Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22251 Brassica carinata HOM05D003788 ORTHO05D004633 0.0e+00 1774.6 996 100.0
C02p15420 Brassica napus HOM05D003788 ORTHO05D004633 0.0e+00 1182.5 1015 72.4
BolC2t07656H Brassica oleracea HOM05D003788 ORTHO05D004633 0.0e+00 1182.5 1015 72.4
A02p09290 Brassica napus HOM05D003788 ORTHO05D004633 0.0e+00 1142.1 1022 70.6
BraA02t05991Z Brassica rapa HOM05D003788 ORTHO05D004633 0.0e+00 1117.4 1023 69.9
AL8G31870 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 0.0e+00 1094.3 1068 63.6
Thhalv10012573m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 2.0e-306 1055.8 1069 63.3
Carub.0008s1656 Capsella rubella HOM05D003788 ORTHO05D004633 9.4e-304 1047.0 1078 61.2
AT5G56240 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 2.1e-303 1045.8 1068 62.2
AL191U10030 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 3.8e-297 1025.0 1064 61.1
Sp6g18090 Schrenkiella parvula HOM05D003788 ORTHO05D004633 3.3e-288 995.3 895 68.7
C09p47480 Brassica napus HOM05D003788 ORTHO05D004633 5.9e-282 974.5 1041 60.9
BolC9t57603H Brassica oleracea HOM05D003788 ORTHO05D004633 7.3e-280 967.6 1044 61.3
A10p13490 Brassica napus HOM05D003788 ORTHO05D004633 2.0e-274 949.5 1050 60.7
BraA10t43453Z Brassica rapa HOM05D003788 ORTHO05D004633 7.8e-274 947.6 1050 60.6
BcaC04g20117 Brassica carinata HOM05D003788 ORTHO05D004633 1.7e-273 946.4 1040 60.6
BraA03t10668Z Brassica rapa HOM05D003788 ORTHO05D004633 8.6e-273 944.1 1037 62.9
A03p13640 Brassica napus HOM05D003788 ORTHO05D004633 1.5e-272 943.3 1041 65.1
BcaC03g14236 Brassica carinata HOM05D003788 ORTHO05D004633 1.1e-267 927.2 855 70.1
BcaC01g06409 Brassica carinata HOM05D003788 ORTHO05D004633 2.3e-262 909.4 1030 59.7
C03p15990 Brassica napus HOM05D003788 ORTHO05D004633 3.4e-261 905.6 1028 59.8
BolC3t14027H Brassica oleracea HOM05D003788 ORTHO05D004633 3.5e-258 895.6 1030 59.1
BcaB01g04386 Brassica carinata HOM05D003788 ORTHO05D004633 6.4e-252 874.8 1035 60.2
CARHR269640 Cardamine hirsuta HOM05D003788 ORTHO05D004633 2.8e-231 806.2 1029 53.1
Aa31LG3G12140 Aethionema arabicum HOM05D003788 ORTHO05D004633 3.2e-179 633.3 1127 45.8
THA.LOC104811704 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 1.9e-118 431.4 1106 37.8
Thhalv10012702m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 5.3e-105 386.7 1060 37.6
CARHR269650 Cardamine hirsuta HOM05D003788 ORTHO05D004633 1.6e-101 375.2 1036 37.3
AL8G31880 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 4.6e-101 373.6 1049 36.6
Sp6g18100 Schrenkiella parvula HOM05D003788 ORTHO05D004633 2.2e-98 364.8 1047 36.0
Carub.0008s1657 Capsella rubella HOM05D003788 ORTHO05D004633 3.4e-96 357.5 1043 36.0
AT5G56250 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 6.7e-92 343.2 1015 36.7
BcaC01g06410 Brassica carinata HOM05D003788 ORTHO05D004633 4.1e-89 334.0 1007 35.5
