Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22114 Brassica carinata HOM05D007900 ORTHO05D010306 5.9e-26 120.2 64 100.0
BcaC03g14327 Brassica carinata HOM05D007900 ORTHO05D010306 1.0e-25 119.4 64 98.4
BolC2t07890H Brassica oleracea HOM05D007900 ORTHO05D010306 1.0e-25 119.4 64 98.4
BraA02t06116Z Brassica rapa HOM05D007900 ORTHO05D010306 1.0e-25 119.4 64 98.4
C02p17590 Brassica napus HOM05D007900 ORTHO05D010306 2.9e-25 117.9 64 96.9
A02p10530 Brassica napus HOM05D007900 ORTHO05D010306 8.6e-25 116.3 64 96.9
AT5G54145 Arabidopsis thaliana HOM05D007900 ORTHO05D010306 2.1e-23 111.7 64 90.6
Carub.0008s1444 Capsella rubella HOM05D007900 ORTHO05D010306 2.8e-23 111.3 64 90.6
BolC9t57306H Brassica oleracea HOM05D007900 ORTHO05D010306 1.4e-22 109.0 64 90.6
A10p11450 Brassica napus HOM05D007900 ORTHO05D010306 3.0e-22 107.8 64 89.1
BraA10t43239Z Brassica rapa HOM05D007900 ORTHO05D010306 3.0e-22 107.8 64 89.1
AL8G29280 Arabidopsis lyrata HOM05D007900 ORTHO05D010306 1.2e-21 105.9 64 90.6
BcaB08g35770 Brassica carinata HOM05D007900 ORTHO05D010306 1.2e-21 105.9 64 87.5
CARHR267340 Cardamine hirsuta HOM05D007900 ORTHO05D010306 9.8e-21 102.8 64 89.1
AL7G25030 Arabidopsis lyrata HOM05D007900 ORTHO05D010306 1.4e-19 99.0 64 84.4
Aa31LG3G9890 Aethionema arabicum HOM05D007900 ORTHO05D010306 2.4e-19 98.2 64 85.9
AT4G27657 Arabidopsis thaliana HOM05D007900 ORTHO05D010306 5.4e-19 97.1 64 81.2
A08p20370 Brassica napus HOM05D007900 ORTHO05D010306 2.0e-18 95.1 64 78.1
BraA08t33994Z Brassica rapa HOM05D007900 ORTHO05D010306 2.0e-18 95.1 64 78.1
BcaB03g12540 Brassica carinata HOM05D007900 ORTHO05D010306 2.7e-18 94.7 68 76.5
BcaC07g38290 Brassica carinata HOM05D007900 ORTHO05D010306 3.5e-18 94.4 64 78.1
C08p10370 Brassica napus HOM05D007900 ORTHO05D010306 3.5e-18 94.4 64 78.1
BolC8t48719H Brassica oleracea HOM05D007900 ORTHO05D010306 3.5e-18 94.4 64 78.1
BraA08t33997Z Brassica rapa HOM05D007900 ORTHO05D010306 4.6e-18 94.0 68 76.5
Thhalv10027389m.g Eutrema salsugineum HOM05D007900 ORTHO05D010306 5.9e-18 93.6 68 77.9
BolC8t48716H Brassica oleracea HOM05D007900 ORTHO05D010306 1.0e-17 92.8 68 75.0
AT4G27652 Arabidopsis thaliana HOM05D007900 ORTHO05D010306 2.3e-17 91.7 71 77.5
A03p57440 Brassica napus HOM05D007900 ORTHO05D010306 3.9e-17 90.9 64 79.7
BraA03t14811Z Brassica rapa HOM05D007900 ORTHO05D010306 3.9e-17 90.9 64 79.7
AL7G25060 Arabidopsis lyrata HOM05D007900 ORTHO05D010306 8.6e-17 89.7 70 77.1
Aa31LG1G13770 Aethionema arabicum HOM05D007900 ORTHO05D010306 1.1e-16 89.4 68 76.5
BcaB03g12542 Brassica carinata HOM05D007900 ORTHO05D010306 1.1e-16 89.4 64 79.7
CARHR235360 Cardamine hirsuta HOM05D007900 ORTHO05D010306 1.1e-16 89.4 68 75.0
C07p55650 Brassica napus HOM05D007900 ORTHO05D010306 1.9e-16 88.6 64 78.1
BolC7t46045H Brassica oleracea HOM05D007900 ORTHO05D010306 1.9e-16 88.6 64 78.1
A01p19010 Brassica napus HOM05D007900 ORTHO05D010306 4.3e-16 87.4 64 78.1
C01p23960 Brassica napus HOM05D007900 ORTHO05D010306 4.3e-16 87.4 64 78.1
BraA01t01844Z Brassica rapa HOM05D007900 ORTHO05D010306 4.3e-16 87.4 64 78.1
AL7G25050 Arabidopsis lyrata HOM05D007900 ORTHO05D010306 5.6e-16 87.0 64 76.6
BcaC06g32672 Brassica carinata HOM05D007900 ORTHO05D010306 9.5e-16 86.3 64 76.6
BcaC06g32675 Brassica carinata HOM05D007900 ORTHO05D010306 1.2e-15 85.9 69 69.6
