Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21892 Brassica carinata HOM05D009123 ORTHO05D011699 3.7e-85 318.2 161 100.0
BolC2t06034H Brassica oleracea HOM05D009123 ORTHO05D011699 5.1e-66 254.6 161 82.6
BcaC03g13061 Brassica carinata HOM05D009123 ORTHO05D011699 8.6e-66 253.8 161 82.6
C02p00340 Brassica napus HOM05D009123 ORTHO05D011699 8.6e-66 253.8 161 82.6
BraA02t04707Z Brassica rapa HOM05D009123 ORTHO05D011699 8.6e-66 253.8 161 81.4
Thhalv10014916m.g Eutrema salsugineum HOM05D009123 ORTHO05D011699 2.3e-58 229.2 161 72.7
Sp6g40410 Schrenkiella parvula HOM05D009123 ORTHO05D011699 4.5e-46 188.3 161 64.0
A08p14150 Brassica napus HOM05D009123 ORTHO05D011699 1.3e-40 170.2 177 53.1
BcaB04g18529 Brassica carinata HOM05D009123 ORTHO05D011699 3.1e-39 165.6 177 52.5
C03p81730 Brassica napus HOM05D009123 ORTHO05D011699 6.9e-39 164.5 177 53.1
BolC3t20444H Brassica oleracea HOM05D009123 ORTHO05D011699 6.9e-39 164.5 177 53.1
BcaC01g00598 Brassica carinata HOM05D009123 ORTHO05D011699 1.2e-38 163.7 177 52.5
BcaB02g10130 Brassica carinata HOM05D009123 ORTHO05D011699 2.2e-37 159.5 158 52.5
BraA08t33409Z Brassica rapa HOM05D009123 ORTHO05D011699 2.1e-35 152.9 151 53.0
A07p18490 Brassica napus HOM05D009123 ORTHO05D011699 7.9e-35 151.0 154 53.9
BraA07t29565Z Brassica rapa HOM05D009123 ORTHO05D011699 7.9e-35 151.0 154 53.9
BcaC02g10927 Brassica carinata HOM05D009123 ORTHO05D011699 1.8e-34 149.8 154 52.6
C04p23580 Brassica napus HOM05D009123 ORTHO05D011699 1.8e-34 149.8 154 52.6
CARHR119510 Cardamine hirsuta HOM05D009123 ORTHO05D011699 1.4e-28 130.2 166 48.8
Carub.0004s0766 Capsella rubella HOM05D009123 ORTHO05D011699 1.9e-25 119.8 169 46.7
A03p67140 Brassica napus HOM05D009123 ORTHO05D011699 3.3e-25 119.0 161 43.5
AL6G35100 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 1.3e-24 117.1 164 42.1
AT5G23820 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 4.1e-23 112.1 166 44.0
AT5G23840 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 6.9e-23 111.3 157 41.4
BolC4t24290H Brassica oleracea HOM05D009123 ORTHO05D011699 5.0e-21 105.1 151 41.1
AT2G26370 Arabidopsis thaliana HOM05D009123 ORTHO05D038737 7.2e-20 101.3 175 42.3
AT5G23830 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 2.1e-19 99.8 166 40.4
BraA01t02761Z Brassica rapa HOM05D009123 ORTHO05D011699 2.1e-19 99.8 103 48.5
Carub.0003s2749 Capsella rubella HOM05D009123 ORTHO05D038737 6.1e-19 98.2 178 42.7
AT1G45015 Arabidopsis thaliana HOM05D009123 ORTHO05D019748 6.7e-18 94.7 160 38.8
C03p20560 Brassica napus HOM05D025788 ORTHO05D019748 9.7e-17 90.9 149 39.6
C04p27520 Brassica napus HOM05D009123 ORTHO05D011699 1.1e-15 87.4 93 45.2
BcaC02g07810 Brassica carinata HOM05D030909 ORTHO05D027123 1.7e-13 80.1 141 42.6
AL6G35080 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 1.9e-12 76.6 75 50.7
BolC3t14436H Brassica oleracea HOM05D025788 ORTHO05D019748 5.5e-12 75.1 115 40.0
BolC3t14467H Brassica oleracea HOM05D025788 ORTHO05D019748 5.5e-12 75.1 115 40.0
BcaB06g28710 Brassica carinata HOM05D030909 ORTHO05D027123 1.0e-10 70.9 79 48.1
Thhalv10029005m.g Eutrema salsugineum HOM05D009123 ORTHO05D195657 1.4e-10 70.5 167 37.7
Carub.0005s0985 Capsella rubella HOM05D002139 ORTHO05D002264 6.7e-10 68.2 160 36.2
AL5G22100 Arabidopsis lyrata HOM05D002139 ORTHO05D002264 1.1e-09 67.4 136 38.2
AT3G44100 Arabidopsis thaliana HOM05D002139 ORTHO05D002264 1.5e-09 67.0 136 38.2
Sp5g17230 Schrenkiella parvula HOM05D002139 ORTHO05D002264 9.7e-09 64.3 136 38.2
Thhalv10003282m.g Eutrema salsugineum HOM05D009123 ORTHO05D019748 4.8e-08 62.0 163 30.1
A06p22210 Brassica napus HOM05D002139 ORTHO05D002264 8.2e-08 61.2 136 36.8
BcaB01g01201 Brassica carinata HOM05D002139 ORTHO05D002264 1.4e-07 60.5 136 36.0
BraA06t25309Z Brassica rapa HOM05D002139 ORTHO05D002264 2.4e-07 59.7 136 36.0
BcaC01g02081 Brassica carinata HOM05D002139 ORTHO05D002264 3.1e-07 59.3 136 36.0
C03p68780 Brassica napus HOM05D002139 ORTHO05D002264 3.1e-07 59.3 136 36.0
BolC3t19132H Brassica oleracea HOM05D002139 ORTHO05D002264 3.1e-07 59.3 136 36.0
CARHR152880 Cardamine hirsuta HOM05D002139 ORTHO05D002264 1.2e-06 57.4 136 36.0
Sp2g30780 Schrenkiella parvula HOM05D009123 ORTHO05D019748 1.2e-06 57.4 163 30.1
THA.LOC104810941 Tarenaya hassleriana HOM05D002139 ORTHO05D002264 2.6e-06 56.2 133 30.8


User provided reference genes

Program Settings