BolC3t14026H Brassica oleracea HOM05D003788 ORTHO05D004633 5.0e-87 327.0 1014 35.3
C03p15980 Brassica napus HOM05D003788 ORTHO05D004633 1.1e-86 325.9 1003 34.5
A03p13630 Brassica napus HOM05D003788 ORTHO05D004633 3.0e-84 317.8 1004 35.0
BraA03t10667Z Brassica rapa HOM05D003788 ORTHO05D004633 1.5e-83 315.5 1004 34.5
BcaB05g22252 Brassica carinata HOM05D003788 ORTHO05D004633 3.7e-82 310.8 967 35.7
BcaB01g04387 Brassica carinata HOM05D003788 ORTHO05D004633 1.1e-81 309.3 1003 33.3
C02p15400 Brassica napus HOM05D003788 ORTHO05D004633 2.5e-78 298.1 1005 33.2
A02p09250 Brassica napus HOM05D003788 ORTHO05D004633 1.4e-76 292.4 981 33.7
BolC2t07655H Brassica oleracea HOM05D003788 ORTHO05D004633 1.8e-76 292.0 968 33.2
BcaC03g14234 Brassica carinata HOM05D003788 ORTHO05D004633 5.2e-76 290.4 968 33.2
C09p47500 Brassica napus HOM05D003788 ORTHO05D004633 1.3e-55 222.6 777 32.4
MD11G1046500 Malus domestica HOM05D003788 ORTHO05D004633 5.9e-48 197.2 1191 26.3
Rhsim06G0235500 Rhododendron simsii HOM05D003788 ORTHO05D004633 6.6e-47 193.7 1245 25.2
Duzib268G1743 Durio zibethinus HOM05D003788 ORTHO05D004633 4.3e-46 191.0 1271 26.4
Ciclev10007254m.g Citrus clementina HOM05D003788 ORTHO05D004633 2.1e-45 188.7 1191 26.4
MD03G1043400 Malus domestica HOM05D003788 ORTHO05D004633 1.5e-43 182.6 1188 26.1
CSS0001498 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 2.6e-43 181.8 1150 26.1
FAN21G2445 Fragaria x ananassa HOM05D003788 ORTHO05D004633 2.6e-43 181.8 1248 26.2
CSS0046183 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 3.4e-43 181.4 1151 26.1
FAN16G1134 Fragaria x ananassa HOM05D003788 ORTHO05D004633 1.7e-42 179.1 1253 25.1
Atru.chr2.3902 Acer truncatum HOM05D003788 ORTHO05D004633 3.7e-42 177.9 1269 25.1
CSS0022631 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 3.2e-41 174.9 1182 25.5
FAN11G0056 Fragaria x ananassa HOM05D003788 ORTHO05D004633 4.1e-41 174.5 1239 25.4
GSVIVG01014849001 Vitis vinifera HOM05D003788 ORTHO05D004633 9.2e-41 173.3 1062 26.0
Potri.001G472400 Populus trichocarpa HOM05D003788 ORTHO05D004633 1.2e-40 172.9 1265 25.5
Potri.011G169100 Populus trichocarpa HOM05D003788 ORTHO05D004633 1.2e-40 172.9 1244 27.1
FvH4_3g41530 Fragaria vesca HOM05D003788 ORTHO05D004633 2.7e-40 171.8 1237 25.4
BcaC03g14237 Brassica carinata HOM05D003788 ORTHO05D004633 4.6e-40 171.0 141 65.2
Manes.05G204500 Manihot esculenta HOM05D003788 ORTHO05D004633 1.0e-39 169.9 1257 25.9
THA.LOC104822683 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 1.0e-39 169.9 1057 27.5
Gohir.A13G128300 Gossypium hirsutum HOM05D003788 ORTHO05D004633 1.3e-39 169.5 1291 25.6
FAN25G3203 Fragaria x ananassa HOM05D003788 ORTHO05D004633 1.7e-39 169.1 1270 25.4
Gorai.013G147700 Gossypium raimondii HOM05D003788 ORTHO05D004633 2.3e-39 168.7 1294 25.5
