum HOM05D004714 ORTHO05D005614 1.4e-51 206.5 134 77.6
CARHR271100 Cardamine hirsuta HOM05D004714 ORTHO05D005614 3.0e-51 205.3 134 77.6
BraA03t10598Z Brassica rapa HOM05D004714 ORTHO05D005614 5.2e-51 204.5 134 76.9
A03p12900 Brassica napus HOM05D004714 ORTHO05D005614 1.5e-50 203.0 134 76.1
Carub.0008s1781 Capsella rubella HOM05D004714 ORTHO05D005614 1.5e-50 203.0 134 76.9
Aa31LG3G13180 Aethionema arabicum HOM05D004714 ORTHO05D005614 2.9e-49 198.7 134 75.4
THA.LOC104802911 Tarenaya hassleriana HOM05D004714 ORTHO05D005614 1.8e-48 196.1 134 74.6
BcaC03g14165 Brassica carinata HOM05D004714 ORTHO05D005614 9.2e-48 193.7 134 74.6
C02p14380 Brassica napus HOM05D004714 ORTHO05D005614 9.2e-48 193.7 134 74.6
BolC2t07562H Brassica oleracea HOM05D004714 ORTHO05D005614 9.2e-48 193.7 134 74.6
MSTRG.10455 Avicennia marina HOM05D004714 ORTHO05D005614 1.4e-43 179.9 135 67.4
A02p08610 Brassica napus HOM05D004714 ORTHO05D005614 6.8e-43 177.6 117 76.9
SGA_v2.0_scaffold63G21841 Striga asiatica HOM05D004714 ORTHO05D005614 2.0e-42 176.0 135 65.2
PGR142G4249 Punica granatum HOM05D004714 ORTHO05D005614 3.4e-42 175.3 135 64.4
Cc05_g03940 Coffea canephora HOM05D004714 ORTHO05D005614 5.8e-42 174.5 135 64.4
Oeu031756.1 Olea europaea HOM05D004714 ORTHO05D005614 9.8e-42 173.7 135 65.2
Cpa.g.sc173.21 Carica papaya HOM05D004714 ORTHO05D005614 2.9e-41 172.2 134 63.4
FAN17G0676 Fragaria x ananassa HOM05D004714 ORTHO05D005614 3.7e-41 171.8 135 64.4
FAN07G0359 Fragaria x ananassa HOM05D004714 ORTHO05D005614 4.9e-41 171.4 135 63.7
unitig_8.g4678 Utricularia gibba HOM05D004714 ORTHO05D005614 4.9e-41 171.4 135 65.9
Ciclev10009101m.g Citrus clementina HOM05D004714 ORTHO05D005614 1.1e-40 170.2 135 65.9
FvH4_4g07660 Fragaria vesca HOM05D004714 ORTHO05D005614 1.1e-40 170.2 135 63.7
FAN12G0160 Fragaria x ananassa HOM05D004714 ORTHO05D005614 1.1e-40 170.2 135 63.7
Migut.L01902 Erythranthe guttata HOM05D004714 ORTHO05D005614 1.4e-40 169.9 135 65.2
Actinidia25713 Actinidia chinensis HOM05D004714 ORTHO05D005614 2.4e-40 169.1 135 63.7
Potri.018G088400 Populus trichocarpa HOM05D004714 ORTHO05D005614 2.4e-40 169.1 135 62.2
RcHm_v2.0_Chr4g0400471 Rosa chinensis HOM05D004714 ORTHO05D005614 2.4e-40 169.1 135 63.7
Aqoxy7G03018 Aquilegia oxysepala HOM05D004714 ORTHO05D005614 4.1e-40 168.3 136 66.2
Aqoxy7G03753 Aquilegia oxysepala HOM05D004714 ORTHO05D005614 4.1e-40 168.3 137 66.4
CsaV3_1G012970 Cucumis sativus L. HOM05D004714 ORTHO05D005614 4.1e-40 168.3 135 63.7
Duzib160G0192 Durio zibethinus HOM05D004714 ORTHO05D005614 4.1e-40 168.3 135 63.0
MD13G1245000 Malus domestica HOM05D004714 ORTHO05D005614 4.1e-40 168.3 135 63.7
Peaxi162Scf00907g00027 Petunia axillaris HOM05D004714 ORTHO05D005614 4.1e-40 168.3 135 62.2
Haze_14511 Corylus avellana HOM05D004714 ORTHO05D005614 7.0e-40 167.5 135 63.0
