Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22279 Brassica carinata HOM05D000867 ORTHO05D000864 2.2e-122 442.2 204 100.0
C02p15180 Brassica napus HOM05D000867 ORTHO05D000864 7.3e-78 294.3 213 71.8
BolC2t07635H Brassica oleracea HOM05D000867 ORTHO05D000864 5.2e-76 288.1 213 70.4
Sp6g18310 Schrenkiella parvula HOM05D000867 ORTHO05D000864 2.4e-73 279.3 226 65.9
BcaC03g14218 Brassica carinata HOM05D000867 ORTHO05D000864 2.1e-72 276.2 227 65.2
Thhalv10015278m.g Eutrema salsugineum HOM05D000867 ORTHO05D000864 6.0e-72 274.6 222 65.8
A02p09040 Brassica napus HOM05D000867 ORTHO05D000864 7.3e-70 267.7 206 68.0
BraA02t05973Z Brassica rapa HOM05D000867 ORTHO05D000864 7.3e-70 267.7 206 68.0
BolC3t13999H Brassica oleracea HOM05D000867 ORTHO05D000864 4.9e-58 228.4 215 59.1
C03p15620 Brassica napus HOM05D000867 ORTHO05D000864 1.1e-57 227.3 215 58.6
AL8G32270 Arabidopsis lyrata HOM05D000867 ORTHO05D000864 2.1e-56 223.0 235 55.3
BcaC01g06429 Brassica carinata HOM05D000867 ORTHO05D000864 3.5e-56 222.2 215 58.1
Carub.0008s1699 Capsella rubella HOM05D000867 ORTHO05D000864 3.9e-55 218.8 234 55.1
AT5G56510 Arabidopsis thaliana HOM05D000867 ORTHO05D000864 3.7e-53 212.2 216 54.6
BraA03t10645Z Brassica rapa HOM05D000867 ORTHO05D000864 2.2e-50 203.0 215 55.8
A03p13390 Brassica napus HOM05D000867 ORTHO05D000864 2.9e-50 202.6 215 55.3
C09p48100 Brassica napus HOM05D000867 ORTHO05D000864 3.2e-49 199.1 207 58.0
BolC9t57658H Brassica oleracea HOM05D000867 ORTHO05D000864 3.2e-49 199.1 207 58.0
BcaC04g20082 Brassica carinata HOM05D000867 ORTHO05D000864 4.2e-49 198.7 207 58.0
A10p13870 Brassica napus HOM05D000867 ORTHO05D000864 2.0e-43 179.9 204 52.9
BraA10t43480Z Brassica rapa HOM05D000867 ORTHO05D000864 2.0e-43 179.9 204 52.9
BcaB01g04404 Brassica carinata HOM05D000867 ORTHO05D000864 1.0e-39 167.5 209 51.2
Aa31LG3G12380 Aethionema arabicum HOM05D000867 ORTHO05D000864 5.1e-39 165.2 231 46.3
THA.LOC104811720 Tarenaya hassleriana HOM05D000867 ORTHO05D000864 1.1e-33 147.5 250 38.0
CARHR270150 Cardamine hirsuta HOM05D000867 ORTHO05D000864 8.8e-31 137.9 208 48.1
Potri.001G002600 Populus trichocarpa HOM05D000867 ORTHO05D000864 9.1e-12 74.7 267 28.8
Potri.003G222300 Populus trichocarpa HOM05D000867 ORTHO05D000864 4.7e-08 62.4 266 26.7
Sabra01G0001900 Salix brachista HOM05D000867 ORTHO05D000864 4.7e-08 62.4 273 27.1
QL01p010635 Quercus lobata HOM05D000867 ORTHO05D000864 3.0e-07 59.7 264 23.9
Sabra03G0165300 Salix brachista HOM05D000867 ORTHO05D000864 8.8e-07 58.2 266 25.6


User provided reference genes

Program Settings