Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21973 Brassica carinata HOM05D000607 ORTHO05D010164 6.2e-45 183.7 91 100.0
BcaB05g21974 Brassica carinata HOM05D000607 ORTHO05D010164 3.7e-37 157.9 91 86.8
A02p11650 Brassica napus HOM05D000607 ORTHO05D010164 1.3e-31 139.4 91 80.2
A02p11640 Brassica napus HOM05D000607 ORTHO05D010164 1.8e-31 139.0 91 78.0
BraA02t06228Z Brassica rapa HOM05D000607 ORTHO05D010164 3.9e-31 137.9 91 79.1
BcaC03g14506 Brassica carinata HOM05D000607 ORTHO05D010164 5.6e-30 134.0 91 76.9
C02p19470 Brassica napus HOM05D000607 ORTHO05D010164 1.4e-28 129.4 91 74.7
BcaC03g14511 Brassica carinata HOM05D000607 ORTHO05D010164 6.9e-28 127.1 91 73.6
BolC2t08079H Brassica oleracea HOM05D000607 ORTHO05D010164 9.0e-28 126.7 93 74.2
Sp6g14880 Schrenkiella parvula HOM05D000607 ORTHO05D010164 2.2e-21 105.5 91 61.5
C02p19420 Brassica napus HOM05D000607 ORTHO05D010164 1.8e-20 102.4 91 64.8
BolC2t08077H Brassica oleracea HOM05D000607 ORTHO05D010164 1.8e-20 102.4 91 64.8
CARHR265680 Cardamine hirsuta HOM05D000607 ORTHO05D010164 4.1e-20 101.3 92 62.0
BcaC03g14503 Brassica carinata HOM05D000607 ORTHO05D010164 1.2e-19 99.8 91 63.7
BcaB01g00906 Brassica carinata HOM05D000607 ORTHO05D010164 2.0e-19 99.0 74 75.7
Sp6g14900 Schrenkiella parvula HOM05D000607 ORTHO05D010164 3.8e-18 94.7 91 58.2
BcaB01g04211 Brassica carinata HOM05D000607 ORTHO05D010164 6.5e-18 94.0 94 56.4
BcaC03g14510 Brassica carinata HOM05D000607 ORTHO05D010164 2.5e-17 92.0 71 71.8
C02p19460 Brassica napus HOM05D000607 ORTHO05D010164 7.2e-17 90.5 71 71.8
BolC2t08080H Brassica oleracea HOM05D000607 ORTHO05D010164 7.2e-17 90.5 71 71.8
AT5G52760 Arabidopsis thaliana HOM05D000607 ORTHO05D010164 1.2e-16 89.7 91 59.3
A03p15560 Brassica napus HOM05D000607 ORTHO05D010164 1.2e-16 89.7 92 58.7
BraA03t10848Z Brassica rapa HOM05D000607 ORTHO05D010164 1.2e-16 89.7 92 58.7
C03p18170 Brassica napus HOM05D000607 ORTHO05D010164 1.6e-16 89.4 92 56.5
BolC3t14218H Brassica oleracea HOM05D000607 ORTHO05D010164 1.6e-16 89.4 92 56.5
AL8G27190 Arabidopsis lyrata HOM05D000607 ORTHO05D010164 3.0e-15 85.1 93 54.8
A10p10240 Brassica napus HOM05D000607 ORTHO05D010164 3.9e-15 84.7 96 53.1
BraA10t43103Z Brassica rapa HOM05D000607 ORTHO05D010164 3.9e-15 84.7 96 53.1
BraA10t43102Z Brassica rapa HOM05D000607 ORTHO05D010164 5.1e-15 84.3 96 53.1
Sp6g14870 Schrenkiella parvula HOM05D000607 ORTHO05D010164 5.1e-15 84.3 72 62.5
BcaB08g35624 Brassica carinata HOM05D000607 ORTHO05D010164 6.7e-15 84.0 96 52.1
BcaC01g06197 Brassica carinata HOM05D000607 ORTHO05D010164 6.7e-15 84.0 92 56.5
BcaC01g06201 Brassica carinata HOM05D000607 ORTHO05D010164 6.7e-15 84.0 92 56.5