PSO541G2874 Papaver somniferum HOM05D004714 ORTHO05D005614 7.0e-40 167.5 135 63.7
Rhsim05G0122400 Rhododendron simsii HOM05D004714 ORTHO05D005614 7.0e-40 167.5 135 64.4
CiPaw.08G034200 Carya illinoinensis HOM05D004714 ORTHO05D005614 9.2e-40 167.2 135 63.0
TAR623G1076 Trochodendron aralioides HOM05D004714 ORTHO05D005614 9.2e-40 167.2 135 63.0
ECA236G1620 Erigeron canadensis HOM05D004714 ORTHO05D005614 1.2e-39 166.8 135 63.0
CAN.G992.24 Capsicum annuum HOM05D004714 ORTHO05D005614 1.6e-39 166.4 135 62.2
Manes.14G158566 Manihot esculenta HOM05D004714 ORTHO05D005614 1.6e-39 166.4 135 62.2
Prupe.1G079700 Prunus persica HOM05D004714 ORTHO05D005614 1.6e-39 166.4 135 63.0
Sc24g0003530 Simmondsia chinensis HOM05D004714 ORTHO05D005614 1.6e-39 166.4 135 60.7
Sabra18G0076900 Salix brachista HOM05D004714 ORTHO05D005614 2.0e-39 166.0 135 62.2
Sopen01g033030 Solanum pennellii HOM05D004714 ORTHO05D005614 2.0e-39 166.0 135 62.2
MELO3C005041.2 Cucumis melo HOM05D004714 ORTHO05D005614 2.7e-39 165.6 135 63.0
Gohir.A08G018200 Gossypium hirsutum HOM05D004714 ORTHO05D005614 2.7e-39 165.6 135 61.5
Gohir.D08G028800 Gossypium hirsutum HOM05D004714 ORTHO05D005614 2.7e-39 165.6 135 61.5
PSO675G7537 Papaver somniferum HOM05D004714 ORTHO05D005614 2.7e-39 165.6 135 62.2
Eucgr.I01084 Eucalyptus grandis HOM05D004714 ORTHO05D005614 3.5e-39 165.2 135 62.2
QL08p018134 Quercus lobata HOM05D004714 ORTHO05D005614 3.5e-39 165.2 135 63.0
Solyc01g081470.4 Solanum lycopersicum HOM05D004714 ORTHO05D005614 3.5e-39 165.2 135 61.5
Duzib168G0788 Durio zibethinus HOM05D004714 ORTHO05D005614 6.0e-39 164.5 135 61.5
RcHm_v2.0_Chr4g0400331 Rosa chinensis HOM05D004714 ORTHO05D005614 7.8e-39 164.1 135 62.2
Atru.chr7.820 Acer truncatum HOM05D004714 ORTHO05D005614 1.0e-38 163.7 135 60.7
CSS0001667 Camellia sinensis var. sinensis HOM05D004714 ORTHO05D005614 1.0e-38 163.7 135 63.0
HanXRQChr06g0179551 Helianthus annuus HOM05D004714 ORTHO05D005614 1.0e-38 163.7 135 63.0
CANSAT11G1559 Cannabis sativa HOM05D004714 ORTHO05D005614 1.7e-38 162.9 135 61.5
Lj7C659G12 Lonicera japonica HOM05D004714 ORTHO05D005614 1.7e-38 162.9 135 61.5
Dinv25399 Davidia involucrata HOM05D004714 ORTHO05D005614 2.3e-38 162.5 135 59.3
RcHm_v2.0_Chr4g0400601 Rosa chinensis HOM05D004714 ORTHO05D005614 3.9e-38 161.8 135 61.5
Sed0009644 Sechium edule HOM05D004714 ORTHO05D005614 3.9e-38 161.8 135 60.0
Thecc.09G180100 Theobroma cacao HOM05D004714 ORTHO05D005614 3.9e-38 161.8 135 60.0
TWI32G1166 Tripterygium wilfordii HOM05D004714 ORTHO05D005614 3.9e-38 161.8 135 60.7
COL.COLO4_36489 Corchorus olitorius HOM05D004714 ORTHO05D005614 5.0e-38 161.4 134 59.0
QL11p004848 Quercus lobata HOM05D004714 ORTHO05D005614 5.0e-38 161.4 135 61.5
Lsat_1_v5_gn_8_69561 Lactuca sativa HOM05D004410 ORTHO05D005614 6.6e-38 161.0 135 60.7
Lj7A660G39 Lonicera japonica HOM05D004714 ORTHO05D005614 8.6e-38 160.6 149 57.7
