Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22077 Brassica carinata HOM05D042020 ORTHO05D031895 9.8e-84 313.5 171 100.0
BcaNung04379 Brassica carinata HOM05D042020 ORTHO05D031895 2.2e-27 126.3 146 58.9
C02p16280 Brassica napus HOM05D002795 ORTHO05D003219 1.4e-13 80.5 62 77.4
A02p09750 Brassica napus HOM05D002795 ORTHO05D003219 3.4e-12 75.9 60 75.0
BcaC03g14247 Brassica carinata HOM05D002795 ORTHO05D003219 4.5e-12 75.5 60 75.0
BolC2t07729H Brassica oleracea HOM05D002795 ORTHO05D003219 1.0e-11 74.3 60 73.3
Sp6g17220 Schrenkiella parvula HOM05D002795 ORTHO05D003219 1.3e-11 73.9 60 70.0
BcaB05g22198 Brassica carinata HOM05D002795 ORTHO05D003219 1.7e-11 73.6 43 90.7
Aa31LG3G11270 Aethionema arabicum HOM05D002795 ORTHO05D003219 2.2e-11 73.2 68 63.2
AT5G55300 Arabidopsis thaliana HOM05D002795 ORTHO05D003219 2.2e-11 73.2 60 68.3
AL8G30840 Arabidopsis lyrata HOM05D002795 ORTHO05D003219 2.9e-11 72.8 60 70.0
Thhalv10012607m.g Eutrema salsugineum HOM05D002795 ORTHO05D003219 6.5e-11 71.6 60 70.0
Carub.0008s1563 Capsella rubella HOM05D002795 ORTHO05D003219 4.2e-10 68.9 60 66.7
CARHR268650 Cardamine hirsuta HOM05D002795 ORTHO05D003219 2.7e-09 66.2 60 61.7
Carub.0008s1564 Capsella rubella HOM05D042020 ORTHO05D031895 5.1e-08 62.0 65 61.5
THA.LOC104817691 Tarenaya hassleriana HOM05D002795 ORTHO05D003219 1.6e-06 57.0 69 46.4


User provided reference genes

Program Settings