Thecc.07G001100 Theobroma cacao HOM05D003788 ORTHO05D004633 3.0e-39 168.3 1269 25.9
Gohir.D08G036500 Gossypium hirsutum HOM05D003788 ORTHO05D004633 1.5e-38 166.0 1172 26.1
Gohir.D13G131700 Gossypium hirsutum HOM05D003788 ORTHO05D004633 1.9e-38 165.6 1301 25.2
Prupe.6G035800 Prunus persica HOM05D003788 ORTHO05D004633 2.5e-38 165.2 1235 26.0
Manes.01G007100 Manihot esculenta HOM05D003788 ORTHO05D004633 3.3e-38 164.9 1257 25.0
CANSAT11G0655 Cannabis sativa HOM05D003788 ORTHO05D004633 7.3e-38 163.7 1299 24.5
PGSC0003DMG400022144 Solanum tuberosum HOM05D003788 ORTHO05D004633 7.3e-38 163.7 1221 25.3
Gohir.A08G026000 Gossypium hirsutum HOM05D003788 ORTHO05D004633 1.2e-37 162.9 1148 26.3
RcHm_v2.0_Chr5g0074531 Rosa chinensis HOM05D003788 ORTHO05D004633 1.6e-37 162.5 1233 24.6
Gorai.004G034500 Gossypium raimondii HOM05D003788 ORTHO05D004633 2.8e-37 161.8 1159 25.3
Peaxi162Scf00232g00078 Petunia axillaris HOM05D003788 ORTHO05D004633 3.6e-37 161.4 1076 26.0
PGR031G1033 Punica granatum HOM05D003788 ORTHO05D004633 3.6e-37 161.4 1102 26.0
BcaC04g20115 Brassica carinata HOM05D003788 ORTHO05D004633 1.4e-36 159.5 647 31.1
BolC9t57606H Brassica oleracea HOM05D003788 ORTHO05D004633 1.4e-36 159.5 647 31.1
Sabra16G0320700 Salix brachista HOM05D003788 ORTHO05D004633 3.1e-36 158.3 1304 25.1
Sopen07g034380 Solanum pennellii HOM05D003788 ORTHO05D004633 6.8e-36 157.1 1229 24.7
Sabra11G0137700 Salix brachista HOM05D003788 ORTHO05D004633 1.2e-35 156.4 1269 24.5
Solyc07g066200.4 Solanum lycopersicum HOM05D003788 ORTHO05D004633 1.5e-35 156.0 1185 24.5
Eucgr.F01984 Eucalyptus grandis HOM05D003788 ORTHO05D004633 4.4e-35 154.5 1255 24.1
Duzib213G0477 Durio zibethinus HOM05D003788 ORTHO05D004633 7.5e-35 153.7 1249 24.9
COL.COLO4_07793 Corchorus olitorius HOM05D003788 ORTHO05D004633 1.7e-34 152.5 1202 24.9
A10p13510 Brassica napus HOM05D003788 ORTHO05D004633 3.7e-34 151.4 701 30.5
CiPaw.11G210900 Carya illinoinensis HOM05D003788 ORTHO05D004633 1.1e-33 149.8 1260 24.6
Dinv19640 Davidia involucrata HOM05D003788 ORTHO05D004633 1.1e-33 149.8 1309 24.4
TWI39G0992 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 1.9e-33 149.1 1233 25.4
Cfa016964 Carpinus fangiana HOM05D003788 ORTHO05D004633 3.2e-33 148.3 1245 24.1
Dinv40920 Davidia involucrata HOM05D003788 ORTHO05D004633 7.1e-33 147.1 1276 24.4
QL08p000460 Quercus lobata HOM05D003788 ORTHO05D004633 7.1e-33 147.1 1239 24.4
vmacro11644 Vaccinium macrocarpon HOM05D003788 ORTHO05D004633 9.2e-33 146.7 1154 24.5
Haze_09919 Corylus avellana HOM05D003788 ORTHO05D004633 1.3e-31 142.9 1182 23.9
TWI38G0822 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 5.1e-31 141.0 1224 25.8
HanXRQChr03g0079411 Helianthus annuus HOM05D003788 ORTHO05D004633 5.6e-30 137.5 988 24.8
THA.LOC104810306 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 5.6e-30 137.5 1157 25.6