MBI07_g09259_MAGBIO Magnolia biondii HOM05D004714 ORTHO05D005614 8.6e-38 160.6 135 60.0
SalBow4G0166 Salvia bowleyana HOM05D004714 ORTHO05D005614 8.6e-38 160.6 135 60.7
Psat7g257720 Pisum sativum HOM05D004714 ORTHO05D005614 1.1e-37 160.2 135 60.7
Medtr4g009880 Medicago truncatula HOM05D004714 ORTHO05D005614 1.5e-37 159.8 135 60.7
Lalb_Chr01g0012111 Lupinus albus HOM05D004714 ORTHO05D005614 1.9e-37 159.5 135 60.7
vmacro19765 Vaccinium macrocarpon HOM05D004714 ORTHO05D005614 1.9e-37 159.5 144 60.4
Ca_12516_v3 Cicer arietinum L. HOM05D004714 ORTHO05D005614 2.5e-37 159.1 135 58.5
Gorai.004G025900 Gossypium raimondii HOM05D004714 ORTHO05D005614 2.5e-37 159.1 165 52.7
PGSC0003DMG400031122 Solanum tuberosum HOM05D004714 ORTHO05D005614 2.5e-37 159.1 135 60.7
SalBow4G0136 Salvia bowleyana HOM05D004714 ORTHO05D005614 3.3e-37 158.7 135 60.0
DCAR_002998 Daucus carota HOM05D004714 ORTHO05D005614 5.6e-37 157.9 135 60.0
Nitab4.5_0000792g0180 Nicotiana tabacum HOM05D004714 ORTHO05D005614 5.6e-37 157.9 135 59.3
Duzib168G1985 Durio zibethinus HOM05D004714 ORTHO05D005614 9.5e-37 157.1 134 59.0
Lj3g0005475 Lotus japonicus HOM05D004714 ORTHO05D005614 9.5e-37 157.1 135 59.3
Nitab4.5_0006785g0020 Nicotiana tabacum HOM05D004714 ORTHO05D005614 9.5e-37 157.1 135 58.5
AUR62014206 Chenopodium quinoa HOM05D004714 ORTHO05D005614 1.2e-36 156.8 135 61.5
TWI34G0504 Tripterygium wilfordii HOM05D004714 ORTHO05D005614 1.2e-36 156.8 134 59.0
HanXRQChr05g0138351 Helianthus annuus HOM05D004714 ORTHO05D005614 2.1e-36 156.0 135 60.0
Os01g0976600 Oryza sativa ssp. japonica HOM05D004714 ORTHO05D005614 2.1e-36 156.0 134 59.0
EL10Ac6g14222 Beta vulgaris HOM05D004714 ORTHO05D005614 2.8e-36 155.6 135 60.0
ClCG03G002280 Citrullus lanatus HOM05D004714 ORTHO05D005614 2.8e-36 155.6 135 60.7
GSVIVG01024342001 Vitis vinifera HOM05D004714 ORTHO05D005614 3.6e-36 155.2 135 57.0
ATR0686G131 Amborella trichopoda HOM05D004714 ORTHO05D005614 8.1e-36 154.1 136 58.1
Zm00001eb362110 Zea mays HOM05D004714 ORTHO05D005614 8.1e-36 154.1 134 57.5
AUR62041230 Chenopodium quinoa HOM05D004714 ORTHO05D005614 1.1e-35 153.7 135 60.0
TPR.G38676 Trifolium pratense HOM05D004714 ORTHO05D005614 1.4e-35 153.3 135 59.3
Glyma.08G214400 Glycine max HOM05D004714 ORTHO05D005614 1.8e-35 152.9 135 57.8
Nn4g22433 Nelumbo nucifera HOM05D004714 ORTHO05D005614 1.8e-35 152.9 135 55.6
Phvul.010G157500 Phaseolus vulgaris HOM05D004714 ORTHO05D005614 1.8e-35 152.9 135 57.8
VMungo0331G1132 Vigna mungo HOM05D004714 ORTHO05D005614 2.3e-35 152.5 135 57.0
Zm00001eb398140 Zea mays HOM05D004714 ORTHO05D005614 2.3e-35 152.5 134 58.2
arahy.Tifrunner.gnm1.ann1.72XQC0 Arachis hypogaea HOM05D004714 ORTHO05D005614 4.0e-35 151.8 135 56.3
arahy.Tifrunner.gnm1.ann1.ZK581Z Arachis hypogaea HOM05D004714 ORTHO05D005614 4.0e-35 151.8 135 56.3
