Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22106 Brassica carinata HOM05D000143 ORTHO05D026756 6.4e-36 153.7 84 100.0
C02p17690 Brassica napus HOM05D000143 ORTHO05D026756 7.8e-26 120.2 78 82.1
Thhalv10027903m.g Eutrema salsugineum HOM05D000143 ORTHO05D000072 9.2e-11 70.1 60 55.0
Sp7g01680 Schrenkiella parvula HOM05D000143 ORTHO05D000072 6.0e-10 67.4 61 49.2
Aa31LG9G1360 Aethionema arabicum HOM05D000143 ORTHO05D000072 1.0e-09 66.6 65 52.3
BcaB06g27466 Brassica carinata HOM05D000143 ORTHO05D000072 8.7e-09 63.5 70 44.3
C04p46930 Brassica napus HOM05D000143 ORTHO05D000072 8.7e-09 63.5 70 44.3
BolC4t26287H Brassica oleracea HOM05D000143 ORTHO05D000072 8.7e-09 63.5 70 44.3
CARHR261830 Cardamine hirsuta HOM05D000143 ORTHO05D000072 8.7e-09 63.5 69 49.3
Cpa.g.c36848 Carica papaya HOM05D000143 ORTHO05D000072 8.7e-09 63.5 65 52.3
A04p13180 Brassica napus HOM05D000143 ORTHO05D000072 1.1e-08 63.2 61 47.5
BraA04t16977Z Brassica rapa HOM05D000143 ORTHO05D000072 1.1e-08 63.2 61 47.5
THA.LOC104825289 Tarenaya hassleriana HOM05D000143 ORTHO05D000072 4.3e-08 61.2 74 44.6
AL7G49720 Arabidopsis lyrata HOM05D000143 ORTHO05D000072 1.6e-07 59.3 62 48.4
Gohir.D13G112700 Gossypium hirsutum HOM05D000143 ORTHO05D000072 1.6e-07 59.3 68 44.1
BolC2t07899H Brassica oleracea HOM05D000143 ORTHO05D026756 2.8e-07 58.5 58 65.5
Thecc.05G315100 Theobroma cacao HOM05D000143 ORTHO05D000072 2.8e-07 58.5 79 40.5
Ah.14g082080 Amaranthus hybridus HOM05D000143 ORTHO05D000072 3.6e-07 58.2 59 49.2
AT5G40260 Arabidopsis thaliana HOM05D000143 ORTHO05D000072 3.6e-07 58.2 59 49.2
Carub.0007s3537 Capsella rubella HOM05D000143 ORTHO05D000072 6.2e-07 57.4 59 47.5
PGR083G0425 Punica granatum HOM05D000143 ORTHO05D000072 6.2e-07 57.4 71 47.9
Actinidia35545 Actinidia chinensis HOM05D000143 ORTHO05D000072 1.1e-06 56.6 75 40.0
AL3G17410 Arabidopsis lyrata HOM05D000143 ORTHO05D000072 1.1e-06 56.6 57 49.1
AUR62022657 Chenopodium quinoa HOM05D000143 ORTHO05D000072 1.8e-06 55.8 59 44.1
Gorai.013G126600 Gossypium raimondii HOM05D000143 ORTHO05D000072 1.8e-06 55.8 68 42.6
Gohir.A13G110200 Gossypium hirsutum HOM05D000143 ORTHO05D000072 2.4e-06 55.5 68 41.2
COL.COLO4_10547 Corchorus olitorius HOM05D000143 ORTHO05D000072 5.2e-06 54.3 77 39.0
ECA236G0969 Erigeron canadensis HOM05D000776 ORTHO05D002281 6.9e-06 53.9 71 39.4
QL03p019814 Quercus lobata HOM05D000143 ORTHO05D000072 6.9e-06 53.9 70 40.0
SMO367G0924 Selaginella moellendorffii HOM05D000143 ORTHO05D000072 6.9e-06 53.9 68 41.2
Pp3c11_2580 Physcomitrium patens HOM05D000143 ORTHO05D000072 9.0e-06 53.5 66 39.4


User provided reference genes

Program Settings