Actinidia31533 Actinidia chinensis HOM05D003788 ORTHO05D004633 1.6e-29 136.0 1170 23.6
ClCG10G003840 Citrullus lanatus HOM05D003788 ORTHO05D004633 2.1e-29 135.6 1235 24.8
ClCG10G003960 Citrullus lanatus HOM05D003788 ORTHO05D004633 6.2e-29 134.0 1235 24.6
MELO3C014063.2 Cucumis melo HOM05D003788 ORTHO05D004633 8.1e-29 133.7 1269 24.6
CiPaw.12G143000 Carya illinoinensis HOM05D003788 ORTHO05D004633 2.3e-28 132.1 1003 23.8
CsaV3_3G003820 Cucumis sativus L. HOM05D003788 ORTHO05D004633 6.8e-28 130.6 1261 24.4
Nitab4.5_0001732g0050 Nicotiana tabacum HOM05D003788 ORTHO05D004633 4.4e-27 127.9 1172 24.0
Actinidia30347 Actinidia chinensis HOM05D003788 ORTHO05D004633 5.8e-27 127.5 366 32.8
MSTRG.16130 Avicennia marina HOM05D003788 ORTHO05D004633 9.9e-27 126.7 1209 23.1
Oeu015274.1 Olea europaea HOM05D003788 ORTHO05D004633 1.3e-26 126.3 1266 23.6
Migut.H01707 Erythranthe guttata HOM05D003788 ORTHO05D004633 3.2e-25 121.7 922 24.7
Oeu052883.2 Olea europaea HOM05D003788 ORTHO05D004633 3.2e-25 121.7 1240 23.5
TAR629G3040 Trochodendron aralioides HOM05D003788 ORTHO05D004633 1.2e-24 119.8 1313 24.2
Nitab4.5_0000152g0020 Nicotiana tabacum HOM05D003788 ORTHO05D004633 2.7e-24 118.6 1157 24.8
SGA_v2.0_scaffold11G05962 Striga asiatica HOM05D003788 ORTHO05D004633 3.5e-24 118.2 785 25.6
TWI14G1222 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 4.6e-24 117.9 514 29.4
ECA240G4117 Erigeron canadensis HOM05D003788 ORTHO05D004633 6.0e-24 117.5 963 25.1
Sed0023936 Sechium edule HOM05D003788 ORTHO05D004633 7.8e-24 117.1 1262 23.9
Duzib170G0482 Durio zibethinus HOM05D003788 ORTHO05D004633 1.3e-23 116.3 1195 24.1
ClCG00G001230 Citrullus lanatus HOM05D003788 ORTHO05D004633 2.3e-23 115.5 1263 24.1
Lj1A901G37 Lonicera japonica HOM05D003788 ORTHO05D004633 6.6e-23 114.0 1112 25.1
SalBow8G5584 Salvia bowleyana HOM05D003788 ORTHO05D004633 8.6e-23 113.6 1325 23.5
Sed0020897 Sechium edule HOM05D003788 ORTHO05D004633 1.1e-22 113.2 1190 23.9
HanXRQChr17g0546861 Helianthus annuus HOM05D003788 ORTHO05D004633 7.3e-22 110.5 983 25.4
MBI15_g35998_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 9.6e-22 110.2 499 26.7
BraA02t05990Z Brassica rapa HOM05D003788 ORTHO05D004633 2.8e-21 108.6 192 43.8
DCAR_013754 Daucus carota HOM05D003788 ORTHO05D004633 4.7e-21 107.8 1242 23.0
CARHR218680 Cardamine hirsuta HOM05D003788 ORTHO05D004633 1.1e-20 106.7 198 39.9
Cc05_g15760 Coffea canephora HOM05D003788 ORTHO05D004633 1.1e-20 106.7 501 26.9
MSTRG.7044 Avicennia marina HOM05D003788 ORTHO05D004633 1.4e-20 106.3 1216 24.2
AUR62017148 Chenopodium quinoa HOM05D003788 ORTHO05D004633 1.4e-20 106.3 439 29.2
Migut.M01579 Erythranthe guttata HOM05D003788 ORTHO05D004633 4.0e-20 104.8 407 28.7
AUR62035659 Chenopodium quinoa HOM05D003788 ORTHO05D004633 7.6e-19 100.5 435 29.7