C08p10350 Brassica napus HOM05D007900 ORTHO05D010306 1.2e-15 85.9 64 73.4
BcaB03g12541 Brassica carinata HOM05D007900 ORTHO05D010306 1.6e-15 85.5 64 75.0
BraA03t14808Z Brassica rapa HOM05D007900 ORTHO05D010306 1.6e-15 85.5 69 68.1
Carub.0007s1319 Capsella rubella HOM05D007900 ORTHO05D010306 1.6e-15 85.5 73 71.2
BcaC09g50557 Brassica carinata HOM05D007900 ORTHO05D010306 2.1e-15 85.1 64 76.6
BolC1t02345H Brassica oleracea HOM05D007900 ORTHO05D010306 2.1e-15 85.1 64 76.6
BcaC06g32673 Brassica carinata HOM05D007900 ORTHO05D010306 3.6e-15 84.3 64 75.0
BcaC07g38289 Brassica carinata HOM05D007900 ORTHO05D031835 6.2e-15 83.6 64 75.0
A08p20380 Brassica napus HOM05D007900 ORTHO05D010306 6.2e-15 83.6 64 75.0
BolC8t48718H Brassica oleracea HOM05D007900 ORTHO05D031835 6.2e-15 83.6 64 75.0
BraA08t33996Z Brassica rapa HOM05D007900 ORTHO05D010306 6.2e-15 83.6 64 75.0
BolC1t02340H Brassica oleracea HOM05D007900 ORTHO05D010306 8.0e-15 83.2 64 73.4
A03p57430 Brassica napus HOM05D007900 ORTHO05D010306 1.0e-14 82.8 64 73.4
A08p20390 Brassica napus HOM05D007900 ORTHO05D010306 1.0e-14 82.8 64 71.9
C08p10360 Brassica napus HOM05D007900 ORTHO05D031835 1.0e-14 82.8 64 73.4
BraA03t14810Z Brassica rapa HOM05D007900 ORTHO05D010306 1.0e-14 82.8 64 73.4
BcaC06g32670 Brassica carinata HOM05D007900 ORTHO05D010306 2.3e-14 81.6 64 73.4
Carub.0007s1317 Capsella rubella HOM05D007900 ORTHO05D010306 3.1e-14 81.3 65 75.4
CARHR235370 Cardamine hirsuta HOM05D007900 ORTHO05D010306 3.1e-14 81.3 64 70.3
THA.LOC109116602 Tarenaya hassleriana HOM05D007900 ORTHO05D010306 3.1e-14 81.3 64 67.2
C07p55640 Brassica napus HOM05D007900 ORTHO05D010306 8.9e-14 79.7 65 73.8
BolC7t46044H Brassica oleracea HOM05D007900 ORTHO05D010306 8.9e-14 79.7 65 73.8
BcaNung01647 Brassica carinata HOM05D007900 ORTHO05D010306 1.2e-13 79.3 64 70.3
THA.LOC109116085 Tarenaya hassleriana HOM05D007900 ORTHO05D010306 3.4e-13 77.8 67 65.7
THA.LOC109116601 Tarenaya hassleriana HOM05D007900 ORTHO05D010306 9.8e-13 76.3 67 64.2
THA.LOC109116608 Tarenaya hassleriana HOM05D007900 ORTHO05D010306 4.9e-12 73.9 65 64.6
AL7G25020 Arabidopsis lyrata HOM05D007900 ORTHO05D023649 8.3e-12 73.2 64 62.5
Carub.0007s1318 Capsella rubella HOM05D007900 ORTHO05D010306 8.3e-12 73.2 64 71.9
BcaC06g32674 Brassica carinata HOM05D007900 ORTHO05D010306 1.9e-11 72.0 64 65.6
C07p55630 Brassica napus HOM05D007900 ORTHO05D033326 1.9e-11 72.0 64 65.6
BolC1t02347H Brassica oleracea HOM05D007900 ORTHO05D023649 1.9e-11 72.0 65 63.1
BolC7t46043H Brassica oleracea HOM05D007900 ORTHO05D033326 1.9e-11 72.0 64 65.6
A03p57420 Brassica napus HOM05D007900 ORTHO05D033326 3.2e-11 71.2 64 65.6
BraA03t14809Z Brassica rapa HOM05D007900 ORTHO05D010306 3.2e-11 71.2 64 65.6
BraA01t01847Z Brassica rapa HOM05D007900 ORTHO05D023649 6.0e-10 67.0 65 60.0
C01p23970 Brassica napus HOM05D007900 ORTHO05D023649 5.0e-09 63.9 64 59.4
A01p18970 Brassica napus HOM05D007900 ORTHO05D100243 1.9e-08 62.0 43 76.7
A01p19040 Brassica napus HOM05D007900 ORTHO05D023649 1.9e-08 62.0 64 59.4
THA.LOC109116086 Tarenaya hassleriana HOM05D007900 ORTHO05D010306 1.9e-08 62.0 65 55.4
CARHR235380 Cardamine hirsuta HOM05D007900 ORTHO05D116190 4.0e-06 54.3 38 73.7


User provided reference genes

Program Settings