Glyma.07G028400 Glycine max HOM05D004714 ORTHO05D005614 5.2e-35 151.4 135 57.0
Nn3g18335 Nelumbo nucifera HOM05D004714 ORTHO05D005614 6.8e-35 151.0 135 56.3
HPP92_017314 Vanilla planifolia HOM05D004714 ORTHO05D005614 1.5e-34 149.8 134 54.5
Thecc.09G241900 Theobroma cacao HOM05D004714 ORTHO05D005614 2.6e-34 149.1 134 56.7
RcHm_v2.0_Chr4g0400411 Rosa chinensis HOM05D004714 ORTHO05D005614 5.8e-34 147.9 136 60.3
MD03G1036000 Malus domestica HOM05D004714 ORTHO05D005614 1.3e-33 146.7 97 73.2
BraA02t05930Z Brassica rapa HOM05D004714 ORTHO05D005614 4.9e-33 144.8 103 71.8
SEGI_34543 Sequoiadendron giganteum HOM05D004714 ORTHO05D005614 3.2e-32 142.1 136 52.9
SHI02880 Sapria himalayana HOM05D004714 ORTHO05D005614 4.1e-32 141.7 134 53.0
Pp3c3_21690 Physcomitrium patens HOM05D004714 ORTHO05D005614 2.1e-31 139.4 139 52.5
CDE02G3847 Ceratophyllum demersum HOM05D004714 ORTHO05D005614 3.9e-30 135.2 135 50.4
QL05p067644 Quercus lobata HOM05D004714 ORTHO05D005614 5.1e-30 134.8 97 71.1
Mapoly0052s0093 Marchantia polymorpha HOM05D004714 ORTHO05D005614 6.6e-30 134.4 137 54.7
AagrBONN_evm.TU.Sc2ySwM_117.468 Anthoceros agrestis HOM05D004714 ORTHO05D005614 8.6e-30 134.0 137 47.4
Ca_12517_v3 Cicer arietinum L. HOM05D004714 ORTHO05D005614 2.5e-29 132.5 97 66.0
SMO115G0141 Selaginella moellendorffii HOM05D004714 ORTHO05D005614 2.5e-29 132.5 158 48.1
Rhsim08G0112000 Rhododendron simsii HOM05D004714 ORTHO05D005614 3.3e-29 132.1 97 70.1
CSS0022683 Camellia sinensis var. sinensis HOM05D004714 ORTHO05D005614 7.3e-29 131.0 94 70.2
CBR_g3967 Chara braunii HOM05D004714 ORTHO05D005614 1.7e-22 109.8 138 42.0
Oeu015328.1 Olea europaea HOM05D004714 ORTHO05D005614 3.9e-22 108.6 62 82.3
Dinv25435 Davidia involucrata HOM05D004714 ORTHO05D005614 1.5e-21 106.7 134 44.0
RcHm_v2.0_Chr4g0400661 Rosa chinensis HOM05D004714 ORTHO05D005614 1.1e-19 100.5 98 53.1
PRCOL_00006789 Prasinoderma coloniale HOM05D004714 ORTHO05D005614 1.2e-15 87.0 141 39.7
COL.COLO4_25457 Corchorus olitorius HOM05D004714 ORTHO05D005614 1.6e-15 86.7 134 41.0
DCAR_003032 Daucus carota HOM05D004714 ORTHO05D005614 5.6e-13 78.2 134 38.1
SGA_v2.0_scaffold905G53712 Striga asiatica HOM05D004714 ORTHO05D005614 8.1e-12 74.3 132 37.9
MCO01G546 Micromonas commoda HOM05D004714 ORTHO05D005614 1.8e-11 73.2 143 33.6
Haze_26398 Corylus avellana HOM05D004714 ORTHO05D005614 4.0e-11 72.0 138 36.2
Cre05.g245450 Chlamydomonas reinhardtii HOM05D004714 ORTHO05D005614 1.2e-10 70.5 71 52.1
Zm00001eb302180 Zea mays HOM05D004714 ORTHO05D005614 1.2e-10 70.5 51 62.7
MSTRG.2407 Avicennia marina HOM05D005748 ORTHO05D007123 1.7e-06 56.6 132 26.5
Migut.E00183 Erythranthe guttata HOM05D005748 ORTHO05D007123 2.3e-06 56.2 134 26.9
DCAR_021512 Daucus carota HOM05D005748 ORTHO05D007123 6.6e-06 54.7 134 26.9


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