Hma1.2p1_0321F.1_g124360 Hydrangea macrophylla HOM05D003788 ORTHO05D004633 7.6e-19 100.5 407 28.3
unitig_0.g982 Utricularia gibba HOM05D003788 ORTHO05D004633 7.6e-19 100.5 1021 24.3
Lsat_1_v5_gn_7_115701 Lactuca sativa HOM05D003788 ORTHO05D004633 9.9e-19 100.1 1026 23.7
Aqoxy4G02274 Aquilegia oxysepala HOM05D003788 ORTHO05D004633 1.3e-18 99.8 508 27.6
MSTRG.13048 Avicennia marina HOM05D003788 ORTHO05D004633 1.7e-18 99.4 937 23.8
ECA236G3073 Erigeron canadensis HOM05D003788 ORTHO05D004633 1.7e-18 99.4 1018 23.5
TAR626G0610 Trochodendron aralioides HOM05D003788 ORTHO05D004633 3.8e-18 98.2 476 27.7
Ah.04g166650 Amaranthus hybridus HOM05D003788 ORTHO05D004633 4.9e-18 97.8 1021 24.4
HanXRQChr11g0346921 Helianthus annuus HOM05D003788 ORTHO05D004633 1.1e-17 96.7 613 26.4
Cc05_g15750 Coffea canephora HOM05D003788 ORTHO05D004633 9.3e-17 93.6 292 32.2
Lsat_1_v5_gn_9_88661 Lactuca sativa HOM05D003788 ORTHO05D004633 1.6e-16 92.8 618 24.6
Os04g0471400 Oryza sativa ssp. japonica HOM05D003788 ORTHO05D004633 2.7e-16 92.0 1126 22.5
EL10Ac4g07522 Beta vulgaris HOM05D003788 ORTHO05D004633 1.7e-15 89.4 501 27.3
HPP92_015789 Vanilla planifolia HOM05D003788 ORTHO05D004633 2.3e-15 89.0 584 24.5
Actinidia30346 Actinidia chinensis HOM05D003788 ORTHO05D004633 3.0e-15 88.6 433 27.3
unitig_37.g12213 Utricularia gibba HOM05D003788 ORTHO05D004633 5.1e-15 87.8 1036 24.0
HPP92_022807 Vanilla planifolia HOM05D003788 ORTHO05D004633 1.9e-14 85.9 474 24.5
Sc03g0011790 Simmondsia chinensis HOM05D003788 ORTHO05D004633 5.6e-14 84.3 1081 23.5
Zm00001eb424700 Zea mays HOM05D003788 ORTHO05D004633 1.3e-13 83.2 1072 22.7
Zm00001eb079970 Zea mays HOM05D003788 ORTHO05D004633 1.6e-13 82.8 1123 22.9
CDE11G0275 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 2.1e-13 82.4 490 27.8
Lj8C184G1 Lonicera japonica HOM05D003788 ORTHO05D004633 4.8e-13 81.3 1123 22.3
TAR627G0146 Trochodendron aralioides HOM05D003788 ORTHO05D004633 1.1e-12 80.1 514 25.5
MBI14_g10253_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 3.1e-12 78.6 484 24.6
ATR0751G208 Amborella trichopoda HOM05D003788 ORTHO05D004633 5.3e-12 77.8 509 24.0
unitig_46.g18528 Utricularia gibba HOM05D003788 ORTHO05D004633 5.3e-12 77.8 1045 23.5
Cpa.g.sc12.61 Carica papaya HOM05D003788 ORTHO05D004633 1.2e-11 76.6 554 23.1
Hund23029 Selenicereus undatus HOM05D003788 ORTHO05D004633 1.2e-11 76.6 1208 23.7
BcaC03g16336 Brassica carinata HOM05D021359 ORTHO05D016065 2.0e-11 75.9 107 45.8
SGA_v2.0_scaffold7G03552 Striga asiatica HOM05D003788 ORTHO05D004633 9.9e-11 73.6 729 23.0
Nn1g07620 Nelumbo nucifera HOM05D003788 ORTHO05D004633 2.2e-10 72.4 1016 22.3
PSO782G4685 Papaver somniferum HOM05D003788 ORTHO05D004633 8.4e-10 70.5 937 22.9
CDE06G0258 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 2.1e-08 65.9 305 26.9


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