C03p18190 Brassica napus HOM05D000607 ORTHO05D010164 6.7e-15 84.0 92 56.5
BolC3t14220H Brassica oleracea HOM05D000607 ORTHO05D010164 6.7e-15 84.0 92 56.5
Sp6g09500 Schrenkiella parvula HOM05D000607 ORTHO05D010164 6.7e-15 84.0 91 51.6
BcaC04g20551 Brassica carinata HOM05D000607 ORTHO05D010164 1.1e-14 83.2 96 52.1
A10p10250 Brassica napus HOM05D000607 ORTHO05D010164 1.1e-14 83.2 96 52.1
C09p42230 Brassica napus HOM05D000607 ORTHO05D010164 1.1e-14 83.2 96 52.1
BolC9t57104H Brassica oleracea HOM05D000607 ORTHO05D010164 1.1e-14 83.2 96 52.1
BcaC04g20552 Brassica carinata HOM05D000607 ORTHO05D010164 1.9e-14 82.4 96 52.1
C09p42220 Brassica napus HOM05D000607 ORTHO05D010164 1.9e-14 82.4 96 52.1
BolC9t57103H Brassica oleracea HOM05D000607 ORTHO05D010164 1.9e-14 82.4 96 52.1
BcaC03g14502 Brassica carinata HOM05D000607 ORTHO05D010164 3.3e-14 81.6 73 61.6
Thhalv10014994m.g Eutrema salsugineum HOM05D000607 ORTHO05D010164 3.3e-14 81.6 91 52.7
A02p11630 Brassica napus HOM05D000607 ORTHO05D010164 5.7e-14 80.9 72 63.9
AL8G27180 Arabidopsis lyrata HOM05D000607 ORTHO05D010164 1.3e-13 79.7 97 49.5
BcaC04g20541 Brassica carinata HOM05D000607 ORTHO05D010164 1.3e-13 79.7 70 60.0
C09p42340 Brassica napus HOM05D000607 ORTHO05D010164 1.3e-13 79.7 70 60.0
BolC9t57113H Brassica oleracea HOM05D000607 ORTHO05D010164 1.3e-13 79.7 70 60.0
Aa31LG3G9000 Aethionema arabicum HOM05D000607 ORTHO05D010164 2.2e-13 79.0 90 54.4
Carub.0008s1291 Capsella rubella HOM05D000607 ORTHO05D010164 4.8e-13 77.8 94 51.1
Carub.0008s1292 Capsella rubella HOM05D000607 ORTHO05D010164 1.1e-12 76.6 94 51.1
Aa31LG3G8990 Aethionema arabicum HOM05D000607 ORTHO05D010164 1.4e-12 76.3 87 57.5
Aa31LG3G9010 Aethionema arabicum HOM05D000607 ORTHO05D010164 2.6e-11 72.0 102 46.1
Carub.0008s1290 Capsella rubella HOM05D000607 ORTHO05D010164 5.9e-11 70.9 90 50.0
AT5G52750 Arabidopsis thaliana HOM05D000607 ORTHO05D010164 1.0e-10 70.1 97 47.4
BraA02t06224Z Brassica rapa HOM05D000607 ORTHO05D010164 1.3e-10 69.7 52 71.2
Carub.0008s1293 Capsella rubella HOM05D000607 ORTHO05D010164 1.3e-10 69.7 92 43.5
BcaB05g21977 Brassica carinata HOM05D000607 ORTHO05D010164 3.8e-10 68.2 72 55.6
Carub.0008s1289 Capsella rubella HOM05D000607 ORTHO05D010164 5.5e-09 64.3 99 44.4
C02p19400 Brassica napus HOM05D000607 ORTHO05D010164 1.2e-08 63.2 72 54.2
Aa31LG3G8020 Aethionema arabicum HOM05D000607 ORTHO05D010164 1.6e-08 62.8 90 40.0
CARHR265700 Cardamine hirsuta HOM05D000607 ORTHO05D010164 3.6e-08 61.6 99 41.4
Sp6g14910 Schrenkiella parvula HOM05D000607 ORTHO05D010164 5.1e-07 57.8 90 40.0
CARHR265710 Cardamine hirsuta HOM05D000607 ORTHO05D010164 4.4e-06 54.7 97 42.3


User provided reference genes

Program Settings